Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8VTT
DownloadVisualize
BU of 8vtt by Molmil
Meis1 homeobox domain bound to neomycin fragment
分子名称: Homeobox protein Meis1, RIBOSTAMYCIN, SULFATE ION
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N, Sadek, H.A.
登録日2024-01-27
公開日2024-02-14
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Identification of FDA-approved drugs that induce heart regeneration in mammals.
Nat Cardiovasc Res, 3, 2024
8VTS
DownloadVisualize
BU of 8vts by Molmil
Meis1 homeobox domain bound to paromomycin fragment
分子名称: 1,2-ETHANEDIOL, Homeobox protein Meis1, ISOPROPYL ALCOHOL, ...
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N.
登録日2024-01-27
公開日2024-02-14
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Identification of FDA-approved drugs that induce heart regeneration in mammals.
Nat Cardiovasc Res, 3, 2024
7YUY
DownloadVisualize
BU of 7yuy by Molmil
Structure of a mutated membrane-bound glycosyltransferase
分子名称: (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate, 1,3-beta-glucan synthase component FKS1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hu, X.L, Yang, P, Zhang, M, Liu, X.T, Yu, H.J.
登録日2022-08-18
公開日2023-03-29
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural and mechanistic insights into fungal beta-1,3-glucan synthase FKS1.
Nature, 616, 2023
8K5Q
DownloadVisualize
BU of 8k5q by Molmil
Crystal structure of YajQ STM0435 with c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), YajQ
著者Dai, Y, Zhang, M, Wang, W, Li, B.
登録日2023-07-23
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献A c-di-GMP binding effector STM0435 modulates flagellar motility and pathogenicity in Salmonella
Virulence, 15, 2024
9C4M
DownloadVisualize
BU of 9c4m by Molmil
Crystal Structure of A. baumannii GuaB dCBS with inhibitor G6 (3826)
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, N-[4-chloro-3-(morpholin-4-yl)phenyl]-N~2~-[3-(hydroxymethyl)quinolin-6-yl]-L-alaninamide
著者Harris, S.F, Wu, P.
登録日2024-06-04
公開日2024-09-18
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Differential effects of inosine monophosphate dehydrogenase (IMPDH/GuaB) inhibition in Acinetobacter baumannii and Escherichia coli.
J.Bacteriol., 206, 2024
4WQ6
DownloadVisualize
BU of 4wq6 by Molmil
The crystal structure of human Nicotinamide phosphoribosyltransferase (NAMPT) in complex with N-(4-{(S)-[1-(2-methylpropyl)piperidin-4-yl]sulfinyl}benzyl)furo[2,3-c]pyridine-2-carboxamide inhibitor (compound 21)
分子名称: 1,2-ETHANEDIOL, N-(4-{(S)-[1-(2-methylpropyl)piperidin-4-yl]sulfinyl}benzyl)furo[2,3-c]pyridine-2-carboxamide, Nicotinamide phosphoribosyltransferase, ...
著者Li, D, Wang, W.
登録日2014-10-21
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Identification of nicotinamide phosphoribosyltransferase (NAMPT) inhibitors with no evidence of CYP3A4 time-dependent inhibition and improved aqueous solubility.
Bioorg.Med.Chem.Lett., 25, 2015
7E3O
DownloadVisualize
BU of 7e3o by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody nCoV617
分子名称: Spike protein S1, nCoV617 Heigh Chain, nCoV617 Light Chain
著者Chen, S.D, Yang, M.
登録日2021-02-09
公開日2021-09-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structural Basis of a Human Neutralizing Antibody Specific to the SARS-CoV-2 Spike Protein Receptor-Binding Domain.
Microbiol Spectr, 9, 2021
9IOB
DownloadVisualize
BU of 9iob by Molmil
Cryo-EM structure of the hexameric DRT9-ncRNA complex
分子名称: RNA (177-MER), RNA-dependent DNA polymerase
著者Zhang, J.T, Song, X.Y, Xia, Y.S, Liu, Y.J, Jia, N.
登録日2024-07-08
公開日2025-05-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Bacterial reverse transcriptase synthesizes long poly(A)-rich cDNA for antiphage defense.
