Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3O1M
DownloadVisualize
BU of 3o1m by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-21
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1V
DownloadVisualize
BU of 3o1v by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDJ)P*AP*CP*CP*GP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1P
DownloadVisualize
BU of 3o1p by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-21
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3S5A
DownloadVisualize
BU of 3s5a by Molmil
ABH2 cross-linked to undamaged dsDNA-2 with cofactors
分子名称: 2-OXOGLUTARIC ACID, 5'-D(*CP*TP*GP*TP*CP*TP*CP*AP*CP*TP*GP*TP*CP*G)-3', 5'-D(*TP*CP*GP*AP*CP*AP*GP*TP*GP*AP*GP*AP*CP*A)-3', ...
著者Yi, C, Chen, B, Qi, B, Ramirez, B, Zhang, W, Jia, G, Zhang, L, Li, C.Q, Dinner, A.R, Yang, C.-G, He, C.
登録日2011-05-21
公開日2012-06-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3S57
DownloadVisualize
BU of 3s57 by Molmil
ABH2 cross-linked with undamaged dsDNA-1 containing cofactors
分子名称: 2-OXOGLUTARIC ACID, 5'-D(*CP*TP*GP*TP*CP*AP*TP*CP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*TP*GP*AP*CP*A)-3', ...
著者Yi, C, Chen, B, Qi, B, Ramirez, B, Zhang, W, Jia, G, Zhang, L, Li, C.Q, Dinner, A.R, Yang, C.-G, He, C.
登録日2011-05-20
公開日2012-06-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3MEX
DownloadVisualize
BU of 3mex by Molmil
Crystal structure of MexR in oxidized state
分子名称: Multidrug resistance operon repressor
著者Chen, H, Yi, C, Zhang, J, Zhang, W, Yang, C.-G, He, C.
登録日2010-04-01
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into the oxidation-sensing mechanism of the antibiotic resistance of regulator MexR
Embo Rep., 11, 2010
3O1S
DownloadVisualize
BU of 3o1s by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDQ)P*AP*CP*CP*GP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1O
DownloadVisualize
BU of 3o1o by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-21
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase
Nature, 468, 2010
3O1T
DownloadVisualize
BU of 3o1t by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDU)P*AP*CP*CP*GP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-22
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1R
DownloadVisualize
BU of 3o1r by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
著者Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
登録日2010-07-21
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
4FX0
DownloadVisualize
BU of 4fx0 by Molmil
Crystal structure of M. tuberculosis transcriptional regulator MosR
分子名称: PROBABLE TRANSCRIPTIONAL REPRESSOR PROTEIN
著者Brugarolas, P, He, C.
登録日2012-07-02
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6981 Å)
主引用文献The Oxidation-sensing Regulator (MosR) Is a New Redox-dependent Transcription Factor in Mycobacterium tuberculosis.
J.Biol.Chem., 287, 2012
4FX4
DownloadVisualize
BU of 4fx4 by Molmil
Crystal structure of M. tuberculosis transcriptional regulator MOSR (Rv1049) in compex with DNA
分子名称: DNA (5'-D(*TP*AP*CP*AP*GP*AP*TP*TP*CP*GP*TP*GP*TP*AP*GP*CP*TP*AP*CP*AP*CP*GP*AP*AP*TP*CP*TP*GP*T)-3'), PHOSPHATE ION, PROBABLE TRANSCRIPTIONAL REPRESSOR PROTEIN
著者Brugarolas, P, He, C.
登録日2012-07-02
公開日2012-09-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.1001 Å)
主引用文献The Oxidation-sensing Regulator (MosR) Is a New Redox-dependent Transcription Factor in Mycobacterium tuberculosis.
J.Biol.Chem., 287, 2012
4GXL
DownloadVisualize
BU of 4gxl by Molmil
The crystal structure of Galectin-8 C-CRD in complex with NDP52
分子名称: GLYCEROL, Galectin-8, Peptide from Calcium-binding and coiled-coil domain-containing protein 2
著者Li, S, Wandel, M.P, Li, F, Liu, Z, He, C, Wu, J, Shi, Y, Randow, F.
登録日2012-09-04
公開日2013-05-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.023 Å)
主引用文献Sterical hindrance promotes selectivity of the autophagy cargo receptor NDP52 for the danger receptor galectin-8 in antibacterial autophagy
Sci.Signal., 6, 2013
4HQM
DownloadVisualize
BU of 4hqm by Molmil
The crystal structure of QsrR-menadione complex
分子名称: 2-methylnaphthalene-1,4-diol, QsrR protein
著者Ji, Q, Zhang, L, Jones, M.B, Sun, F, Deng, X, Liang, H, Brugarolas, P, Gao, N, Peterson, S.N, Lan, L, Bae, T, He, C.
登録日2012-10-25
公開日2013-03-06
最終更新日2013-05-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Molecular mechanism of quinone signaling mediated through S-quinonization of a YodB family repressor QsrR.
Proc.Natl.Acad.Sci.USA, 110, 2013
4N4R
DownloadVisualize
BU of 4n4r by Molmil
Structure basis of lipopolysaccharide biogenesis
分子名称: CACODYLATE ION, LPS-assembly lipoprotein LptE, LPS-assembly protein LptD, ...
著者Dong, H, Xiang, Q, Wang, Z, Paterson, N.G, He, C, Zhang, Y, Wang, W, Dong, C.
登録日2013-10-08
公開日2014-06-25
最終更新日2014-07-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for outer membrane lipopolysaccharide insertion.
Nature, 511, 2014
2BV6
DownloadVisualize
BU of 2bv6 by Molmil
Crystal structure of MgrA, a global regulator and major virulence determinant in Staphylococcus aureus
分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR MGRA, SULFATE ION
著者Chen, P.R, Bae, T, Williams, W.A, Duguid, E.M, Rice, P.A, Schneewind, O, He, C.
登録日2005-06-22
公開日2006-09-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献An Oxidation-Sensing Mechanism is Used by the Global Regulator Mgra in Staphylococcus Aureus.
Nat.Chem.Biol., 2, 2006
4YWZ
DownloadVisualize
BU of 4ywz by Molmil
Crystal structure of the extracellular receptor domain of the essential sensor kinase WalK from Staphylococcus aureus
分子名称: Sensor protein kinase WalK
著者Ji, Q, Wawrzak, Z, He, C.
登録日2015-03-21
公開日2016-03-30
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.
Nat Commun, 7, 2016
4QC2
DownloadVisualize
BU of 4qc2 by Molmil
Crystal structure of lipopolysaccharide transport protein LptB in complex with ATP and Magnesium ions
分子名称: ABC transporter related protein, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Wang, Z, Xiang, Q, Zhu, X, Dong, H, He, C, Wang, H, Zhang, Y, Wang, W, Dong, C.
登録日2014-05-09
公開日2014-10-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural and functional studies of conserved nucleotide-binding protein LptB in lipopolysaccharide transport.
Biochem.Biophys.Res.Commun., 452, 2014
1YFH
DownloadVisualize
BU of 1yfh by Molmil
wt Human O6-Alkylguanine-DNA Alkyltransferase Bound To DNA Containing an Alkylated Cytosine
分子名称: 5'-D(*CP*CP*TP*AP*CP*AP*CP*AP*CP*AP*TP*CP*CP*AP*CP*A)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*(XCY)P*GP*TP*GP*TP*AP*GP*GP*T)-3', Methylated-DNA--protein-cysteine methyltransferase, ...
著者Duguid, E.M, Rice, P.A, He, C.
登録日2004-12-31
公開日2005-12-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献The structure of the human AGT protein bound to DNA and its implications for damage detection.
J.Mol.Biol., 350, 2005
3HSE
DownloadVisualize
BU of 3hse by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in reduced form
分子名称: HTH-type transcriptional regulator sarZ
著者Poor, C.B, Duguid, E, Rice, P.A, He, C.
登録日2009-06-10
公開日2009-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009
3HSR
DownloadVisualize
BU of 3hsr by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in mixed disulfide form
分子名称: ACETATE ION, GLYCEROL, HTH-type transcriptional regulator sarZ, ...
著者Poor, C.B, Duguid, E, Rice, P.A, He, C.
登録日2009-06-10
公開日2009-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009
3HRM
DownloadVisualize
BU of 3hrm by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in sulfenic acid form
分子名称: HTH-type transcriptional regulator sarZ
著者Poor, C.B, Duguid, E, Rice, P.A, He, C.
登録日2009-06-09
公開日2009-07-07
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009
3R26
DownloadVisualize
BU of 3r26 by Molmil
Perrhenate Binding to Molybdate Binding Protein
分子名称: Molybdate-binding periplasmic protein, PERRHENATE
著者Aryal, B.P, Brugarolas, P, He, C.
登録日2011-03-13
公開日2012-02-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Binding of ReO(4) (-) with an engineered MoO (4) (2-)-binding protein: towards a new approach in radiopharmaceutical applications.
J.Biol.Inorg.Chem., 17, 2012
3RKP
DownloadVisualize
BU of 3rkp by Molmil
Crystal structure of BcpA*(D312A), the major pilin subunit of Bacillus cereus
分子名称: Collagen adhesion protein
著者Hendrickx, A.P, Poor, C.B, Jureller, J.E, Budzik, J.M, He, C, Schneewind, O.
登録日2011-04-18
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.243 Å)
主引用文献Isopeptide bonds of the major pilin protein BcpA influence pilus structure and bundle formation on the surface of Bacillus cereus.
Mol.Microbiol., 85, 2012
3SZ6
DownloadVisualize
BU of 3sz6 by Molmil
IsdX1, an anthrax hemophore
分子名称: CHLORIDE ION, Conserved domain protein, GLYCEROL
著者Poor, C.B, Maresso, A.W, Murphy, F, He, C.
登録日2011-07-18
公開日2012-03-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Differential function of lip residues in the mechanism and biology of an anthrax hemophore.
Plos Pathog., 8, 2012

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon