Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8Q40
DownloadVisualize
BU of 8q40 by Molmil
Crystal structure of cA4 activated Can2 in complex with a cleaved DNA substrate
分子名称: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*TP*CP*A)-3'), DUF1887 family protein, ...
著者Jungfer, K, Sigg, A, Jinek, M.
登録日2023-08-04
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
8Q41
DownloadVisualize
BU of 8q41 by Molmil
Crystal structure of Can2 (E341A) bound to cA4 and TTTAAA ssDNA
分子名称: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*TP*TP*AP*AP*A)-3'), DUF1887 family protein, ...
著者Jungfer, K, Sigg, A, Jinek, M.
登録日2023-08-04
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
8Q42
DownloadVisualize
BU of 8q42 by Molmil
Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-A DNA
分子名称: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*AP*AP*AP*A)-3'), DUF1887 family protein, ...
著者Jungfer, K, Sigg, A, Jinek, M.
登録日2023-08-04
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
8Q43
DownloadVisualize
BU of 8q43 by Molmil
Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-C DNA
分子名称: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*CP*CP*CP*CP*C)-3'), DUF1887 family protein, ...
著者Jungfer, K, Sigg, A, Jinek, M.
登録日2023-08-04
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
8Q44
DownloadVisualize
BU of 8q44 by Molmil
Crystal structure of cA4-bound Can2 (E364R) in complex with oligo-T DNA
分子名称: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*TP*TP*T)-3'), DUF1887 family protein, ...
著者Jungfer, K, Sigg, A, Jinek, M.
登録日2023-08-04
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
8Q3Z
DownloadVisualize
BU of 8q3z by Molmil
Crystal structure of cA4-bound Can2 from Thermoanaerobacter brockii
分子名称: Cyclic tetraadenosine monophosphate (cA4), DUF1887 family protein, MANGANESE (II) ION
著者Jungfer, K, Sigg, A, Jinek, M.
登録日2023-08-04
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
8Q3Y
DownloadVisualize
BU of 8q3y by Molmil
Crystal structure of apo Can2 from Thermoanaerobacter brockii
分子名称: DUF1887 family protein
著者Jungfer, K, Sigg, A, Jinek, M.
登録日2023-08-04
公開日2023-11-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
7Z4E
DownloadVisualize
BU of 7z4e by Molmil
SpCas9 bound to 8-nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 8 nucleotide complementary DNA substrate, Target strand of 8 nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4I
DownloadVisualize
BU of 7z4i by Molmil
SpCas9 bound to 16-nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 16-nucleotide complementary DNA substrate, POTASSIUM ION, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4C
DownloadVisualize
BU of 7z4c by Molmil
SpCas9 bound to 6 nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 6 nucleotide complementary DNA substrate, Target strand of 6 nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4H
DownloadVisualize
BU of 7z4h by Molmil
SpCas9 bound to 14-nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 14-nucleotide complementary DNA substrate, Target strand of 14-nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4G
DownloadVisualize
BU of 7z4g by Molmil
SpCas9 bound to 12-nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 12-nucleotide complementary DNA substrate, Target strand of 12-nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4K
DownloadVisualize
BU of 7z4k by Molmil
SpCas9 bound to 10-nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 10-nucleotide complementary DNA substrate, Target strand of 10-nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-04
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4J
DownloadVisualize
BU of 7z4j by Molmil
SpCas9 bound to 18-nucleotide complementary DNA substrate in the catalytic state
分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, Non-target strand of 18-nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4L
DownloadVisualize
BU of 7z4l by Molmil
SpCas9 bound to 18-nucleotide complementary DNA substrate in the checkpoint state
分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, Non-target strand of 18-nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-04
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4D
DownloadVisualize
BU of 7z4d by Molmil
Crystal structure of SpCas9 bound to a 10 nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 10 nucleotide complementary DNA substrate, POTASSIUM ION, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7ZYH
DownloadVisualize
BU of 7zyh by Molmil
Crystal structure of human CPSF30 in complex with hFip1
分子名称: Cleavage and polyadenylation specificity factor subunit 4, Isoform 4 of Pre-mRNA 3'-end-processing factor FIP1, ZINC ION
著者Muckenfuss, L.M, Jinek, M, Migenda Herranz, A.C, Clerici, M.
登録日2022-05-24
公開日2022-09-14
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Fip1 is a multivalent interaction scaffold for processing factors in human mRNA 3' end biogenesis.
Elife, 11, 2022
7ZO1
DownloadVisualize
BU of 7zo1 by Molmil
SpCas9 bound to CD34 off-target9 DNA substrate
分子名称: CD34 off-target9 DNA non-target strand, CD34 off-target9 DNA target strand, CD34 sgRNA, ...
著者Pacesa, M, Jinek, M.
登録日2022-04-23
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for Cas9 off-target activity.
Cell, 185, 2022
5FW2
DownloadVisualize
BU of 5fw2 by Molmil
Crystal structure of SpCas9 variant EQR bound to sgRNA and TGAG PAM target DNA
分子名称: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
著者Anders, C, Bargsten, K, Jinek, M.
登録日2016-02-11
公開日2016-06-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.676 Å)
主引用文献Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell, 61, 2016
5FW3
DownloadVisualize
BU of 5fw3 by Molmil
Crystal structure of SpCas9 variant VRER bound to sgRNA and TGCG PAM target DNA
分子名称: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
著者Anders, C, Bargsten, K, Jinek, M.
登録日2016-02-11
公開日2016-06-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell, 61, 2016
5FSH
DownloadVisualize
BU of 5fsh by Molmil
Crystal structure of Thermus thermophilus Csm6
分子名称: CSM6, NICKEL (II) ION
著者Niewoehner, O, Jinek, M.
登録日2016-01-06
公開日2016-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural Basis for the Endoribonuclease Activity of the Type III-A Crispr-Associated Protein Csm6.
RNA, 22, 2016
7ZY4
DownloadVisualize
BU of 7zy4 by Molmil
Crystal structure of human CstF77 in complex with hFip1
分子名称: Cleavage stimulation factor subunit 3, GLYCEROL, hFip1
著者Muckenfuss, L.M, Jinek, M.
登録日2022-05-23
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Fip1 is a multivalent interaction scaffold for processing factors in human mRNA 3' end biogenesis.
Elife, 11, 2022
5FW1
DownloadVisualize
BU of 5fw1 by Molmil
Crystal structure of SpyCas9 variant VQR bound to sgRNA and TGAG PAM target DNA
分子名称: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
著者Anders, C, Bargsten, K, Jinek, M.
登録日2016-02-11
公開日2016-04-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell, 61, 2016
6F9W
DownloadVisualize
BU of 6f9w by Molmil
Crystal structure of the LSM domain of LSM14 in complex with a C-terminal peptide of 4E-T
分子名称: Eukaryotic translation initiation factor 4E transporter, Protein LSM14 homolog A
著者Brandmann, T, Jinek, M.
登録日2017-12-15
公開日2018-03-21
最終更新日2018-04-11
実験手法X-RAY DIFFRACTION (2.623 Å)
主引用文献Molecular architecture of LSM14 interactions involved in the assembly of mRNA silencing complexes.
EMBO J., 37, 2018
7QQR
DownloadVisualize
BU of 7qqr by Molmil
SpCas9 bound to AAVS1 off-target5 DNA substrate
分子名称: 1,2-ETHANEDIOL, AAVS1 off-target5 non-target strand, AAVS1 off-target5 target strand, ...
著者Pacesa, M, Jinek, M.
登録日2022-01-10
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for Cas9 off-target activity.
Cell, 185, 2022

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon