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5GUA
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BU of 5gua by Molmil
Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) A138Y mutant
分子名称: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain
著者Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
登録日2016-08-26
公開日2017-08-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
5GU9
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Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) A138I mutant
分子名称: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain
著者Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
登録日2016-08-26
公開日2017-08-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
5GU8
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BU of 5gu8 by Molmil
Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) wild type
分子名称: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain, SODIUM ION
著者Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
登録日2016-08-26
公開日2017-08-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
7VPY
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BU of 7vpy by Molmil
Crystal structure of the neutralizing nanobody P86 against SARS-CoV-2
分子名称: 1,2-ETHANEDIOL, Nanobody, SULFATE ION
著者Maeda, R, Fujita, J, Konishi, Y, Kazuma, Y, Yamazaki, H, Anzai, I, Yamaguchi, K, Kasai, K, Nagata, K, Yamaoka, Y, Miyakawa, K, Ryo, A, Shirakawa, K, Makino, F, Matsuura, Y, Inoue, T, Imura, A, Namba, K, Takaori-Kondo, A.
登録日2021-10-18
公開日2022-07-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A panel of nanobodies recognizing conserved hidden clefts of all SARS-CoV-2 spike variants including Omicron.
Commun Biol, 5, 2022
2CDV
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BU of 2cdv by Molmil
REFINED STRUCTURE OF CYTOCHROME C3 AT 1.8 ANGSTROMS RESOLUTION
分子名称: CYTOCHROME C3, HEME C
著者Higuchi, Y, Kusunoki, M, Matsuura, Y, Yasuoka, N, Kakudo, M.
登録日1983-11-15
公開日1984-02-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Refined structure of cytochrome c3 at 1.8 A resolution
J.Mol.Biol., 172, 1984
7VQ0
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BU of 7vq0 by Molmil
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Maeda, R, Fujita, J, Konishi, Y, Kazuma, Y, Yamazaki, H, Anzai, I, Yamaguchi, K, Kasai, K, Nagata, K, Yamaoka, Y, Miyakawa, K, Ryo, A, Shirakawa, K, Makino, F, Matsuura, Y, Inoue, T, Imura, A, Namba, K, Takaori-Kondo, A.
登録日2021-10-18
公開日2022-07-20
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献A panel of nanobodies recognizing conserved hidden clefts of all SARS-CoV-2 spike variants including Omicron.
Commun Biol, 5, 2022
1IV8
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BU of 1iv8 by Molmil
Crystal Structure of Maltooligosyl trehalose synthase
分子名称: MALTOOLIGOSYL TREHALOSE SYNTHASE
著者Kobayashi, M, Kubota, M, Matsuura, Y.
登録日2002-03-15
公開日2003-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Refined Structure and Functional Implications of Trehalose Synthase from Sulfolobus acidocaldarius
J.APPL.Glyosci., 50, 2003
5H2X
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BU of 5h2x by Molmil
Crystal structure of the karyopherin Kap60p bound to the SUMO protease Ulp1p (150-172)
分子名称: Importin subunit alpha, Ubiquitin-like-specific protease 1
著者Hirano, H, Matsuura, Y.
登録日2016-10-18
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of the Karyopherins Kap121p and Kap60p Bound to the Nuclear Pore-Targeting Domain of the SUMO Protease Ulp1p
J. Mol. Biol., 429, 2017
5H2W
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BU of 5h2w by Molmil
Crystal structure of the karyopherin Kap60p bound to the SUMO protease Ulp1p (150-340)
分子名称: Importin subunit alpha, Ubiquitin-like-specific protease 1
著者Hirano, H, Matsuura, Y.
登録日2016-10-18
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of the Karyopherins Kap121p and Kap60p Bound to the Nuclear Pore-Targeting Domain of the SUMO Protease Ulp1p
J. Mol. Biol., 429, 2017
5H2V
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BU of 5h2v by Molmil
Crystal structure of the karyopherin Kap121p bound to the SUMO protease Ulp1p
分子名称: Importin subunit beta-3, Ubiquitin-like-specific protease 1
著者Kobayashi, J, Matsuura, Y.
登録日2016-10-18
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of the Karyopherins Kap121p and Kap60p Bound to the Nuclear Pore-Targeting Domain of the SUMO Protease Ulp1p
J. Mol. Biol., 429, 2017
2BFH
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BU of 2bfh by Molmil
CRYSTAL STRUCTURE OF BASIC FIBROBLAST GROWTH FACTOR AT 1.6 ANGSTROMS RESOLUTION
分子名称: BASIC FIBROBLAST GROWTH FACTOR
著者Kitagawa, Y, Ago, H, Katsube, Y, Fujishima, A, Matsuura, Y.
登録日1993-08-31
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of basic fibroblast growth factor at 1.6 A resolution.
