Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3VMS
DownloadVisualize
BU of 3vms by Molmil
Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with NBD-Lipid II
分子名称: Monofunctional glycosyltransferase
著者Huang, C.Y, Shih, H.W, Lin, L.Y, Tien, Y.W, Cheng, T.J.R, Cheng, W.C, Wong, C.H, Ma, C.
登録日2011-12-15
公開日2012-04-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.202 Å)
主引用文献Crystal structure of Staphylococcus aureus transglycosylase in complex with a lipid II analog and elucidation of peptidoglycan synthesis mechanism
Proc.Natl.Acad.Sci.USA, 109, 2012
6K61
DownloadVisualize
BU of 6k61 by Molmil
Cryo-EM structure of the tetrameric photosystem I from a heterocyst-forming cyanobacterium Anabaena sp. PCC7120
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Zheng, L, Li, Y, Li, X, Zhong, Q, Li, N, Zhang, K, Zhang, Y, Chu, H, Ma, C, Li, G, Zhao, J, Gao, N.
登録日2019-05-31
公開日2019-10-09
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献Structural and functional insights into the tetrameric photosystem I from heterocyst-forming cyanobacteria.
Nat.Plants, 5, 2019
3VMQ
DownloadVisualize
BU of 3vmq by Molmil
Crystal structure of Staphylococcus aureus membrane-bound transglycosylase: Apoenzyme
分子名称: MAGNESIUM ION, Monofunctional glycosyltransferase
著者Huang, C.Y, Shih, H.W, Lin, L.Y, Tien, Y.W, Cheng, T.J.R, Cheng, W.C, Wong, C.H, Ma, C.
登録日2011-12-15
公開日2012-04-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.518 Å)
主引用文献Crystal structure of Staphylococcus aureus transglycosylase in complex with a lipid II analog and elucidation of peptidoglycan synthesis mechanism
Proc.Natl.Acad.Sci.USA, 109, 2012
3VMT
DownloadVisualize
BU of 3vmt by Molmil
Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with a Lipid II analog
分子名称: MAGNESIUM ION, Monofunctional glycosyltransferase, [(2R,3R,4R,5S,6R)-4-[(2R)-1-[[(2S)-1-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethylamino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]oxy-3-acetamido-5-[(2S,3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-(hydroxymethyl)oxan-2-yl] [oxidanyl(3,7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,14,18,22,26,30,34,38,42-undecaenoxy)phosphoryl] hydrogen phosphate
著者Huang, C.Y, Shih, H.W, Lin, L.Y, Tien, Y.W, Cheng, T.J.R, Cheng, W.C, Wong, C.H, Ma, C.
登録日2011-12-15
公開日2012-04-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献Crystal structure of Staphylococcus aureus transglycosylase in complex with a lipid II analog and elucidation of peptidoglycan synthesis mechanism
Proc.Natl.Acad.Sci.USA, 109, 2012
5GSQ
DownloadVisualize
BU of 5gsq by Molmil
Crystal structure of IgG Fc with a homogeneous glycoform and Antibody-Dependent Cellular Cytotoxicity
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, C.-L, Hsu, J.-C, Lin, C.-W, Wu, C.-Y, Wong, C.-H, Ma, C.
登録日2016-08-17
公開日2017-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of a Homogeneous IgG-Fc Glycoform with the N-Glycan Designed to Maximize the Antibody Dependent Cellular Cytotoxicity
ACS Chem. Biol., 12, 2017
3J8G
DownloadVisualize
BU of 3j8g by Molmil
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
分子名称: 23S rRNA, 50S ribosomal protein L1, 50S ribosomal protein L11, ...
著者Zhang, X, Yan, K, Zhang, Y, Li, N, Ma, C, Li, Z, Zhang, Y, Feng, B, Liu, J, Sun, Y, Xu, Y, Lei, J, Gao, N.
登録日2014-10-24
公開日2014-11-26
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural insights into the function of a unique tandem GTPase EngA in bacterial ribosome assembly
Nucleic Acids Res., 2014
7WG3
DownloadVisualize
BU of 7wg3 by Molmil
Structural basis of interleukin-17B receptor in complex with a neutralizing antibody D9 for guiding humanization and affinity maturation for cancer therapy
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of D9 Fab, IL17RB protein, ...
著者Lee, W.H, Chen, X.R, Liu, I.J, Lee, J.H, Hu, C.M, Wu, H.C, Wang, S.K, Lee, W.H, Ma, C.
登録日2021-12-28
公開日2022-11-09
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural basis of interleukin-17B receptor in complex with a neutralizing antibody for guiding humanization and affinity maturation.
Cell Rep, 41, 2022
7VS3
DownloadVisualize
BU of 7vs3 by Molmil
The crystal structure of rat calcium-dependent activator protein for secretion (CAPS) C2PH
分子名称: Calcium-dependent secretion activator 1, SULFATE ION
著者Zhou, H, Wei, Z.Q, Zhang, L, Ren, Y.J, Ma, C.
登録日2021-10-25
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献The C 2 and PH domains of CAPS constitute an effective PI(4,5)P2-binding unit essential for Ca 2+ -regulated exocytosis.
Structure, 31, 2023
8ZWR
DownloadVisualize
BU of 8zwr by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-1,3-galactosyltransferase 5, ...
著者Lo, J.M, Ma, C.
登録日2024-06-13
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8ZWY
DownloadVisualize
BU of 8zwy by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-methyl beta-D-galactopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lo, J.M, Ma, C.
登録日2024-06-13
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8ZX2
DownloadVisualize
BU of 8zx2 by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lo, J.M, Ma, C.