Science, 388, 2025
8IM0
DownloadVisualize
BU of 8im0 by Molmil
mCherry-LaM8 complex
分子名称: LaM8, MCherry fluorescent protein
著者Liang, H, Liu, R, Ding, Y.
登録日2023-03-05
公開日2023-06-21
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
8ILX
DownloadVisualize
BU of 8ilx by Molmil
mCherry-LaM3 complex
分子名称: LAM3, MCherry fluorescent protein
著者Liang, H, Liu, R, Ding, Y.
登録日2023-03-05
公開日2023-06-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
8IM1
DownloadVisualize
BU of 8im1 by Molmil
mCherry-LaM1 complex
分子名称: LaM1, MCherry fluorescent protein, SULFATE ION
著者Liang, H, Liu, R, Ding, Y.
登録日2023-03-05
公開日2023-06-21
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
1C40
DownloadVisualize
BU of 1c40 by Molmil
BAR-HEADED GOOSE HEMOGLOBIN (AQUOMET FORM)
分子名称: PROTEIN (HEMOGLOBIN (ALPHA CHAIN)), PROTEIN (HEMOGLOBIN (BETA CHAIN)), PROTOPORPHYRIN IX CONTAINING FE
著者Li, S, Liu, X, Jing, H, Hua, Z, Zhang, R, Lu, G.
登録日1999-08-03
公開日1999-08-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Avian haemoglobins and structural basis of high affinity for oxygen: structure of bar-headed goose aquomet haemoglobin.
Acta Crystallogr.,Sect.D, 57, 2001
3QIP
DownloadVisualize
BU of 3qip by Molmil
Structure of HIV-1 reverse transcriptase in complex with an RNase H inhibitor and nevirapine
分子名称: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, 5,6-dihydroxy-2-[(2-phenyl-1H-indol-3-yl)methyl]pyrimidine-4-carboxylic acid, CHLORIDE ION, ...
著者Lansdon, E.B, Kirschberg, T.A.
登録日2011-01-27
公開日2011-04-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.0926 Å)
主引用文献Structural and Binding Analysis of Pyrimidinol Carboxylic Acid and N-Hydroxy Quinazolinedione HIV-1 RNase H Inhibitors.
Antimicrob.Agents Chemother., 55, 2011
3K6B
DownloadVisualize
BU of 3k6b by Molmil
X-ray crystal structure of the E2 domain of APL-1 from C. elegans, in complex with sucrose octasulfate (SOS)
分子名称: 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, Beta-amyloid-like protein
著者Hoopes, J.T, Ha, Y.
登録日2009-10-08
公開日2009-11-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural characterization of the E2 domain of APL-1, a Caenorhabditis elegans homolog of human amyloid precursor protein, and its heparin binding site
J.Biol.Chem., 285, 2010
3K66
DownloadVisualize
BU of 3k66 by Molmil
X-ray crystal structure of the E2 domain of C. elegans APL-1
分子名称: Beta-amyloid-like protein
著者Hoopes, J.T, Ha, Y.
登録日2009-10-08
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural characterization of the E2 domain of APL-1, a Caenorhabditis elegans homolog of human amyloid precursor protein, and its heparin binding site
J.Biol.Chem., 285, 2010
3RFU
DownloadVisualize
BU of 3rfu by Molmil
Crystal structure of a copper-transporting PIB-type ATPase
分子名称: Copper efflux ATPase, MAGNESIUM ION, POTASSIUM ION, ...
著者Gourdon, P, Liu, X, Skjorringe, T, Morth, J.P, Birk Moller, L, Panyella Pedersen, B, Nissen, P.
登録日2011-04-07
公開日2011-06-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of a copper-transporting PIB-type ATPase.
Nature, 475, 2011
3QIN
DownloadVisualize
BU of 3qin by Molmil
Crystal Structure of HIV-1 RNase H p15 with engineered E. coli loop and pyrimidinol carboxylic acid inhibitor
分子名称: 2-(3-bromo-4-methoxybenzyl)-5,6-dihydroxypyrimidine-4-carboxylic acid, Fusion protein of HIV-1 RNase H p15 with engineered E. coli loop, MANGANESE (II) ION, ...
著者Lansdon, E.B, Kirschberg, T.A.
登録日2011-01-27
公開日2011-04-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6967 Å)
主引用文献Structural and Binding Analysis of Pyrimidinol Carboxylic Acid and N-Hydroxy Quinazolinedione HIV-1 RNase H Inhibitors.
Antimicrob.Agents Chemother., 55, 2011
7F0S
DownloadVisualize
BU of 7f0s by Molmil
A crystal structure of alphavirus nonstructural protein 4 (nsP4) reveals an intrinsically 1dynamic RNA-dependent RNA polymerase
分子名称: RNA-directed RNA polymerase nsP4
著者Tan, Y.B, Luo, D.
登録日2021-06-06
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of alphavirus nonstructural protein 4 (nsP4) reveal an intrinsically dynamic RNA-dependent RNA polymerase fold.
Nucleic Acids Res., 50, 2022
5DUP
DownloadVisualize
BU of 5dup by Molmil
Influenza A virus H5 hemagglutinin globular head in complex with antibody AVFluIgG03
分子名称: AVFluIgG03 Heavy Chain, AVFluIgG03 Light Chain, Hemagglutinin
著者Zuo, T, Sun, J, Wang, G, Zhou, P, Wang, X, Zhang, L.
登録日2015-09-20
公開日2015-12-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.052 Å)
主引用文献Comprehensive analysis of antibody recognition in convalescent humans from highly pathogenic avian influenza H5N1 infection
Nat Commun, 6, 2015
4ES4
DownloadVisualize
BU of 4es4 by Molmil
Crystal structure of YdiV and FlhD complex
分子名称: Flagellar transcriptional regulator FlhD, Putative cyclic di-GMP regulator CdgR
著者Li, B, Gu, L.
登録日2012-04-22
公開日2012-10-10
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insight of a concentration-dependent mechanism by which YdiV inhibits Escherichia coli flagellum biogenesis and motility
Nucleic Acids Res., 40, 2012
5DUT
DownloadVisualize
BU of 5dut by Molmil
Influenza A virus H5 hemagglutinin globular head
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Zuo, T, Sun, J, Wang, G, Zhou, P, Wang, X, Zhang, L.
登録日2015-09-20
公開日2015-12-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Comprehensive analysis of antibody recognition in convalescent humans from highly pathogenic avian influenza H5N1 infection
Nat Commun, 6, 2015
5YIM
DownloadVisualize
BU of 5yim by Molmil
Structure of a Legionella effector
分子名称: SdeA
著者Feng, Y, Dong, Y, Wang, W.
登録日2017-10-05
公開日2018-05-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.394 Å)
主引用文献Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5DUM
DownloadVisualize
BU of 5dum by Molmil
Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody 65C6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 65C6 Heavy Chain, 65C6 Light Chain, ...
著者Sun, J, Zuo, T, Wang, G, Zhou, P, Zhang, L, Wang, X.
登録日2015-09-19
公開日2015-12-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Comprehensive analysis of antibody recognition in convalescent humans from highly pathogenic avian influenza H5N1 infection
Nat Commun, 6, 2015
5DUR
DownloadVisualize
BU of 5dur by Molmil
Influenza A virus H5 hemagglutinin globular head in complex with antibody 100F4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Antibody 100F4, Hemagglutinin, ...
著者Zuo, T, Sun, J, Wang, G, Zhou, P, Wang, X, Zhang, L.
登録日2015-09-20
公開日2015-12-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Comprehensive analysis of antibody recognition in convalescent humans from highly pathogenic avian influenza H5N1 infection
Nat Commun, 6, 2015
7SGO
DownloadVisualize
BU of 7sgo by Molmil
Crystal structure of periplasmic domain of Helicobacter pylori FliL (residues 81 to 183) (crystal form B)
分子名称: Flagellar protein FliL
著者Chan, K.L, Peterson, B, Khan, M.F, Roujeinikova, A.
登録日2021-10-06
公開日2022-03-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.695 Å)
主引用文献The flagellar motor protein FliL forms a scaffold of circumferentially positioned rings required for stator activation.
Proc.Natl.Acad.Sci.USA, 119, 2022

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon