5ZHX
 
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3VON
 | | Crystalstructure of the ubiquitin protease | | 分子名称: | Ubiquitin thioesterase OTUB1, Ubiquitin-conjugating enzyme E2 N, Ubiquitin-conjugating enzyme E2 variant 2 | | 著者 | Sato, Y, Fukai, S. | | 登録日 | 2012-01-30 | | 公開日 | 2012-05-30 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (3.15 Å) | | 主引用文献 | Molecular basis of Lys-63-linked polyubiquitination inhibition by the interaction between human deubiquitinating enzyme OTUB1 and ubiquitin-conjugating enzyme UBC13.
J.Biol.Chem., 287, 2012
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3VLC
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6JWI
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6JWJ
 | | Npl4 in complex with Ufd1 | | 分子名称: | GLYCEROL, Nuclear protein localization protein 4, Peptide from Ubiquitin fusion degradation protein 1, ... | | 著者 | Sato, Y, Fukai, S. | | 登録日 | 2019-04-20 | | 公開日 | 2019-12-25 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.58 Å) | | 主引用文献 | Structural insights into ubiquitin recognition and Ufd1 interaction of Npl4.
Nat Commun, 10, 2019
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6JWH
 | | Yeast Npl4 zinc finger, MPN and CTD domains | | 分子名称: | GLYCEROL, Nuclear protein localization protein 4, ZINC ION | | 著者 | Sato, Y, Fukai, S. | | 登録日 | 2019-04-20 | | 公開日 | 2019-12-25 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (1.72000253 Å) | | 主引用文献 | Structural insights into ubiquitin recognition and Ufd1 interaction of Npl4.
Nat Commun, 10, 2019
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3WXG
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3WXE
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3WXF
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3B2E
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2Z6E
 | | Crystal Structure of Human DAAM1 FH2 | | 分子名称: | Disheveled-associated activator of morphogenesis 1 | | 著者 | Yamashita, M, Higashi, T, Sato, Y, Shirakawa, R, Kita, T, Horiuchi, H, Fukai, S, Nureki, O. | | 登録日 | 2007-07-31 | | 公開日 | 2008-05-27 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Crystal structure of human DAAM1 formin homology 2 domain
Genes Cells, 12, 2007
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2D1P
 | | crystal structure of heterohexameric TusBCD proteins, which are crucial for the tRNA modification | | 分子名称: | Hypothetical UPF0116 protein yheM, Hypothetical UPF0163 protein yheN, Hypothetical protein yheL, ... | | 著者 | Numata, T, Fukai, S, Ikeuchi, Y, Suzuki, T, Nureki, O. | | 登録日 | 2005-08-30 | | 公開日 | 2006-02-28 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | | 主引用文献 | Structural Basis for Sulfur Relay to RNA Mediated by Heterohexameric TusBCD Complex
Structure, 14, 2006
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2DR8
 | | Complex structure of CCA-adding enzyme with tRNAminiDC and CTP | | 分子名称: | CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | | 登録日 | 2006-06-08 | | 公開日 | 2006-11-14 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
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2DER
 | | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state | | 分子名称: | PHOSPHATE ION, SULFATE ION, tRNA, ... | | 著者 | Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O. | | 登録日 | 2006-02-17 | | 公開日 | 2006-08-15 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | | 主引用文献 | Snapshots of tRNA sulphuration via an adenylated intermediate
Nature, 442, 2006
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2DET
 | | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the pre-reaction state | | 分子名称: | SULFATE ION, tRNA, tRNA-specific 2-thiouridylase mnmA | | 著者 | Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O. | | 登録日 | 2006-02-17 | | 公開日 | 2006-08-15 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | | 主引用文献 | Snapshots of tRNA sulphuration via an adenylated intermediate
Nature, 442, 2006
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2DR9
 | | Complex structure of CCA-adding enzyme with tRNAminiDCC | | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (34-MER) | | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | | 登録日 | 2006-06-08 | | 公開日 | 2006-11-14 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
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2EQB
 | | Crystal structure of the Rab GTPase Sec4p, the Sec2p GEF domain, and phosphate complex | | 分子名称: | PHOSPHATE ION, Rab guanine nucleotide exchange factor SEC2, Ras-related protein SEC4 | | 著者 | Sato, Y, Fukai, S, Ishitani, R, Nureki, O. | | 登録日 | 2007-03-30 | | 公開日 | 2007-05-22 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Crystal structure of the Sec4p{middle dot}Sec2p complex in the nucleotide exchanging intermediate state
Proc.Natl.Acad.Sci.Usa, 104, 2007
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2DEU
 | | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the adenylated intermediate state | | 分子名称: | ADENOSINE MONOPHOSPHATE, SULFATE ION, tRNA, ... | | 著者 | Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O. | | 登録日 | 2006-02-17 | | 公開日 | 2006-08-15 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | | 主引用文献 | Snapshots of tRNA sulphuration via an adenylated intermediate
Nature, 442, 2006
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2DRA
 | | Complex structure of CCA-adding enzyme with tRNAminiDCC and ATP | | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, CCA-adding enzyme, MAGNESIUM ION, ... | | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | | 登録日 | 2006-06-08 | | 公開日 | 2006-11-14 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
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2CSX
 | | Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met) | | 分子名称: | Methionyl-tRNA synthetase, RNA (75-MER) | | 著者 | Nakanishi, K, Ogiso, Y, Nakama, T, Fukai, S, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-05-23 | | 公開日 | 2005-09-20 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structural basis for anticodon recognition by methionyl-tRNA synthetase.
Nat.Struct.Mol.Biol., 12, 2005
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2CT8
 | | Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met) and methionyl-adenylate anologue | | 分子名称: | 5'-O-[(L-METHIONYL)-SULPHAMOYL]ADENOSINE, Methionyl-tRNA synthetase, RNA (74-MER) | | 著者 | Nakanishi, K, Ogiso, Y, Nakama, T, Fukai, S, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-05-23 | | 公開日 | 2005-09-20 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structural basis for anticodon recognition by methionyl-tRNA synthetase.
Nat.Struct.Mol.Biol., 12, 2005
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2DR5
 | | Complex structure of CCA adding enzyme with mini-helix lacking CCA | | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (32-MER) | | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | | 登録日 | 2006-06-08 | | 公開日 | 2006-10-31 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
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2DRB
 | | Complex structure of CCA-adding enzyme with tRNAminiCCA | | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (35-MER) | | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | | 登録日 | 2006-06-08 | | 公開日 | 2006-11-14 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
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2DR7
 | | Complex structure of CCA-adding enzyme with tRNAminiDC | | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (33-MER) | | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | | 登録日 | 2006-06-08 | | 公開日 | 2006-11-14 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
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2DVI
 | | Complex structure of CCA-adding enzyme, mini-DCC and CTP | | 分子名称: | CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | | 登録日 | 2006-07-31 | | 公開日 | 2006-11-14 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.61 Å) | | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
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