登録日2024-06-13
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8ZX3
DownloadVisualize
BU of 8zx3 by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lo, J.M, Ma, C.
登録日2024-06-13
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8ZX9
DownloadVisualize
BU of 8zx9 by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-1,3-galactosyltransferase 5, ...
著者Lo, J.M, Ma, C.
登録日2024-06-14
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8ZWP
DownloadVisualize
BU of 8zwp by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lo, J.M, Ma, C.
登録日2024-06-13
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8ZX8
DownloadVisualize
BU of 8zx8 by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
著者Lo, J.M, Ma, C.
登録日2024-06-14
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8ZWW
DownloadVisualize
BU of 8zww by Molmil
Structure-Based Mechanism and Specificity of Human Galactosyltransferase B3GalT5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lo, J.M, Ma, C.
登録日2024-06-13
公開日2025-04-09
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structure-Based Mechanism and Specificity of Human Galactosyltransferase beta 3GalT5.
J.Am.Chem.Soc., 147, 2025
8Y3N
DownloadVisualize
BU of 8y3n by Molmil
The self-assembled nanotube of CPC46A/Q70C
分子名称: Capsid protein
著者Yang, M, Rao, G, Li, L, Qi, L, Ma, C, Zhang, H, Gong, J, Wei, B, Zhang, X.E, Chen, G, Cao, S, Li, F.
登録日2024-01-29
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Transformation of a Viral Capsid from Nanocages to Nanotubes and Then to Hydrogels: Redirected Self-Assembly and Effects on Immunogenicity.
Acs Nano, 18, 2024
8Y3T
DownloadVisualize
BU of 8y3t by Molmil
The self-assembled nanotube of CPC46A/Q70H
分子名称: Capsid protein
著者Yang, M, Rao, G, Li, L, Qi, L, Ma, C, Zhang, H, Gong, J, Wei, B, Zhang, X.E, Chen, G, Cao, S, Li, F.
登録日2024-01-29
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Transformation of a Viral Capsid from Nanocages to Nanotubes and Then to Hydrogels: Redirected Self-Assembly and Effects on Immunogenicity.
Acs Nano, 18, 2024
8Y3V
DownloadVisualize
BU of 8y3v by Molmil
The self-assembled nanotube of CPC46A/Q70V
分子名称: Capsid protein
著者Yang, M, Rao, G, Li, L, Qi, L, Ma, C, Zhang, H, Gong, J, Wei, B, Zhang, X.E, Chen, G, Cao, S, Li, F.
登録日2024-01-29
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Transformation of a Viral Capsid from Nanocages to Nanotubes and Then to Hydrogels: Redirected Self-Assembly and Effects on Immunogenicity.
Acs Nano, 18, 2024
7VQ1
DownloadVisualize
BU of 7vq1 by Molmil
Structure of Apo-hsTRPM2 channel
分子名称: Transient receptor potential cation channel subfamily M member 2
著者Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
登録日2021-10-18
公開日2021-12-22
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021
7VQ2
DownloadVisualize
BU of 7vq2 by Molmil
Structure of Apo-hsTRPM2 channel TM domain
分子名称: Transient receptor potential cation channel subfamily M member 2
著者Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
登録日2021-10-18
公開日2021-12-22
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021
7PEG
DownloadVisualize
BU of 7peg by Molmil
Structure of the sporulation/germination protein YhcN from Bacillus subtilis
分子名称: Probable spore germination lipoprotein YhcN
著者Liu, B, Chan, H, Bauda, E, Contreras-Martel, C, Bellard, L, Villard, A.M, Mas, C, Neumann, E, Fenel, D, Favier, A, Serrano, M, Henriques, A.O.H, Rodrigues, C.D.A, Morlot, C.
登録日2021-08-10
公開日2022-08-24
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural insights into ring-building motif domains involved in bacterial sporulation.
J.Struct.Biol., 214, 2022
6GZ8
DownloadVisualize
BU of 6gz8 by Molmil
First GerMN domain of the sporulation protein GerM from Bacillus subtilis
分子名称: 1,2-ETHANEDIOL, SODIUM ION, Spore germination protein GerM
著者Trouve, J, Mohamed, A, Leisico, F, Contreras-Martel, C, Liu, B, Mas, C, Rudner, D.Z, Rodrigues, C.D.A, Morlot, C.
登録日2018-07-03
公開日2018-10-10
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural characterization of the sporulation protein GerM from Bacillus subtilis.
J. Struct. Biol., 204, 2018
6GZB
DownloadVisualize
BU of 6gzb by Molmil
Tandem GerMN domains of the sporulation protein GerM from Bacillus subtilis
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Spore germination protein GerM
著者Trouve, J, Mohamed, A, Leisico, F, Contreras-Martel, C, Liu, B, Mas, C, Rudner, D.Z, Rodrigues, C.D.A, Morlot, C.
登録日2018-07-03
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural characterization of the sporulation protein GerM from Bacillus subtilis.
J. Struct. Biol., 204, 2018
2K2U
DownloadVisualize
BU of 2k2u by Molmil
NMR Structure of the complex between Tfb1 subunit of TFIIH and the activation domain of VP16
分子名称: Alpha trans-inducing protein, RNA polymerase II transcription factor B subunit 1
著者Langlois, C, Mas, C, Di Lello, P, Miller Jenkins, P.M, Legault, J, Omichinski, J.G.
登録日2008-04-11
公開日2008-08-12
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of the Complex between the Tfb1 Subunit of TFIIH and the Activation Domain of VP16: Structural Similarities between VP16 and p53.
J.Am.Chem.Soc., 130, 2008

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon