Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4OLW
DownloadVisualize
BU of 4olw by Molmil
Crystal structure of antibody VRC07-G54H in complex with clade A/E 93TH057 HIV-1 gp120 core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2014-01-25
公開日2014-09-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.709 Å)
主引用文献Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014
8YDC
DownloadVisualize
BU of 8ydc by Molmil
Crystal structure of a hammerhead ribozyme with pseudoknot
分子名称: DNA/RNA (5'-R(*AP*CP*AP*UP*GP*UP*CP*U)-D(P*C)-R(P*UP*GP*GP*GP*A)-3'), GUANOSINE-5'-TRIPHOSPHATE, ribozyme strand
著者Liu, Y, Zhan, X.
登録日2024-02-20
公開日2024-08-21
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献The structure and catalytic mechanism of a pseudoknot-containing hammerhead ribozyme.
Nat Commun, 15, 2024
4OLU
DownloadVisualize
BU of 4olu by Molmil
Crystal structure of antibody VRC07 in complex with clade A/E 93TH057 HIV-1 gp120 core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2014-01-25
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014
4OLX
DownloadVisualize
BU of 4olx by Molmil
Crystal structure of antibody VRC07-G54L in complex with clade A/E 93TH057 HIV-1 gp120 core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2014-01-25
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014
8U3B
DownloadVisualize
BU of 8u3b by Molmil
Cryo-EM structure of E. coli NarL-transcription activation complex at 3.2A
分子名称: DNA (69-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Kompaniiets, D, Wang, D.
登録日2023-09-07
公開日2024-01-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural basis for transcription activation by the nitrate-responsive regulator NarL.
Nucleic Acids Res., 52, 2024
1UXD
DownloadVisualize
BU of 1uxd by Molmil
Fructose repressor DNA-binding domain, NMR, 34 structures
分子名称: FRUCTOSE REPRESSOR
著者Penin, F, Geourjon, C, Montserret, R, Bockmann, A, Lesage, A, Yang, Y, Bonod-Bidaud, C, Cortay, J.C, Negre, D, Cozzone, A.J, Deleage, G.
登録日1996-12-26
公開日1997-04-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of the DNA-binding domain of the fructose repressor from Escherichia coli by 1H and 15N NMR.
J.Mol.Biol., 270, 1997
4OLV
DownloadVisualize
BU of 4olv by Molmil
Crystal structure of antibody VRC07-G54F in complex with clade A/E 93TH057 HIV-1 gp120 core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2014-01-25
公開日2014-09-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014
4OLY
DownloadVisualize
BU of 4oly by Molmil
Crystal structure of antibody VRC07-G54R in complex with clade A/E 93TH057 HIV-1 gp120 core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2014-01-25
公開日2014-09-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.351 Å)
主引用文献Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo.
J.Virol., 88, 2014
1T2M
DownloadVisualize
BU of 1t2m by Molmil
Solution Structure Of The Pdz Domain Of AF-6
分子名称: AF-6 protein
著者Zhou, H, Wu, J.H, Xu, Y.Q, Huang, A.D, Shi, Y.Y.
登録日2004-04-22
公開日2005-02-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of AF-6 PDZ Domain and Its Interaction with the C-terminal Peptides from Neurexin and Bcr
J.Biol.Chem., 280, 2005
1UXC
DownloadVisualize
BU of 1uxc by Molmil
FRUCTOSE REPRESSOR DNA-BINDING DOMAIN, NMR, MINIMIZED STRUCTURE
分子名称: FRUCTOSE REPRESSOR
著者Penin, F, Geourjon, C, Montserret, R, Bockmann, A, Lesage, A, Yang, Y, Bonod-Bidaud, C, Cortay, J.C, Negre, D, Cozzone, A.J, Deleage, G.
登録日1996-12-26
公開日1997-04-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of the DNA-binding domain of the fructose repressor from Escherichia coli by 1H and 15N NMR.
J.Mol.Biol., 270, 1997
4I3R
DownloadVisualize
BU of 4i3r by Molmil
Crystal structure of the outer domain of HIV-1 gp120 in complex with VRC-PG04 space group P3221
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of VRC-PG04 Fab, Light chain of VRC-PG04 Fab, ...
著者Joyce, M.G, Biertumpfel, C, Nabel, G.J, Kwong, P.D.
登録日2012-11-26
公開日2013-01-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Outer Domain of HIV-1 gp120: Antigenic Optimization, Structural Malleability, and Crystal Structure with Antibody VRC-PG04.
J.Virol., 87, 2013
4I3S
DownloadVisualize
BU of 4i3s by Molmil
Crystal structure of the outer domain of HIV-1 gp120 in complex with VRC-PG04 space group P21
分子名称: CALCIUM ION, Heavy chain of VRC-PG04 Fab, Light chain of VRC-PG04 Fab, ...
著者Joyce, M.G, Biertumpfel, C, Nabel, G.J, Kwong, P.D.
登録日2012-11-26
公開日2013-01-09
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Outer Domain of HIV-1 gp120: Antigenic Optimization, Structural Malleability, and Crystal Structure with Antibody VRC-PG04.
J.Virol., 87, 2013
8Z50
DownloadVisualize
BU of 8z50 by Molmil
Crystal structure of the ASF1-H3T-H4 complex
分子名称: Histone H3.1t, Histone H4, Histone chaperone ASF1A
著者Xu, L.
登録日2024-04-18
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into instability of the nucleosome driven by histone variant H3T.
Biochem.Biophys.Res.Commun., 727, 2024
6O58
DownloadVisualize
BU of 6o58 by Molmil
Human MCU-EMRE complex, dimer of channel
分子名称: CALCIUM ION, Calcium uniporter protein, mitochondrial, ...
著者Wang, Y, Bai, X, Jiang, Y.
登録日2019-03-01
公開日2019-05-22
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural Mechanism of EMRE-Dependent Gating of the Human Mitochondrial Calcium Uniporter.
Cell, 177, 2019
8WH4
DownloadVisualize
BU of 8wh4 by Molmil
MPOX E5 hexamer ssDNA bound apo conformation
分子名称: DNA (5'-D(P*CP*CP*CP*C)-3'), Uncoating factor OPG117
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH3
DownloadVisualize
BU of 8wh3 by Molmil
MPOX E5 hexamer apo form
分子名称: Uncoating factor OPG117
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH6
DownloadVisualize
BU of 8wh6 by Molmil
MPOX E5 hexamer ADP and ssDNA bound and clear primase domain conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*CP*CP*C)-3'), Uncoating factor OPG117, ...
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WGZ
DownloadVisualize
BU of 8wgz by Molmil
MPOX E5 double hexamer ssDNA bound conformation
分子名称: DNA (5'-D(P*CP*CP*CP*CP*C)-3'), Uncoating factor OPG117
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-10-16
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WGY
DownloadVisualize
BU of 8wgy by Molmil
MPOX E5 hexamer AMP-PNP and ssDNA bound form with clear primase domain
分子名称: DNA (5'-D(P*CP*CP*C)-3'), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-10-16
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH0
DownloadVisualize
BU of 8wh0 by Molmil
MPOX E5 hexamer ssDNA and AMP-PNP bound conformation
分子名称: DNA (5'-D(P*CP*CP*CP*CP*C)-3'), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
1NYP
DownloadVisualize
BU of 1nyp by Molmil
4th LIM domain of PINCH protein
分子名称: PINCH protein, ZINC ION
著者Velyvis, A, Vaynberg, J, Vinogradova, O, Zhang, Y, Wu, C, Qin, J.
登録日2003-02-13
公開日2003-07-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural and functional insights into PINCH LIM4 domain-mediated integrin signaling
Nat.Struct.Biol., 10, 2003
4YRB
DownloadVisualize
BU of 4yrb by Molmil
mouse TDH mutant R180K with NAD+ bound
分子名称: L-threonine 3-dehydrogenase, mitochondrial, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者He, C, Li, F.
登録日2015-03-14
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural insights on mouse l-threonine dehydrogenase: A regulatory role of Arg180 in catalysis
J.Struct.Biol., 192, 2015
4YR9
DownloadVisualize
BU of 4yr9 by Molmil
mouse TDH with NAD+ bound
分子名称: GLYCEROL, L-threonine 3-dehydrogenase, mitochondrial, ...
著者He, C, Li, F.
登録日2015-03-14
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights on mouse l-threonine dehydrogenase: A regulatory role of Arg180 in catalysis
J.Struct.Biol., 192, 2015
8H01
DownloadVisualize
BU of 8h01 by Molmil
SARS-CoV-2 Omicron BA.1 Spike glycoprotein in complex with rabbit monoclonal antibody 1H1 Fab in class 2 conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Guo, H, Gao, Y, Lu, Y, Yang, H, Ji, X.
登録日2022-09-27
公開日2023-04-12
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Mechanism of a rabbit monoclonal antibody broadly neutralizing SARS-CoV-2 variants.
Commun Biol, 6, 2023
8GZZ
DownloadVisualize
BU of 8gzz by Molmil
Local refinement of SARS-CoV-2 Omicron BA.1 Spike glycoprotein in complex with rabbit monoclonal antibody 1H1 Fab
分子名称: Spike protein S1, rabbit monoclonal antibody 1H1 Fab heavy chain, rabbit monoclonal antibody 1H1 Fab light chain
著者Guo, H, Gao, Y, Lu, Y, Yang, H, Ji, X.
登録日2022-09-27
公開日2023-04-12
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Mechanism of a rabbit monoclonal antibody broadly neutralizing SARS-CoV-2 variants.
Commun Biol, 6, 2023

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon