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3HVA
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BU of 3hva by Molmil
Crystal structure of FimX GGDEF domain from Pseudomonas aeruginosa
分子名称: Protein FimX
著者Navarro, M.V.A.S, De, N, Bae, N, Sondermann, H.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.042 Å)
主引用文献Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX.
Structure, 17, 2009
8Z3F
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BU of 8z3f by Molmil
Complex structure of CIB2 and TMC1 CR1
分子名称: CALCIUM ION, Calcium and integrin-binding family member 2, Transmembrane channel-like protein 1
著者Wu, S, Lin, L, Lu, Q.
登録日2024-04-15
公開日2025-02-19
最終更新日2025-06-25
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Mechano-electrical transduction components TMC1-CIB2 undergo a Ca 2+ -induced conformational change linked to hearing loss.
Dev.Cell, 60, 2025
8WHA
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BU of 8wha by Molmil
Structure of DDM1-nucleosome complex in the ADP-BeFx state with DDM1 bound to SHL2 and SHL-2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ...
著者Liu, Y, Zhang, Z, Du, J.
登録日2023-09-22
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Nat.Plants, 10, 2024
8WH5
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BU of 8wh5 by Molmil
Structure of DDM1-nucleosome complex in the apo state
分子名称: ATP-dependent DNA helicase DDM1, DNA (antisense strand), DNA (sense strand), ...
著者Liu, Y, Zhang, Z, Du, J.
登録日2023-09-22
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Nat.Plants, 10, 2024
8WHB
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BU of 8whb by Molmil
Structure of nucleosome core particle of Arabidopsis thaliana
分子名称: DNA (antisense strand), DNA (sense strand), Histone H2A.6, ...
著者Liu, Y, Zhang, Z, Du, J.
登録日2023-09-23
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Nat.Plants, 10, 2024
8WH8
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BU of 8wh8 by Molmil
Structure of DDM1-nucleosome complex in ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, DNA (antisense strand), ...
著者Liu, Y, Zhang, Z, Du, J.
登録日2023-09-22
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Nat.Plants, 10, 2024
8WH9
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BU of 8wh9 by Molmil
Structure of DDM1-nucleosome complex in ADP-BeFx state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ...
著者Liu, Y, Zhang, Z, Du, J.
登録日2023-09-22
公開日2024-04-17
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
Nat.Plants, 10, 2024
7DWO
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BU of 7dwo by Molmil
Crystal structure of Vibrio fischeri DarR in complex with DNA reveals the transcriptional activation mechanism of LTTR family members
分子名称: Predicted DNA-binding transcriptional regulator
著者Wang, W.W, Wu, H, He, J.H, Yu, F.
登録日2021-01-17
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Crystal structure details of Vibrio fischeri DarR and mutant DarR-M202I from LTTR family reveals their activation mechanism.
Int.J.Biol.Macromol., 183, 2021
7DWN
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BU of 7dwn by Molmil
Crystal structure of Vibrio fischeri DarR in complex with DNA reveals the transcriptional activation mechanism of LTTR family members
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Predicted DNA-binding transcriptional regulator
著者Wang, W.W, Wu, H, He, J.H, Yu, F.
登録日2021-01-17
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal structure details of Vibrio fischeri DarR and mutant DarR-M202I from LTTR family reveals their activation mechanism.
Int.J.Biol.Macromol., 183, 2021
8WEC
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BU of 8wec by Molmil
Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with BAK1 ectodomain and SCOOP12
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
8WEB
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BU of 8web by Molmil
Crystal structure of Arabidopsis thaliana MIK2 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MDIS1-interacting receptor like kinase 2
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
8WED
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BU of 8wed by Molmil
Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with BAK1 ectodomain and Fusarium oxysporum SCOOPL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
8WEF
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BU of 8wef by Molmil
Crystal structure of Brassica napus MIK2 ectodomain in complex with Fusarium oxysporum SCOOPL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
8WEI
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BU of 8wei by Molmil
Crystal structure of Brassica napus MIK2 ectodomain (N393D mutant)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
8WEG
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BU of 8weg by Molmil
Crystal structure of Brassica napus MIK2 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
3HV8
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BU of 3hv8 by Molmil
Crystal structure of FimX EAL domain from Pseudomonas aeruginosa bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Protein FimX
著者Navarro, M.V.A.S, De, N, Bae, N, Sondermann, H.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.445 Å)
主引用文献Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX.
Structure, 17, 2009
8WEH
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BU of 8weh by Molmil
Crystal structure of Brassica napus MIK2 ectodomain (N393A mutant)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
8WEE
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BU of 8wee by Molmil
Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with SCOOP12
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wan, L.H, Hu, Y.X, Wu, H.M.
登録日2023-09-17
公開日2024-11-06
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation.
Nat.Plants, 10, 2024
7EO8
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BU of 7eo8 by Molmil
Crystal structure of SARS coronavirus main protease in complex with an inhibitor Shikonin
分子名称: 2-[(1R)-4-methyl-1-oxidanyl-pent-3-enyl]-5,8-bis(oxidanyl)naphthalene-1,4-dione, 3C-like proteinase
著者Zhang, Y.T, Gao, H.X, Zhou, H, Zhong, F.L, Hu, X.H, Zhou, X.L, Lin, C, Wang, Q.S, Li, J, Zhang, J.
登録日2021-04-21
公開日2021-10-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2808516 Å)
主引用文献Structure-Based Discovery and Structural Basis of a Novel Broad-Spectrum Natural Product against the Main Protease of Coronavirus.
J.Virol., 96, 2022
7CJF
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BU of 7cjf by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody heavy chain, ...
著者Guo, Y, Li, X, Zhang, G, Fu, D, Schweizer, L, Zhang, H, Rao, Z.
登録日2020-07-10
公開日2020-11-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.108 Å)
主引用文献A SARS-CoV-2 neutralizing antibody with extensive Spike binding coverage and modified for optimal therapeutic outcomes.
Nat Commun, 12, 2021
7DQZ
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BU of 7dqz by Molmil
Crystal structure of SARS 3C-like protease in apo form
分子名称: 3C-like proteinase
著者Zhang, Y.T, Gao, H.X, Zhou, H, Zhong, F.L, Hu, X.H, Zhou, X.L, Lin, C, Wang, Q.S, Li, J, Zhang, J.
登録日2020-12-24
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure-Based Discovery and Structural Basis of a Novel Broad-Spectrum Natural Product against the Main Protease of Coronavirus.
J.Virol., 96, 2022
7C8D
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BU of 7c8d by Molmil
Cryo-EM structure of cat ACE2 and SARS-CoV-2 RBD
分子名称: Angiotensin-converting enzyme 2, Spike protein S1, ZINC ION
著者Gao, G.F, Wang, Q.H, Wu, L.l.
登録日2020-05-29
公開日2020-09-02
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Broad host range of SARS-CoV-2 and the molecular basis for SARS-CoV-2 binding to cat ACE2.
Cell Discov, 6, 2020
7QUO
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BU of 7quo by Molmil
FimH lectin domain in complex with oligomannose-6
分子名称: FimH, NICKEL (II) ION, SULFATE ION, ...
著者Bouckaert, J, Bourenkov, G.P.
登録日2022-01-18
公開日2023-02-01
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors
J.Biol.Chem., 299, 2023
9BLL
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BU of 9bll by Molmil
Cryo-EM of RBD(EG5.1)/1301B7 Fab Complex
分子名称: 1301B7 Heavy Chain, 1301B7 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Walter, M.R, Green, T.J.
登録日2024-04-30
公開日2025-03-12
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Potent neutralization by a RBD antibody with broad specificity for SARS-CoV-2 JN.1 and other variants.
Npj Viruses, 2, 2024
7WB4
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BU of 7wb4 by Molmil
Cryo-EM structure of the NR subunit from X. laevis NPC
分子名称: GATOR complex protein SEC13, MGC154553 protein, MGC83295 protein, ...
著者Huang, G, Zhan, X, Shi, Y.
登録日2021-12-15
公開日2022-03-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Cryo-EM structure of the nuclear ring from Xenopus laevis nuclear pore complex.
Cell Res., 32, 2022

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