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6LEL
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BU of 6lel by Molmil
Structure of E. coli beta-glucuronidase complex with C6-hexyl uronic isofagomine
分子名称: (2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, Beta-D-glucuronidase
著者Lin, H.-Y, Kuo, Y.-H, Lin, C.-H.
登録日2019-11-25
公開日2021-01-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.498 Å)
主引用文献Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
2KIU
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BU of 2kiu by Molmil
Solution structure and backbone dynamics of the DNA-binding domain of FOXP1: Insight into its domain swapping
分子名称: Forkhead box protein P1
著者Chuang, W, Chu, Y.
登録日2009-05-11
公開日2010-04-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of the DNA-binding domain of FOXP1: Insight into its domain swapping and DNA binding.
Protein Sci., 20, 2011
9GIJ
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BU of 9gij by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound 5
分子名称: (2~{R})-3-(4-chlorophenyl)-2-[2-[(2~{R})-1-isoquinolin-4-ylcarbonylpyrrolidin-2-yl]ethanoyl-methyl-amino]-~{N}-methyl-propanamide, 3C-like proteinase nsp5
著者Prasad, A, Schmitt, A, Preuss, F, Maskos, K, Wang, X, Gotchev, D, Konz Makino, D.L.
登録日2024-08-19
公開日2024-11-06
実験手法X-RAY DIFFRACTION (1.476 Å)
主引用文献Rational Design of Macrocyclic Noncovalent Inhibitors of SARS-CoV-2 M pro from a DNA-Encoded Chemical Library Screening Hit That Demonstrate Potent Inhibition against Pan-Coronavirus Homologues and Nirmatrelvir-Resistant Variants.
J.Med.Chem., 2024
9GIL
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BU of 9gil by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound 12
分子名称: (7~{R},11~{R},19~{E})-11-[(4-chlorophenyl)methyl]-13-oxa-3,10,23-triazatricyclo[19.3.1.0^{3,7}]pentacosa-1(24),19,21(25),22-tetraene-2,9,12-trione, 1,2-ETHANEDIOL, 3C-like proteinase nsp5, ...
著者Schmitt, A, Preuss, F, Prasad, A, Maskos, K, Wang, X, Gotchev, D, Konz Makino, D.L.
登録日2024-08-19
公開日2024-11-06
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Rational Design of Macrocyclic Noncovalent Inhibitors of SARS-CoV-2 M pro from a DNA-Encoded Chemical Library Screening Hit That Demonstrate Potent Inhibition against Pan-Coronavirus Homologues and Nirmatrelvir-Resistant Variants.
J.Med.Chem., 2024
6JZ6
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BU of 6jz6 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine
分子名称: (2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.605 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6L6E
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BU of 6l6e by Molmil
Human PDE5 catalytic core in complex with avanafil
分子名称: 4-[(3-chloranyl-4-methoxy-phenyl)methylamino]-2-[(2S)-2-(hydroxymethyl)pyrrolidin-1-yl]-N-(pyrimidin-2-ylmethyl)pyrimid ine-5-carboxamide, MAGNESIUM ION, SULFATE ION, ...
著者Hsieh, C.M, Chan, N.L.
登録日2019-10-28
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure of Human Phosphodiesterase 5A1 Complexed with Avanafil Reveals Molecular Basis of Isoform Selectivity and Guidelines for Targeting alpha-Helix Backbone Oxygen by Halogen Bonding.
J.Med.Chem., 63, 2020
1RLA
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BU of 1rla by Molmil
THREE-DIMENSIONAL STRUCTURE OF RAT LIVER ARGINASE, THE BINUCLEAR MANGANESE METALLOENZYME OF THE UREA CYCLE
分子名称: ARGINASE, MANGANESE (II) ION
著者Kanyo, Z, Scolnick, L, Ash, D, Christianson, D.W.
登録日1996-08-15
公開日1997-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a unique binuclear manganese cluster in arginase.
Nature, 383, 1996
3GRL
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BU of 3grl by Molmil
Crystal Structure of the Monomer of the p115 Tether Globular Head Domain
分子名称: General vesicular transport factor p115, PHOSPHATE ION
著者An, Y, Elsliger, M.A, Wilson, I.A.
登録日2009-03-25
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional analysis of the globular head domain of p115 provides insight into membrane tethering.
J.Mol.Biol., 391, 2009
3GQ2
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BU of 3gq2 by Molmil
Crystal Structure of the Dimer of the p115 Tether Globular Head Domain
分子名称: General vesicular transport factor p115
著者An, Y, Elsliger, M.A, Wilson, I.A.
登録日2009-03-23
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural and functional analysis of the globular head domain of p115 provides insight into membrane tethering.
J.Mol.Biol., 391, 2009
6LDC
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BU of 6ldc by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with C6-nonyl uronic isofagomine
分子名称: (2~{S},3~{S},4~{R},5~{R})-2-nonyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, LacZ1 Beta-galactosidase
著者Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
登録日2019-11-20
公開日2021-01-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.181 Å)
主引用文献Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6J03
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BU of 6j03 by Molmil
Crystal structure of a cyclase mutant in apo form
分子名称: 12-epi-hapalindole U synthase, CALCIUM ION, amino({3-[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]propyl}amino)methaniminium
著者Tang, X.K, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2018-12-20
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural insights into the calcium dependence of Stig cyclases.
Rsc Adv, 9, 2019
2HH3
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BU of 2hh3 by Molmil
Solution structure of the third KH domain of KSRP
分子名称: KH-type splicing regulatory protein
著者Garcia-Mayoral, M.F.
登録日2006-06-27
公開日2007-05-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The Structure of the C-Terminal KH Domains of KSRP Reveals a Noncanonical Motif Important for mRNA Degradation.
Structure, 15, 2007
2HH2
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BU of 2hh2 by Molmil
Solution structure of the fourth KH domain of KSRP
分子名称: KH-type splicing regulatory protein
著者Garcia-Mayoral, M.F.
登録日2006-06-27
公開日2007-05-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The Structure of the C-Terminal KH Domains of KSRP Reveals a Noncanonical Motif Important for mRNA Degradation.
Structure, 15, 2007
5J7J
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BU of 5j7j by Molmil
NMR Derived Structure of Ca2+ Calmodulin bound to Phosphorylated PSD-95
分子名称: CALCIUM ION, Calmodulin, Disks large homolog 4
著者Turner, M.L, Ames, J.B, Anderson, D.E.
登録日2016-04-06
公開日2017-10-25
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Ca2+/calmodulin binding to PSD-95 mediates homeostatic synaptic scaling down.
Embo J., 37, 2018
6JZ8
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BU of 6jz8 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone
分子名称: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.583 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ5
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BU of 6jz5 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid
分子名称: Beta-glucuronidase, beta-D-glucopyranuronic acid
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ3
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BU of 6jz3 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin
分子名称: (2~{S},3~{R},4~{R},5~{S})-3,4,5-tris(oxidanyl)piperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-05-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ2
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BU of 6jz2 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution
分子名称: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ4
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BU of 6jz4 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam
分子名称: (2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxopiperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-03
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.712 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ1
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BU of 6jz1 by Molmil
Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ7
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BU of 6jz7 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine
分子名称: (3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-1-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
5EK3
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BU of 5ek3 by Molmil
Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with NLG919 analogue
分子名称: (1~{R})-1-cyclohexyl-2-[(5~{S})-5~{H}-imidazo[1,5-b]isoindol-5-yl]ethanol, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Peng, Y.H, Wu, J.S, Wu, S.Y.
登録日2015-11-03
公開日2015-12-23
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.209 Å)
主引用文献Important Hydrogen Bond Networks in Indoleamine 2,3-Dioxygenase 1 (IDO1) Inhibitor Design Revealed by Crystal Structures of Imidazoleisoindole Derivatives with IDO1
J.Med.Chem., 59, 2016
5EK2
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BU of 5ek2 by Molmil
Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with NLG919 analogue
分子名称: 1-cyclohexyl-2-[(5~{S})-6-fluoranyl-5~{H}-imidazo[1,5-b]isoindol-5-yl]ethanone, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Peng, Y.H, Wu, J.S, Wu, S.Y.
登録日2015-11-03
公開日2015-12-23
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Important Hydrogen Bond Networks in Indoleamine 2,3-Dioxygenase 1 (IDO1) Inhibitor Design Revealed by Crystal Structures of Imidazoleisoindole Derivatives with IDO1
J.Med.Chem., 59, 2016
5ETW
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BU of 5etw by Molmil
Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with NLG919 analogue
分子名称: (1~{R})-1-cyclohexyl-2-pyrido[3,4-b]indol-9-yl-ethanol, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Wu, S.Y, Peng, Y.H, Wu, J.S.
登録日2015-11-18
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Important Hydrogen Bond Networks in Indoleamine 2,3-Dioxygenase 1 (IDO1) Inhibitor Design Revealed by Crystal Structures of Imidazoleisoindole Derivatives with IDO1.
J.Med.Chem., 59, 2016
5EK4
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BU of 5ek4 by Molmil
Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with NLG919 analogue
分子名称: (1~{R})-1-cyclohexyl-2-[(5~{S})-6-fluoranyl-5~{H}-imidazo[1,5-b]isoindol-5-yl]ethanol, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Wu, S.Y, Peng, Y.H, Wu, J.S.
登録日2015-11-03
公開日2015-12-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Important Hydrogen Bond Networks in Indoleamine 2,3-Dioxygenase 1 (IDO1) Inhibitor Design Revealed by Crystal Structures of Imidazoleisoindole Derivatives with IDO1
J.Med.Chem., 59, 2016

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