Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2ZDV
DownloadVisualize
BU of 2zdv by Molmil
Exploring Thrombin S1 pocket
分子名称: D-phenylalanyl-N-(3-fluorobenzyl)-L-prolinamide, Hirudin variant-1, PHOSPHATE ION, ...
著者Baum, B, Heine, A, Klebe, G.
登録日2007-11-29
公開日2008-10-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Exploring Thrombin S1 pocket
To be Published
2PDX
DownloadVisualize
BU of 2pdx by Molmil
Human aldose reductase double mutant S302R-C303D complexed with zopolrestat.
分子名称: 3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2-BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Steuber, H, Heine, A, Klebe, G.
登録日2007-04-01
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Merging the binding sites of aldose and aldehyde reductase for detection of inhibitor selectivity-determining features.
J.Mol.Biol., 379, 2008
2ZHE
DownloadVisualize
BU of 2zhe by Molmil
Exploring thrombin S3 pocket
分子名称: Hirudin variant-2, N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide, SODIUM ION, ...
著者Brandt, T, Baum, B, Heine, A, Klebe, G.
登録日2008-02-04
公開日2009-02-10
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Exploring thrombin S3 pocket
To be Published
2PDP
DownloadVisualize
BU of 2pdp by Molmil
Human aldose reductase mutant S302R complexed with IDD 393.
分子名称: (5-CHLORO-2-{[(3-NITROBENZYL)AMINO]CARBONYL}PHENOXY)ACETIC ACID, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Steuber, H, Heine, A, Klebe, G.
登録日2007-04-01
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Merging the binding sites of aldose and aldehyde reductase for detection of inhibitor selectivity-determining features.
J.Mol.Biol., 379, 2008
3D49
DownloadVisualize
BU of 3d49 by Molmil
Thrombin Inhibition
分子名称: BENZAMIDINE, Hirudin variant-1, SODIUM ION, ...
著者Baum, B, Heine, A, Klebe, G.
登録日2008-05-14
公開日2009-04-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Understanding Thrombin Inhibition
To be Published
3ONC
DownloadVisualize
BU of 3onc by Molmil
Bond breakage and relocation of a covalently bound bromine of IDD594 in a complex with hAR T113A mutant after moderate radiation dose
分子名称: Aldose reductase, BROMIDE ION, CITRIC ACID, ...
著者Koch, C, Heine, A, Klebe, G.
登録日2010-08-28
公開日2011-08-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Radiation damage reveals promising interaction position
J.SYNCHROTRON RADIAT., 18, 2011
3P2V
DownloadVisualize
BU of 3p2v by Molmil
Novel Benzothiazepine Inhibitor in Complex with human Aldose Reductase
分子名称: Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, [(2S)-4-oxo-2-phenyl-3,4-dihydro-1,5-benzothiazepin-5(2H)-yl]acetic acid
著者Koch, C, Heine, A, Klebe, G.
登録日2010-10-04
公開日2011-08-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Ligand-induced fit affects binding modes and provokes changes in crystal packing of aldose reductase
Biochim.Biophys.Acta, 1810, 2011
3QIH
DownloadVisualize
BU of 3qih by Molmil
HIV-1 protease (mutant Q7K L33I L63I) in complex with a novel inhibitor
分子名称: (4aS,7aS)-1,4-bis(3-hydroxybenzyl)hexahydro-1H-pyrrolo[3,4-b]pyrazine-2,3-dione, CHLORIDE ION, Protease, ...
著者Lindemann, I, Heine, A, Klebe, G.
登録日2011-01-27
公開日2012-02-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Novel inhibitors for HIV-1 protease
To be Published
3PSU
DownloadVisualize
BU of 3psu by Molmil
HIV-1 protease in complex with an isobutyl decorated oligoamine (symmetric binding mode)
分子名称: CHLORIDE ION, N,N'-(iminodiethane-2,1-diyl)bis[4-amino-N-(2-methylpropyl)benzenesulfonamide], Protease
著者Lindemann, I, Heine, A, Klebe, G.
登録日2010-12-02
公開日2011-12-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Multiple binding modes of a symmetric inhibitor in HIV-1 protease
To be Published
3PSY
DownloadVisualize
BU of 3psy by Molmil
Endothiapepsin in complex with an inhibitor based on the Gewald reaction
分子名称: DIMETHYL SULFOXIDE, Endothiapepsin, GLYCEROL, ...
著者Koester, H, Heine, A, Klebe, G.
登録日2010-12-02
公開日2011-12-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Tracing binding modes in hit-to-lead optimization: chameleon-like poses of aspartic protease inhibitors.
