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2AWJ
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BU of 2awj by Molmil
GFP R96M pre-cyclized intermediate in chromophore formation
分子名称: MAGNESIUM ION, green-fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWL
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BU of 2awl by Molmil
Mature R96K GFP mutant
分子名称: MAGNESIUM ION, green fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWK
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BU of 2awk by Molmil
GFP R96M mature chromophore
分子名称: MAGNESIUM ION, green fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWM
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BU of 2awm by Molmil
GFP R96A chromophore maturation recovery mutant R96A Q183R
分子名称: MAGNESIUM ION, green fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
43C9
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BU of 43c9 by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY
分子名称: PROTEIN (IMMUNOGLOBULIN (HEAVY CHAIN)), PROTEIN (IMMUNOGLOBULIN (LIGHT CHAIN))
著者Thayer, M.M, Getzoff, E.D, Roberts, V.A.
登録日1999-03-10
公開日1999-08-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
J.Mol.Biol., 291, 1999
43CA
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BU of 43ca by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY WITH BOUND P-NITROPHENOL
分子名称: P-NITROPHENOL, PROTEIN (IMMUNOGLOBULIN (HEAVY CHAIN)), PROTEIN (IMMUNOGLOBULIN (LIGHT CHAIN))
著者Thayer, M.M, Getzoff, E.D, Roberts, V.A.
登録日1999-03-10
公開日1999-08-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
J.Mol.Biol., 291, 1999
2AQN
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BU of 2aqn by Molmil
CU/ZN superoxide dismutase from neisseria meningitidis
分子名称: COPPER (I) ION, COPPER (II) ION, SULFATE ION, ...
著者DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
登録日2005-08-18
公開日2006-10-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献CU/ZN superoxide dismutase from neisseria meningitidis
To be Published
2APS
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BU of 2aps by Molmil
CU/ZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS PLEUROPNEUMONIAE
分子名称: COPPER (II) ION, PROTEIN (CU,ZN SUPEROXIDE DISMUTASE), ZINC ION
著者Forest, K.T, Langford, P.R, Kroll, J.S, Getzoff, E.D.
登録日1999-02-11
公開日1999-02-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cu,Zn superoxide dismutase structure from a microbial pathogen establishes a class with a conserved dimer interface.
J.Mol.Biol., 296, 2000
2AQT
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BU of 2aqt by Molmil
CU/ZN superoxide dismutase from neisseria meningitidis K91Q, K94Q double mutant
分子名称: COPPER (I) ION, COPPER (II) ION, SULFATE ION, ...
著者DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
登録日2005-08-18
公開日2006-10-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献CU/ZN superoxide dismutase from neisseria meningitidis K91Q, K94Q double mutant
To be Published
2FWQ
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BU of 2fwq by Molmil
Reduced enolate chromophore intermediate for Y66H GFP variant
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
登録日2006-02-02
公開日2006-03-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
1ZGP
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BU of 1zgp by Molmil
Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant K70M
分子名称: Red fluorescent protein drFP583
著者Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
登録日2005-04-21
公開日2005-08-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation.
Biochemistry, 44, 2005
1ZGO
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BU of 1zgo by Molmil
High Resolution Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed)
分子名称: Red fluorescent protein drFP583
著者Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
登録日2005-04-21
公開日2005-08-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation.
Biochemistry, 44, 2005
2AQP
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BU of 2aqp by Molmil
CU/ZN superoxide dismutase from neisseria meningitidis E73A mutant
分子名称: 1,2-ETHANEDIOL, COPPER (I) ION, Superoxide dismutase [Cu-Zn], ...
著者DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
登録日2005-08-18
公開日2006-10-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献CU/ZN superoxide dismutase from neisseria meningitidis E73A mutant
To be Published
2FZU
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BU of 2fzu by Molmil
Reduced enolate chromophore intermediate for GFP variant
分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
登録日2006-02-10
公開日2006-03-14
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
3F7K
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BU of 3f7k by Molmil
X-ray Crystal Structure of an Alvinella pompejana Cu,Zn Superoxide Dismutase- Hydrogen Peroxide Complex
分子名称: COPPER (I) ION, COPPER (II) ION, Copper,Zinc Superoxide Dismutase, ...
著者Shin, D.S, DiDonato, M, Barondeau, D.P, Getzoff, E.D, Tainer, J.A.
登録日2008-11-09
公開日2009-02-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Superoxide Dismutase from the Eukaryotic Thermophile Alvinella pompejana: Structures, Stability, Mechanism, and Insights into Amyotrophic Lateral Sclerosis.
J.Mol.Biol., 385, 2009
3F7L
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BU of 3f7l by Molmil
X-ray Crystal Structure of Alvinella pompejana Cu,Zn Superoxide Dismutase
分子名称: ACETIC ACID, COPPER (I) ION, COPPER (II) ION, ...
著者Shin, D.S, DiDonato, M, Barondeau, D.P, Getzoff, E.D, Tainer, J.A.
登録日2008-11-09
公開日2009-02-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Superoxide Dismutase from the Eukaryotic Thermophile Alvinella pompejana: Structures, Stability, Mechanism, and Insights into Amyotrophic Lateral Sclerosis.
J.Mol.Biol., 385, 2009
2G5Z
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BU of 2g5z by Molmil
Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis and decarboxylation
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2006-02-23
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
3FY4
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BU of 3fy4 by Molmil
(6-4) Photolyase Crystal Structure
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-4 photolyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Hitomi, K, Arvai, A.S, Tainer, J.A, Getzoff, E.D.
登録日2009-01-21
公開日2009-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Proc.Natl.Acad.Sci.USA, 106, 2009
1ZGQ
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BU of 1zgq by Molmil
Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant Q66M
分子名称: DI(HYDROXYETHYL)ETHER, Red fluorescent protein drFP583
著者Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
登録日2005-04-21
公開日2005-08-02
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation.
Biochemistry, 44, 2005
2AQR
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BU of 2aqr by Molmil
CU/ZN superoxide dismutase from neisseria meningitidis K91Q mutant
分子名称: COPPER (I) ION, COPPER (II) ION, Superoxide dismutase [Cu-Zn], ...
著者DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
登録日2005-08-18
公開日2006-10-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献CU/ZN superoxide dismutase from neisseria meningitidis K91Q mutant
To be Published
2AQQ
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BU of 2aqq by Molmil
CU/ZN superoxid dismutate from neisseria meningitidis K91E mutant
分子名称: COPPER (I) ION, COPPER (II) ION, SULFATE ION, ...
著者DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
登録日2005-08-18
公開日2006-10-31
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献CU/ZN superoxid dismutate from neisseria meningitidis K91E mutant
To be Published
2HFC
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BU of 2hfc by Molmil
Structure of S65T Y66F R96A GFP variant in precursor state
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2006-06-23
公開日2007-03-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
2HCG
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BU of 2hcg by Molmil
Structure of S65T Y66F GFP variant after cyclization, carbon-carbon bond cleavage, and oxygen incorporation reactions
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2006-06-16
公開日2007-03-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
2AQS
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BU of 2aqs by Molmil
CU/ZN superoxide dismutase from neisseria meningitidis K91E, K94E double mutant
分子名称: COPPER (I) ION, COPPER (II) ION, Superoxide dismutase [Cu-Zn], ...
著者DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
登録日2005-08-18
公開日2006-10-31
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CU/ZN superoxide dismutase from neisseria meningitidis K91E, K94E double mutant
To be Published
2HGD
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BU of 2hgd by Molmil
Structure of S65A Y66F GFP variant with an oxidized chromophore
分子名称: Green fluorescent protein
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2006-06-26
公開日2007-03-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007

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