J.Biochem.(Tokyo), 110, 1991
2EL2
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BU of 2el2 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L185M)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
著者Asada, Y, Tanaka, Y, Pampa, K, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-26
公開日2007-10-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L185M)
To be Published
2AMG
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BU of 2amg by Molmil
STRUCTURE OF HYDROLASE (GLYCOSIDASE)
分子名称: 1,4-ALPHA-D-GLUCAN MALTOTETRAHYDROLASE, CALCIUM ION
著者Morishita, Y, Hasegawa, K, Matsuura, Y, Kubota, M, Sakai, S, Katsube, Y.
登録日1996-12-23
公開日1997-04-01
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a maltotetraose-forming exo-amylase from Pseudomonas stutzeri.
J.Mol.Biol., 267, 1997
2EK2
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BU of 2ek2 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (E140M)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
著者Asada, Y, Matsuura, Y, Tanaka, Y, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-22
公開日2007-09-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (E140M)
To be Published
2ZTN
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BU of 2ztn by Molmil
Hepatitis E virus ORF2 (Genotype 3)
分子名称: Capsid protein
著者Yamashita, T, Unno, H, Mori, Y, Li, T.C, Takeda, N, Matsuura, Y.
登録日2008-10-08
公開日2009-08-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.56 Å)
主引用文献Biological and immunological characteristics of hepatitis E virus-like particles based on the crystal structure
Proc.Natl.Acad.Sci.USA, 106, 2009
2EK7
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BU of 2ek7 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L163M)
分子名称: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
著者Asada, Y, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-22
公開日2007-09-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L163M)
To be Published
2EKB
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BU of 2ekb by Molmil
Structural study of Project ID TTHB049 from Thermus thermophilus HB8 (L19M)
分子名称: Alpha-ribazole-5'-phosphate phosphatase, SODIUM ION
著者Asada, Y, Taketa, M, Tanaka, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-22
公開日2007-09-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural study of Project ID TTHB049 from Thermus thermophilus HB8 (L19M)
To be Published
2EKA
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BU of 2eka by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L202M)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
著者Asada, Y, Matsuura, Y, Kageyama, Y, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-22
公開日2007-09-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L202M)
To be Published
5XZX
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BU of 5xzx by Molmil
Crystal structure of importin-alpha3 bound to the nuclear localization signal of Ran-binding protein 3
分子名称: Importin subunit alpha-3, Ran-binding protein 3
著者Koyama, M, Matsuura, Y.
登録日2017-07-14
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of importin-alpha 3 bound to the nuclear localization signal of Ran-binding protein 3
Biochem. Biophys. Res. Commun., 491, 2017
5ZGO
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BU of 5zgo by Molmil
Crystal structure of APRT2 from Thermus thermophilus HB8
分子名称: Adenine phosphoribosyltransferase
著者Kunishima, N, Naitow, H, Matsuura, Y.
登録日2018-03-09
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional characterization of thermostable biocatalysts for the synthesis of 6-aminopurine nucleoside-5'-monophospate analogues.
Bioresour. Technol., 276, 2019
5XW5
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BU of 5xw5 by Molmil
Crystal structure of budding yeast Cdc14p (C283S) bound to a Swi6p phosphopeptide
分子名称: Regulatory protein SWI6, SULFATE ION, Tyrosine-protein phosphatase CDC14
著者Kobayashi, J, Matsuura, Y.
登録日2017-06-29
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and dimerization of the catalytic domain of the protein phosphatase Cdc14p, a key regulator of mitotic exit in Saccharomyces cerevisiae
Protein Sci., 26, 2017
5X8N
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BU of 5x8n by Molmil
Crystal structure of mouse importin-alpha1 bound to the nuclear localization signal of Epstein-Barr virus EBNA-LP protein
分子名称: Epstein-Barr nuclear antigen leader protein, Importin subunit alpha-1
著者Nakada, R, Matsuura, Y.
登録日2017-03-03
公開日2017-04-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of importin-alpha bound to the nuclear localization signal of Epstein-Barr virus EBNA-LP protein
Protein Sci., 26, 2017
5XOJ
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BU of 5xoj by Molmil
Crystal structure of Xpo1p-PKI-Nup42p-Gsp1p-GTP complex
分子名称: Exportin-1, GTP-binding nuclear protein, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Koyama, M, Shirai, N, Matsuura, Y.
登録日2017-05-29
公開日2017-08-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the Xpo1p nuclear export complex bound to the SxFG/PxFG repeats of the nucleoporin Nup42p
Genes Cells, 22, 2017
5XW4
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Crystal structure of budding yeast Cdc14p (wild type) in the apo state
分子名称: Tyrosine-protein phosphatase CDC14
著者Kobayashi, J, Matsuura, Y.
登録日2017-06-29
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and dimerization of the catalytic domain of the protein phosphatase Cdc14p, a key regulator of mitotic exit in Saccharomyces cerevisiae
Protein Sci., 26, 2017
5XGS
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BU of 5xgs by Molmil
Crystal structure of human WBSCR16
分子名称: RCC1-like G exchanging factor-like protein
著者Koyama, M, Sasaki, N, Matsuura, Y.
登録日2017-04-16
公開日2017-06-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human WBSCR16, an RCC1-like protein in mitochondria
Protein Sci., 26, 2017

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