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3A9Z
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Crystal structure of ras selenocysteine lyase in complex with selenopropionate
分子名称: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Omi, R, Hirotsu, K.
登録日2009-11-09
公開日2010-03-16
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3A9Y
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Crystal structure of rat selenocysteine lyase in complex with L-cysteine
分子名称: CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
著者Omi, R, Hirotsu, K.
登録日2009-11-09
公開日2010-03-16
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
1J20
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with product
分子名称: ADENOSINE MONOPHOSPHATE, ARGININOSUCCINATE, Argininosuccinate Synthetase, ...
著者Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-12-24
公開日2003-04-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
1KA9
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Imidazole Glycerol Phosphate Synthase
分子名称: imidazole glycerol phosphate synthase
著者Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-01
公開日2002-12-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
1KH3
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with inhibitor
分子名称: ARGININE, ASPARTIC ACID, Argininosuccinate Synthetase, ...
著者goto, m, Hirotsu, k, miyahara, i, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-29
公開日2003-04-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of Argininosuccinate Synthetase in Enzyme-ATP Substrates and Enzyme-AMP Product Forms: STEREOCHEMISTRY OF THE CATALYTIC REACTION
J.Biol.Chem., 278, 2003
3A9X
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Crystal structure of rat selenocysteine lyase
分子名称: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
著者Omi, R, Hirotsu, K.
登録日2009-11-08
公開日2010-03-16
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
1IX7
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Aspartate Aminotransferase Active Site Mutant V39F maleate complex
分子名称: Aspartate Aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Hayashi, H, Mizuguchi, H, Miyahara, I, Nakajima, Y, Hirotsu, K, Kagamiyama, H.
登録日2002-06-14
公開日2002-07-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conformational change in aspartate aminotransferase on substrate binding induces strain in the catalytic group and enhances catalysis
J.BIOL.CHEM., 278, 2003
1KH2
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Argininosuccinate Synthetase
著者Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-29
公開日2002-04-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
1KH1
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase
分子名称: Argininosuccinate Synthetase, SULFATE ION
著者Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-29
公開日2002-04-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
2CWH
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH and pyrrole-2-carboxylate
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PYRROLE-2-CARBOXYLATE, delta1-piperideine-2-carboxylate reductase
著者Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
登録日2005-06-20
公開日2005-10-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
2CWF
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, delta1-piperideine-2-carboxylate reductase
著者Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
登録日2005-06-20
公開日2005-10-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
2DOU
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probable N-succinyldiaminopimelate aminotransferase (TTHA0342) from Thermus thermophilus HB8
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, probable N-succinyldiaminopimelate aminotransferase
著者Omi, R, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-05-03
公開日2006-11-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献probable N-succinyldiaminopimelate aminotransferase (TTHA0342) from Thermus thermophilus HB8
To be published
2A1H
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BU of 2a1h by Molmil
X-ray crystal structure of human mitochondrial branched chain aminotransferase (BCATm) complexed with gabapentin
分子名称: ACETIC ACID, PYRIDOXAL-5'-PHOSPHATE, [1-(AMINOMETHYL)CYCLOHEXYL]ACETIC ACID, ...
著者Goto, M, Miyahara, I, Hirotsu, K, Conway, M, Yennawar, N, Islam, M.M, Hutson, S.M.
登録日2005-06-20
公開日2005-09-06
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin.
J.Biol.Chem., 280, 2005
2DQ4
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BU of 2dq4 by Molmil
Crystal structure of threonine 3-dehydrogenase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L-threonine 3-dehydrogenase, ZINC ION
著者Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-05-19
公開日2007-06-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of threonine 3-dehydrogenase
To be Published
1G4X
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ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/R292L
分子名称: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Mizuguchi, H.
登録日2000-10-29
公開日2000-11-22
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Strain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase.
Biochemistry, 40, 2001
2EEO
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BU of 2eeo by Molmil
Crystal Structure of T.th. HB8 L-Aspartate-alpha-Decarboxylase Complexed with Fumarate
分子名称: Aspartate 1-decarboxylase, FUMARIC ACID, PYRUVIC ACID
著者Goto, M.
登録日2007-02-16
公開日2008-02-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of T.th. HB8 L-Aspartate-alpha-Decarboxylase
To be Published
1UIM
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BU of 1uim by Molmil
Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Orthorhombic Crystal Form
分子名称: PYRIDOXAL-5'-PHOSPHATE, Threonine Synthase
著者Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-07-17
公開日2003-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1UIN
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Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Trigonal Crystal Form
分子名称: PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, Threonine Synthase
著者Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-07-17
公開日2003-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1V2F
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Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with 3-phenylpropionate
分子名称: Glutamine Aminotransferase, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-15
公開日2004-07-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
1V72
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Crystal Structure of Phenylserine Aldolase from Pseudomonas Putida
分子名称: Aldolase, PYRIDOXAL-5'-PHOSPHATE, ZINC ION
著者Omi, R.
登録日2003-12-09
公開日2005-03-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal Structure of Phenylserine Aldolase from Pseudomonas Putida
To be Published
1VC3
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Crystal Structure of L-Aspartate-alpha-Decarboxylase
分子名称: L-Aspartate-alpha-Decarboxylase heavy chain, L-Aspartate-alpha-Decarboxylase light chain
著者Nakajima, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-04
公開日2005-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of L-Aspartate-alpha-Decarboxylase
TO BE PUBLISHED
1Y37
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Structure of Fluoroacetate Dehalogenase from Burkholderia sp. FA1
分子名称: Fluoroacetate Dehalogenase, MAGNESIUM ION
著者Omi, R.
登録日2004-11-23
公開日2006-02-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Fluoroacetate Dehalogenase FA1
To be Published
1V7C
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Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
分子名称: (2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID, THREONINE SYNTHASE
著者Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-12-16
公開日2003-12-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of threonine synthase from Thermus thermophilus HB8: conformational change, substrate recognition, and mechanism.
J.Biol.Chem., 278, 2003
1X2A
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Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-D-glutamic acid
分子名称: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID
著者Goto, M.
登録日2005-04-21
公開日2005-06-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
1X28
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Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-L-glutamic acid
分子名称: Aspartate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
著者Goto, M.
登録日2005-04-21
公開日2005-06-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005

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