Angew.Chem.Int.Ed.Engl., 54, 2015
3PLD
DownloadVisualize
BU of 3pld by Molmil
Endothiapepsin in complex with a fragment
分子名称: 4-chlorobenzyl carbamimidothioate, Endothiapepsin, GLYCEROL
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-15
公開日2011-11-02
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PGI
DownloadVisualize
BU of 3pgi by Molmil
Endothiapepsin in complex with a fragment
分子名称: Endothiapepsin, GLYCEROL, N-(1,3-benzodioxol-5-yl)-2-(piperidin-1-yl)acetamide
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-02
公開日2011-10-26
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PM4
DownloadVisualize
BU of 3pm4 by Molmil
Endothiapepsin in complex with a fragment
分子名称: 2-(imidazo[1,2-a]pyridin-2-yl)-N-phenylacetamide, Endothiapepsin, GLYCEROL
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-16
公開日2011-11-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PI0
DownloadVisualize
BU of 3pi0 by Molmil
Endothiapepsin in complex with a fragment
分子名称: DIMETHYL SULFOXIDE, Endothiapepsin, GLYCEROL, ...
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-05
公開日2011-11-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3QRO
DownloadVisualize
BU of 3qro by Molmil
HIV-1 protease (mutant Q7K L33I L63I) in complex with a three-armed pyrrolidine-based inhibitor
分子名称: 4-({(3S,4S)-4-[(3,5-dihydroxybenzyl)amino]pyrrolidin-3-yl}[4-(trifluoromethyl)benzyl]sulfamoyl)benzamide, CHLORIDE ION, DITHIANE DIOL, ...
著者Lindemann, I, Heine, A, Klebe, G.
登録日2011-02-18
公開日2012-02-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.616 Å)
主引用文献Design of a series of novel three-armed pyrrolidine-based inhibitors for HIV-1 protease
To be Published
3Q70
DownloadVisualize
BU of 3q70 by Molmil
Secreted aspartic protease in complex with ritonavir
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Candidapepsin-2, RITONAVIR, ...
著者Koester, H, Heine, A, Klebe, G.
登録日2011-01-04
公開日2012-01-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The bindingmode of HIV-1 protease inhibitors to pepsin-like aspartic proteinases
To be Published
3PMU
DownloadVisualize
BU of 3pmu by Molmil
Endothiapepsin in complex with a fragment
分子名称: (2S)-1-[(2-fluorobenzyl)oxy]-3-(pyrrolidin-1-yl)propan-2-ol, Endothiapepsin
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-18
公開日2011-11-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PLL
DownloadVisualize
BU of 3pll by Molmil
Endothiapepsin in complex with a fragment
分子名称: 2-chlorobenzyl carbamimidothioate, Endothiapepsin, GLYCEROL
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-15
公開日2011-11-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PMY
DownloadVisualize
BU of 3pmy by Molmil
Endothiapepsin in complex with a fragment
分子名称: Endothiapepsin, GLYCEROL, N-(1H-benzimidazol-1-yl)-2-phenylacetamide
著者Koester, H, Heine, A, Klebe, G.
登録日2010-11-18
公開日2011-11-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PBZ
DownloadVisualize
BU of 3pbz by Molmil
Endothiapepsin in complex with a fragment
分子名称: 4-(diethylamino)benzohydrazide, DIMETHYL SULFOXIDE, Endothiapepsin, ...
著者Koester, H, Heine, A, Klebe, G.
登録日2010-10-21
公開日2011-10-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3QRS
DownloadVisualize
BU of 3qrs by Molmil
HIV-1 protease (mutant Q7K L33I L63I) in complex with a three-armed pyrrolidine-based inhibitor
分子名称: 4-({(3S,4S)-4-[(4-carbamoylbenzyl)amino]pyrrolidin-3-yl}[4-(trifluoromethyl)benzyl]sulfamoyl)benzamide, CHLORIDE ION, Protease
著者Lindemann, I, Heine, A, Klebe, G.
登録日2011-02-18
公開日2012-02-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Design of a series of novel three-armed pyrrolidine-based inhibitors for HIV-1 protease
To be Published
3QX5
DownloadVisualize
BU of 3qx5 by Molmil
Thrombin Inhibition by Pyridin Derivatives
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(4-chloro-1-methylpyridinium-2-yl)methyl]-L-prolinamide, GLYCEROL, ...
著者Biela, A, Heine, A, Klebe, G.
登録日2011-03-01
公開日2012-03-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Impact of ligand and protein desolvation on ligand binding to the S1 pocket of thrombin
J.Mol.Biol., 418, 2012
3P17
DownloadVisualize
BU of 3p17 by Molmil
Thrombin Inhibition by Pyridin Derivatives
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-(pyridin-3-ylmethyl)-L-prolinamide, Hirudin variant-2, ...
著者Biela, A, Heine, A, Klebe, G.
登録日2010-09-30
公開日2011-11-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Impact of ligand and protein desolvation on ligand binding to the S1 pocket of thrombin.
J.Mol.Biol., 418, 2012
3PB5
DownloadVisualize
BU of 3pb5 by Molmil
Endothiapepsin in complex with a fragment
分子名称: Endothiapepsin, GLYCEROL, N-methyl-1-[5-(pyridin-3-yloxy)furan-2-yl]methanamine
著者Koester, H, Heine, A, Klebe, G.
登録日2010-10-20
公開日2011-10-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PBD
DownloadVisualize
BU of 3pbd by Molmil
Endothiapepsin in complex with a fragment
分子名称: 1H-isoindol-3-amine, Endothiapepsin, GLYCEROL
著者Koester, H, Heine, A, Klebe, G.
登録日2010-10-20
公開日2011-10-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon