Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3VA2
DownloadVisualize
BU of 3va2 by Molmil
Crystal structure of human Interleukin-5 in complex with its alpha receptor
分子名称: Interleukin-5, Interleukin-5 receptor subunit alpha
著者Kusano, S, Kukimoto-Niino, M, Shirouzu, M, Yokoyama, S.
登録日2011-12-28
公開日2012-07-25
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structural basis of interleukin-5 dimer recognition by its alpha receptor
Protein Sci., 21, 2012
2L9N
DownloadVisualize
BU of 2l9n by Molmil
Structure of the human Shwachman-Bodian-Diamond syndrome (SBDS) protein
分子名称: Ribosome maturation protein SBDS
著者Hilcenko, C, Freund, S.M.V, Warren, A.J.
登録日2011-02-21
公開日2011-05-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Uncoupling of GTP hydrolysis from eIF6 release on the ribosome causes Shwachman-Diamond syndrome.
Genes Dev., 25, 2011
4G3D
DownloadVisualize
BU of 4g3d by Molmil
Crystal structure of human NF-kappaB inducing kinase (NIK)
分子名称: MAGNESIUM ION, NF-kappa-beta-inducing kinase
著者Hymowitz, S.G, de Leon-Boenig, G.
登録日2012-07-13
公開日2012-08-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of the catalytic domain of the NF-kappaB inducing kinase reveals a narrow but flexible active site.
Structure, 20, 2012
4H0P
DownloadVisualize
BU of 4h0p by Molmil
Crystal Structure of Acetate Kinase from Cryptococcus neoformans
分子名称: acetate kinase
著者Thaker, T.M, Iverson, T.M.
登録日2012-09-09
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.894 Å)
主引用文献Crystal structures of acetate kinases from the eukaryotic pathogens Entamoeba histolytica and Cryptococcus neoformans.
J.Struct.Biol., 181, 2013
7Z6Q
DownloadVisualize
BU of 7z6q by Molmil
Cryo-EM structure of the whole photosynthetic complex from the green sulfur bacteria
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BACTERIOCHLOROPHYLL A, Bacteriochlorophyll A isomer, ...
著者Xie, H, Tsiotis, G.
登録日2022-03-14
公開日2023-02-08
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure of the whole photosynthetic reaction center apparatus from the green sulfur bacterium Chlorobaculum tepidum.
Proc.Natl.Acad.Sci.USA, 120, 2023
7EMW
DownloadVisualize
BU of 7emw by Molmil
Crystal Structure of the HasAp V37G/K59Q Mutant Capturing Iron Tetraphenylporphyrin
分子名称: GLYCEROL, Heme acquisition protein HasAp, [5,10,15,20-tetraphenylporphyrinato(2-)-kappa~4~N~21~,N~22~,N~23~,N~24~]iron
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMQ
DownloadVisualize
BU of 7emq by Molmil
Crystal Structure of HasAp Capturing Manganese Tetraphenylporphyrin
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, ...
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMS
DownloadVisualize
BU of 7ems by Molmil
Crystal Structure of the HasAp L85A Mutant Capturing Iron Tetraphenylporphyrin
分子名称: GLYCEROL, Heme acquisition protein HasAp, [5,10,15,20-tetraphenylporphyrinato(2-)-kappa~4~N~21~,N~22~,N~23~,N~24~]iron
著者Shisaka, Y, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMP
DownloadVisualize
BU of 7emp by Molmil
Crystal Structure of HasAp Capturing Chromium Tetraphenylporphyrin
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, ...
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMT
DownloadVisualize
BU of 7emt by Molmil
Crystal Structure of the HasAp V37G Mutant Capturing Iron Tetraphenylporphyrin
分子名称: Heme acquisition protein HasAp, [5,10,15,20-tetraphenylporphyrinato(2-)-kappa~4~N~21~,N~22~,N~23~,N~24~]iron
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMV
DownloadVisualize
BU of 7emv by Molmil
Crystal Structure of the HasAp V37G Mutant Capturing Iron-5,10,15-Triphenylporphyrin
分子名称: 5,10,15-Triphenylporphyrin cpntaining FE, GLYCEROL, Heme acquisition protein HasAp, ...
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMR
DownloadVisualize
BU of 7emr by Molmil
Crystal Structure of HasAp Capturing Cobalt Tetraphenylporphyrin
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Co-5,10,15,20-Tetraphenylporphyrin, ...
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMO
DownloadVisualize
BU of 7emo by Molmil
Crystal Structure of HasAp Capturing Iron Tetraphenylporphyrin
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, ...
著者Shisaka, Y, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMU
DownloadVisualize
BU of 7emu by Molmil
Crystal Structure of the HasAp V37G Mutant Capturing Manganese Tetraphenylporphyrin
分子名称: GLYCEROL, Heme acquisition protein HasAp, Mn-5,10,15,20-Tetraphenylporphyrin
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
6AUG
DownloadVisualize
BU of 6aug by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with SR16832
分子名称: 2-chloro-N-(6-methoxyquinolin-4-yl)-5-nitrobenzamide, Peroxisome proliferator-activated receptor gamma, nonanoic acid
著者Shang, J, Kojetin, D.J.
登録日2017-08-31
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018
7ESR
DownloadVisualize
BU of 7esr by Molmil
Crystal structure of Synechocystis sp PCC6803 guanidinium hydrolase (R32)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Mayans, O.M, Fleming, J.R.
登録日2021-05-11
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Discovery of a Ni 2+ -dependent guanidine hydrolase in bacteria.
Nature, 603, 2022
2I4J
DownloadVisualize
BU of 2i4j by Molmil
Crystal structure of the complex between PPARgamma and the agonist LT160 (ureidofibrate derivative)
分子名称: (2R)-2-(4-{2-[1,3-BENZOXAZOL-2-YL(HEPTYL)AMINO]ETHYL}PHENOXY)-2-METHYLBUTANOIC ACID, Peroxisome proliferator-activated receptor gamma
著者Pochetti, G, Mazza, F.
登録日2006-08-22
公開日2007-04-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Insights into the mechanism of partial agonism: crystal structures of the peroxisome proliferator-activated receptor gamma ligand-binding domain in the complex with two enantiomeric ligands
J.Biol.Chem., 282, 2007
7ZKO
DownloadVisualize
BU of 7zko by Molmil
X-ray structure of the complex between human alpha thrombin and a pseudo-cyclic thrombin binding aptamer (TBA-NNp/DDp) - Crystal form delta
分子名称: 3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate, 3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
著者Troisi, R, Sica, F.
登録日2022-04-13
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A terminal functionalization strategy reveals unusual binding abilities of anti-thrombin anticoagulant aptamers.
Mol Ther Nucleic Acids, 30, 2022
7ZKN
DownloadVisualize
BU of 7zkn by Molmil
X-ray structure of the complex between human alpha thrombin and a pseudo-cyclic thrombin binding aptamer (TBA-NNp/DDp) - Crystal form gamma
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate, 3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate, ...
著者Troisi, R, Sica, F.
登録日2022-04-13
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献A terminal functionalization strategy reveals unusual binding abilities of anti-thrombin anticoagulant aptamers.
Mol Ther Nucleic Acids, 30, 2022
7ZKM
DownloadVisualize
BU of 7zkm by Molmil
X-ray structure of the complex between human alpha thrombin and a pseudo-cyclic thrombin binding aptamer (TBA-NNp/DDp) - Crystal form beta
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate, 3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate, ...
著者Troisi, R, Sica, F.
登録日2022-04-13
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A terminal functionalization strategy reveals unusual binding abilities of anti-thrombin anticoagulant aptamers.
Mol Ther Nucleic Acids, 30, 2022
7ZKL
DownloadVisualize
BU of 7zkl by Molmil
X-ray structure of the complex between human alpha thrombin and a pseudo-cyclic thrombin binding aptamer (TBA-NNp/DDp) - Crystal form alpha
分子名称: (2S)-2-hydroxybutanedioic acid, 3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate, 3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate, ...
著者Troisi, R, Sica, F.
登録日2022-04-13
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献A terminal functionalization strategy reveals unusual binding abilities of anti-thrombin anticoagulant aptamers.
Mol Ther Nucleic Acids, 30, 2022
1DJI
DownloadVisualize
BU of 1dji by Molmil
PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH CALCIUM
分子名称: ACETATE ION, CALCIUM ION, PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C, ...
著者Essen, L.-O, Perisic, O, Williams, R.L.
登録日1996-09-25
公開日1997-07-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A ternary metal binding site in the C2 domain of phosphoinositide-specific phospholipase C-delta1.
Biochemistry, 36, 1997
6AVI
DownloadVisualize
BU of 6avi by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and Nonanoic acid
分子名称: 2-chloro-5-nitro-N-phenylbenzamide, Peroxisome proliferator-activated receptor gamma, nonanoic acid
著者Shang, J, Kojetin, D.J.
登録日2017-09-02
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018
2ISD
DownloadVisualize
BU of 2isd by Molmil
PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT
分子名称: ACETATE ION, PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C, ISOZYME DELTA1
著者Essen, L.-O, Perisic, O, Williams, R.L.
登録日1997-03-31
公開日1997-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a mammalian phosphoinositide-specific phospholipase C delta.
Nature, 380, 1996
4I4F
DownloadVisualize
BU of 4i4f by Molmil
Structure of Focal Adhesion Kinase catalytic domain in complex with an allosteric binding pyrazolobenzothiazine compound.
分子名称: Focal adhesion kinase 1, ISOPROPYL ALCOHOL, N-(4-tert-butylbenzyl)-1,5-dimethyl-1,5-dihydropyrazolo[4,3-c][2,1]benzothiazin-8-amine 4,4-dioxide
著者Skene, R.J, Hosfield, D.J.
登録日2012-11-27
公開日2013-02-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-based discovery of cellular-active allosteric inhibitors of FAK.
Bioorg.Med.Chem.Lett., 23, 2013

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon