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4AAG
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BU of 4aag by Molmil
Crystal structure of the mutant D75N I-CreI in complex with its wild- type target in presence of Ca at the active site (The four central bases, 2NN region, are composed by GTAC from 5' to 3')
分子名称: 5'-D(*TP*CP*AP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*CP *GP*AP*CP*GP*TP*TP*TP*TP*GP*A)-3', CALCIUM ION, DNA ENDONUCLEASE I-CREI
著者Molina, R, Redondo, P, Stella, S, Marenchino, M, D'Abramo, M, Gervasio, F, Epinat, J.C, Valton, J, Grizot, S, Duchateau, P, Prieto, J, Montoya, G.
登録日2011-12-01
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Non-Specific Protein-DNA Interactions Control I-Crei Target Binding and Cleavage.
Nucleic Acids Res., 40, 2012
4AAD
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BU of 4aad by Molmil
Crystal structure of the mutant D75N I-CreI in complex with its wild- type target in absence of metal ions at the active site (The four central bases, 2NN region, are composed by GTAC from 5' to 3')
分子名称: 24MER DNA, DNA ENDONUCLEASE I-CREI, GLYCEROL
著者Molina, R, Redondo, P, Stella, S, Marenchino, M, D'Abramo, M, Gervasio, F.L, Epinat, J.C, Valton, J, Grizot, S, Duchateau, P, Prieto, J, Montoya, G.
登録日2011-12-01
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Non-Specific Protein-DNA Interactions Control I-Crei Target Binding and Cleavage.
Nucleic Acids Res., 40, 2012
4D6O
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BU of 4d6o by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 1H INCUBATION IN 5MM MG (STATE 2)
分子名称: 25MER, ACETATE ION, HOMING ENDONUCLEASE I-DMOI, ...
著者Molina, R, Stella, S, Redondo, P, Gomez, H, Marcaida, M.J, Orozco, M, Prieto, J, Montoya, G.
登録日2014-11-13
公開日2014-12-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Visualizing Phosphodiester-Bond Hydrolysis by an Endonuclease.
Nat.Struct.Mol.Biol., 22, 2015
4D6N
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BU of 4d6n by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 DAYS INCUBATION IN 5MM MG (STATE 7)
分子名称: 5'-D(*DCP*CP*GP*GP*CP*AP*AP*GP*GP*CP)-3', 5'-D(*DCP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*DAP*C)-3', 5'-D(*DGP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*DAP)-3', ...
著者Molina, R, Stella, S, Redondo, P, Gomez, H, Marcaida, M.J, Orozco, M, Prieto, J, Montoya, G.
登録日2014-11-13
公開日2014-12-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Visualizing Phosphodiester-Bond Hydrolysis by an Endonuclease.
Nat.Struct.Mol.Biol., 22, 2015
6GTC
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BU of 6gtc by Molmil
Transition state structure of Cpf1(Cas12a) I1 conformation
分子名称: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*GP*AP*GP*CP*TP*CP*GP*TP*TP*AP*GP*AP*GP*AP*AP*G)-3'), DNA (5'-D(P*TP*GP*AP*CP*TP*TP*CP*TP*CP*TP*AP*AP*CP*AP*AP*GP*CP*TP*CP*G)-3'), ...
著者Mesa, P, Montoya, G.
登録日2018-06-18
公開日2018-12-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Conformational Activation Promotes CRISPR-Cas12a Catalysis and Resetting of the Endonuclease Activity.
Cell, 175, 2018
6GTD
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BU of 6gtd by Molmil
Transient state structure of CRISPR-Cpf1 (Cas12a) I2 conformation
分子名称: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*GP*AP*GP*CP*TP*CP*GP*TP*TP*AP*GP*AP*GP*AP*AP*GP*T)-3'), DNA (5'-D(P*TP*GP*AP*CP*TP*TP*CP*TP*CP*TP*AP*AP*CP*AP*AP*GP*CP*TP*CP*G)-3'), ...
著者Montoya, G, Mesa, P.
登録日2018-06-18
公開日2018-12-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.24 Å)
主引用文献Conformational Activation Promotes CRISPR-Cas12a Catalysis and Resetting of the Endonuclease Activity.
Cell, 175, 2018
6DTD
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BU of 6dtd by Molmil
High-resolution crystal structure of Cas13b from Prevotella buccae
分子名称: CHLORIDE ION, CITRIC ACID, RNA (37-MER), ...
著者Slaymaker, I.M.S, Zhang, F.Z.
登録日2018-06-15
公開日2019-02-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献High-Resolution Structure of Cas13b and Biochemical Characterization of RNA Targeting and Cleavage.
Cell Rep, 26, 2019
5E3L
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BU of 5e3l by Molmil
Crystal structure of Fis bound to 27bp DNA F1-8G (AAATTGGTTTGAATTTTGAGCCAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-10-03
公開日2016-03-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5DTD
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BU of 5dtd by Molmil
Crystal structure of Fis bound to 27bp DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-09-17
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5DS9
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BU of 5ds9 by Molmil
Crystal structure of Fis bound to 27bp DNA F1-8A (AAATTAGTTTGAATTTTGAGCTAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-09-17
公開日2016-07-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.561 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5E3N
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BU of 5e3n by Molmil
Crystal structure of Fis bound to 27bp DNA F31 (AAATTTGTAGGAATTTTCTGCAAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-10-03
公開日2016-03-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
5E3O
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BU of 5e3o by Molmil
Crystal structure of Fis bound to 27bp DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT)
分子名称: DNA (27-MER), DNA-binding protein Fis
著者Hancock, S.P, Cascio, D, Johnson, R.C.
登録日2015-10-03
公開日2016-03-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.
Plos One, 11, 2016
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