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6LQT
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BU of 6lqt by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State E)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
著者Du, Y, Ye, K.
登録日2020-01-14
公開日2020-09-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQQ
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BU of 6lqq by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State B)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
著者Du, Y, Ye, K.
登録日2020-01-14
公開日2020-09-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
4J0W
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BU of 4j0w by Molmil
Structure of U3-55K
分子名称: U3 small nucleolar RNA-interacting protein 2
著者Zhang, L, Lin, J, Ye, K.
登録日2013-01-31
公開日2013-06-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional analysis of the U3 snoRNA binding protein Rrp9.
Rna, 19, 2013
6LQP
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BU of 6lqp by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ...
著者Du, Y, Ye, K.
登録日2020-01-14
公開日2020-09-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LQU
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BU of 6lqu by Molmil
Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S11-A, ...
著者Du, Y, Ye, K.
登録日2020-01-14
公開日2020-09-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states.
Science, 369, 2020
6LZ1
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BU of 6lz1 by Molmil
Structure of S.pombe alpha-mannosidase Ams1
分子名称: Ams1, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-02-17
公開日2020-09-09
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of fission yeast tetrameric alpha-mannosidase Ams1.
Febs Open Bio, 10, 2020
4WNZ
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BU of 4wnz by Molmil
Crystal structure of Pyrococcus furiosus Cmr4 (Cas7)
分子名称: CRISPR system Cmr subunit Cmr4
著者Zhu, X, Ye, K.
登録日2014-10-15
公開日2015-01-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cmr4 is the slicer in the RNA-targeting Cmr CRISPR complex
Nucleic Acids Res., 43, 2015
4M5D
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BU of 4m5d by Molmil
Crystal structure of the Utp22 and Rrp7 complex from Saccharomyces cerevisiae
分子名称: Ribosomal RNA-processing protein 7, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Lin, J, Ye, K.
登録日2013-08-08
公開日2013-11-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献An RNA-Binding Complex Involved in Ribosome Biogenesis Contains a Protein with Homology to tRNA CCA-Adding Enzyme.
Plos Biol., 11, 2013
4J0X
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BU of 4j0x by Molmil
Structure of Rrp9
分子名称: Ribosomal RNA-processing protein 9
著者Zhang, L, Lin, J, Ye, K.
登録日2013-01-31
公開日2013-06-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural and functional analysis of the U3 snoRNA binding protein Rrp9.
Rna, 19, 2013
4MJ7
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BU of 4mj7 by Molmil
Crystal structure of the PIN domain of Saccharomyces cerevisiae Utp23
分子名称: ZINC ION, rRNA-processing protein UTP23
著者Lu, J, Ye, K.
登録日2013-09-03
公開日2013-11-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structural and functional analysis of Utp23, a yeast ribosome synthesis factor with degenerate PIN domain
Rna, 19, 2013
5YDU
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BU of 5ydu by Molmil
Crystal structure of Utp30
分子名称: PHOSPHATE ION, Ribosome biogenesis protein UTP30
著者Hu, J, Zhu, X, Ye, K.
登録日2017-09-14
公開日2017-11-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.646 Å)
主引用文献Structure and RNA recognition of ribosome assembly factor Utp30.
RNA, 23, 2017
5YMA
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BU of 5yma by Molmil
Crystal structure of ribosome assembly factor Efg1
分子名称: Putative rRNA processing protein
著者Shu, S, Ye, K.
登録日2017-10-21
公開日2018-01-17
最終更新日2018-03-21
実験手法X-RAY DIFFRACTION (3.295 Å)
主引用文献Structural and functional analysis of ribosome assembly factor Efg1.
Nucleic Acids Res., 46, 2018
5YZ4
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BU of 5yz4 by Molmil
Structure of the PIN domain endonuclease Utp24
分子名称: CALCIUM ION, ZINC ION, rRNA-processing protein fcf1
著者Du, Y, An, W, Ye, K.
登録日2017-12-12
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.135 Å)
主引用文献Structural and functional analysis of Utp24, an endonuclease for processing 18S ribosomal RNA.
Plos One, 13, 2018
5Z1G
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BU of 5z1g by Molmil
Structure of the Brx1 and Ebp2 complex
分子名称: Ribosome biogenesis protein BRX1, SULFATE ION, rRNA-processing protein EBP2
著者Zheng, S, Ye, K.
登録日2017-12-26
公開日2018-04-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.294 Å)
主引用文献Cryo-EM structure of an early precursor of large ribosomal subunit reveals a half-assembled intermediate
Protein Cell, 10, 2019
5Z3G
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BU of 5z3g by Molmil
Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)
分子名称: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ...
著者Zhu, X, Zhou, D, Ye, K.
登録日2018-01-06
公開日2018-04-11
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Cryo-EM structure of an early precursor of large ribosomal subunit reveals a half-assembled intermediate.
Protein Cell, 10, 2019
4QMF
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BU of 4qmf by Molmil
Structure of the Krr1 and Faf1 complex from Saccharomyces cerevisiae
分子名称: KRR1 small subunit processome component, Protein FAF1
著者Zheng, S, Ye, K.
登録日2014-06-16
公開日2014-07-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Interaction between ribosome assembly factors Krr1 and Faf1 is essential for formation of small ribosomal subunit in yeast
J.Biol.Chem., 289, 2014
4NSX
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BU of 4nsx by Molmil
Crystal Structure of the Utp21 tandem WD Domain
分子名称: CITRATE ANION, U3 small nucleolar RNA-associated protein 21
著者Zhang, C, Ye, K.
登録日2013-11-29
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Utp21 Tandem WD Domain Provides Insight into the Organization of the UTPB Complex Involved in Ribosome Synthesis
Plos One, 9, 2014
5WYL
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BU of 5wyl by Molmil
Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices
分子名称: Putative uncharacterized protein
著者Chen, R, Zhu, X, Ye, K.
登録日2017-01-13
公開日2017-06-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.638 Å)
主引用文献Molecular architecture of the 90S small subunit pre-ribosome
Elife, 6, 2017
5WY4
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BU of 5wy4 by Molmil
Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain
分子名称: Putative uncharacterized protein
著者Chen, R, Zhu, X, Ye, K.
登録日2017-01-10
公開日2018-01-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain
To Be Published
2LUA
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BU of 2lua by Molmil
Solution structure of CXC domain of MSL2
分子名称: Protein male-specific lethal-2, ZINC ION
著者Feng, Y, Ye, K, Zheng, S, Wang, J.
登録日2012-06-09
公開日2012-10-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of MSL2 CXC Domain Reveals an Unusual Zn(3)Cys(9) Cluster and Similarity to Pre-SET Domains of Histone Lysine Methyltransferases.
Plos One, 7, 2012
2MBY
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BU of 2mby by Molmil
NMR Structure of Rrp7 C-terminal Domain
分子名称: Ribosomal RNA-processing protein 7
著者Lin, J, Feng, Y, Ye, K.
登録日2013-08-08
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An RNA-Binding Complex Involved in Ribosome Biogenesis Contains a Protein with Homology to tRNA CCA-Adding Enzyme.
Plos Biol., 11, 2013
4RKG
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BU of 4rkg by Molmil
Structure of the MSL2 CXC domain bound with a non-specific (GC)6 DNA
分子名称: DNA (5'-D(*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*C)-3'), E3 ubiquitin-protein ligase msl-2, ZINC ION
著者Zheng, S, Ye, K.
登録日2014-10-13
公開日2015-01-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during Drosophila dosage compensation.
Genes Dev., 28, 2014
4RKH
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BU of 4rkh by Molmil
Structure of the MSL2 CXC domain bound with a specific MRE sequence
分子名称: DNA (5'-D(*AP*TP*CP*CP*AP*TP*CP*TP*CP*GP*CP*TP*CP*AP*T)-3'), DNA (5'-D(*AP*TP*GP*AP*GP*CP*GP*AP*GP*AP*TP*GP*GP*AP*T)-3'), E3 ubiquitin-protein ligase msl-2, ...
著者Zheng, S, Ye, K.
登録日2014-10-13
公開日2015-01-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during Drosophila dosage compensation.
Genes Dev., 28, 2014
4S3H
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BU of 4s3h by Molmil
Crystal structure of S. pombe Mdb1 FHA domain
分子名称: Mdb1, SULFATE ION
著者Luo, S, Ye, K.
登録日2015-01-26
公開日2015-07-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Dimerization Mediated by a Divergent Forkhead-associated Domain Is Essential for the DNA Damage and Spindle Functions of Fission Yeast Mdb1.
J.Biol.Chem., 290, 2015
1I5T
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BU of 1i5t by Molmil
SOLUTION STRUCTURE OF CYANOFERRICYTOCHROME C
分子名称: CYANIDE ION, CYTOCHROME C, HEME C
著者Yao, Y, Qian, C, Ye, K, Wang, J, Tang, W.
登録日2001-02-28
公開日2001-03-21
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of cyanoferricytochrome c: ligand-controlled conformational flexibility and electronic structure of the heme moiety.
J.Biol.Inorg.Chem., 7, 2002

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