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8XBD
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BU of 8xbd by Molmil
GH18 family chitinase from cold seep metagenome
分子名称: GH18 chitinase-like superfamily protein
著者Yang, J.
登録日2023-12-06
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献GH18 family chitinase from cold seep metagenome
To Be Published
8XHO
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BU of 8xho by Molmil
Deep sea bacterial PET plastic hydrolase MtCut with mutation S178C
分子名称: CALCIUM ION, PET plastic hydrolase
著者Yang, J.
登録日2023-12-18
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Deep sea bacterial PET plastic hydrolase MtCut with mutation S178C
To Be Published
8H5U
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BU of 8h5u by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-021
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Nb-021, ...
著者Yang, J, Lin, S, Lu, G.W.
登録日2022-10-13
公開日2023-10-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Development of a bispecific nanobody conjugate broadly neutralizes diverse SARS-CoV-2 variants and structural basis for its broad neutralization.
Plos Pathog., 19, 2023
8H5T
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BU of 8h5t by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-015
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Nb-015, Spike protein S1
著者Yang, J, Lin, S, Lu, G.W.
登録日2022-10-13
公開日2023-10-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of a bispecific nanobody conjugate broadly neutralizes diverse SARS-CoV-2 variants and structural basis for its broad neutralization.
Plos Pathog., 19, 2023
7SXO
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BU of 7sxo by Molmil
Yeast Lon (PIM1) with endogenous substrate
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Lon protease homolog, ...
著者Yang, J, Song, A.S, Wiseman, R.L, Lander, G.C.
登録日2021-11-24
公開日2022-01-12
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of hexameric yeast Lon protease (PIM1) highlights the importance of conserved structural elements.
J.Biol.Chem., 298, 2022
2LR7
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BU of 2lr7 by Molmil
Cathelicidin-PY
分子名称: Cathelicidin-PY
著者Yang, J.
登録日2012-03-27
公開日2013-03-27
実験手法SOLUTION NMR
主引用文献Structure of Cathelicidin-PY
To be Published
8J0P
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BU of 8j0p by Molmil
Chitin binding SusD-like protein AqSusD from a marine Bacteroidetes
分子名称: Chitin binding SusD-like protein
著者Yang, J.
登録日2023-04-11
公開日2023-11-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights of a SusD-like protein in marine Bacteroidetes bacteria reveal the molecular basis for chitin recognition and acquisition.
Febs J., 291, 2024
6JHJ
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BU of 6jhj by Molmil
Structure of Marine bacterial laminarinase mutant-E135A
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Tanokura, M, Long, L.
登録日2019-02-18
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6JH5
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BU of 6jh5 by Molmil
Structure of Marine bacterial laminarinase
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Ru, L, Tanokura, M, Long, L.
登録日2019-02-17
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6JIA
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BU of 6jia by Molmil
Marine bacterial laminarinase mutant E135A complex with laminaritetraose
分子名称: CALCIUM ION, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose, laminarinase
著者Yang, J, Xu, Y, Miyakawa, T, Tanokura, M, Long, L.
登録日2019-02-20
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
7W1S
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BU of 7w1s by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-007
分子名称: Nanobody Nb-007, Spike protein S1
著者Yang, J, Lin, S, Sun, H.L, Lu, G.W.
登録日2021-11-20
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献A Potent Neutralizing Nanobody Targeting the Spike Receptor-Binding Domain of SARS-CoV-2 and the Structural Basis of Its Intimate Binding.
Front Immunol, 13, 2022
8JDI
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BU of 8jdi by Molmil
Crystal structure of Cas7-AcrIF25 complex
分子名称: AcrIF25, CRISPR-associated protein Csy3
著者Yang, J, Wang, J, Wang, Y.
登録日2023-05-14
公開日2024-05-29
実験手法X-RAY DIFFRACTION (3.372 Å)
主引用文献Crystal structure of Cas7-AcrIF25 complex
To Be Published
8JDH
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BU of 8jdh by Molmil
Crystal structure of anti-CRISPR AcrIF25
分子名称: AcrIF25
著者Yang, J, Wang, J, Wang, Y.
登録日2023-05-14
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of anti-CRISPR AcrIF25
To Be Published
5YOX
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BU of 5yox by Molmil
HD domain-containing protein YGK1(YGL101W)
分子名称: HD domain-containing protein YGL101W, ZINC ION
著者Yang, J, Wang, F, Gao, Z, Zhou, K, Liu, Q.
登録日2017-10-31
公開日2018-11-21
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献HD domain-containing protein YGK1(YGL101W)
To Be Published
7VW2
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BU of 7vw2 by Molmil
Structure of a dimeric periplasmic protein bound with cupric ions
分子名称: COPPER (II) ION, DUF305 domain-containing protein
著者Yang, J, Liu, L.
登録日2021-11-09
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.186 Å)
主引用文献Structural basis of copper binding by a dimeric periplasmic protein forming a six-helical bundle.
J.Inorg.Biochem., 229, 2022
7VW1
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BU of 7vw1 by Molmil
Structure of a dimeric periplasmic protein bound with cuprous ions
分子名称: COPPER (I) ION, DUF305 domain-containing protein
著者Yang, J, Liu, L.
登録日2021-11-09
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.494 Å)
主引用文献Structural basis of copper binding by a dimeric periplasmic protein forming a six-helical bundle.
J.Inorg.Biochem., 229, 2022
7VW0
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BU of 7vw0 by Molmil
Structure of a dimeric periplasmic protein
分子名称: DUF305 domain-containing protein
著者Yang, J, Liu, L.
登録日2021-11-09
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.447 Å)
主引用文献Structural basis of copper binding by a dimeric periplasmic protein forming a six-helical bundle.
J.Inorg.Biochem., 229, 2022
8IOM
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BU of 8iom by Molmil
Crystal structure of the carboxy-terminal channel-forming domain of Colicin Ib
分子名称: Colicin 1B
著者Yang, J, Hu, N.J.
登録日2023-03-12
公開日2023-04-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of colicin Ib Channel domain at 3.0 Angstroms resolution
To Be Published
7VQM
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BU of 7vqm by Molmil
GH2 beta-galacturonate AqGalA in complex with galacturonide
分子名称: CHLORIDE ION, GH2 beta-galacturonate AqGalA, beta-D-galactopyranuronic acid
著者Yang, J.
登録日2021-10-20
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Biochemical Basis of a Marine Bacterial Glycoside Hydrolase Family 2 beta-Glycosidase with Broad Substrate Specificity
Appl.Environ.Microbiol., 88, 2022
7CCB
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BU of 7ccb by Molmil
Crystal structure of the SPRY domain-containing protein 7 (SPRY7)
分子名称: SPRY domain-containing protein 7
著者Yang, J, Kuang, Z.
登録日2020-06-16
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal structure of the SPRY domain-containing protein 7 reveals unique structural features.
Biochem.Biophys.Res.Commun., 531, 2020
7ECC
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BU of 7ecc by Molmil
M4 family peptidase PlM4P-mature form
分子名称: CALCIUM ION, M4 family peptidase, PHOSPHATE ION, ...
著者Yang, J.
登録日2021-03-12
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献M4 family peptidase PlM4P-mature form
To Be Published
7D6M
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BU of 7d6m by Molmil
Crystal structure of tick-borne encephalitis virus methyltransferase
分子名称: S-ADENOSYLMETHIONINE, Tick-borne encephalitis virus methyltransferase
著者Yang, J, Jing, X, Gong, P.
登録日2020-10-01
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.894 Å)
主引用文献Crystal structure of tick-borne encephalitis virus
Nucleic Acids Res., 2020
7D6N
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BU of 7d6n by Molmil
Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase
分子名称: MAGNESIUM ION, Tick-borne encephalitis virus RNA-dependent RNA polymerase, ZINC ION
著者Yang, J, Jing, X, Gong, P.
登録日2020-10-01
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.168 Å)
主引用文献Crystal structure of tick-borne encephalitis virus
Nucleic Acids Res., 2020
7F0Y
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BU of 7f0y by Molmil
Crystal structure of isomerase NsrQ F58A in complex with substrate analogue
分子名称: NsrQ, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3-oxidanyl-benzoate
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F13
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BU of 7f13 by Molmil
Crystal structure of isomerase Dcr3
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Dcr3
著者Yang, J, Mori, T, Abe, I.
登録日2021-06-07
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021

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