Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2ZMF
DownloadVisualize
BU of 2zmf by Molmil
Crystal structure of the C-terminal GAF domain of human phosphodiesterase 10A
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A
著者Handa, N, Kishishita, S, Mizohata, E, Omori, K, Kotera, J, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-17
公開日2008-04-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the GAF-B Domain from Human Phosphodiesterase 10A Complexed with Its Ligand, cAMP
J.Biol.Chem., 283, 2008
2ZBT
DownloadVisualize
BU of 2zbt by Molmil
Crystal structure of pyridoxine biosynthesis protein from Thermus thermophilus HB8
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Pyridoxal biosynthesis lyase pdxS
著者Manzoku, M, Ebihara, A, Fujimoto, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-10-29
公開日2007-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of pyridoxine biosynthesis protein from Thermus thermophilus HB8
To be Published
2ZCW
DownloadVisualize
BU of 2zcw by Molmil
Crystal Structure of TTHA1359, a Transcriptional Regulator, CRP/FNR family from Thermus thermophilus HB8
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Transcriptional regulator, FNR/CRP family
著者Agari, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-11-13
公開日2007-12-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator
Mol.Microbiol., 70, 2008
2ZIF
DownloadVisualize
BU of 2zif by Molmil
Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8- Complexed with S-Adenosyl-L-Methionine
分子名称: Putative modification methylase, S-ADENOSYLMETHIONINE
著者Morita, R, Ishikawa, H, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-02-15
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
2ZVC
DownloadVisualize
BU of 2zvc by Molmil
Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
分子名称: Precorrin-3 C17-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-11-04
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
To be published
2ZG6
DownloadVisualize
BU of 2zg6 by Molmil
Crystal structure of Hypothetical protein; probable 2-haloalkanoic acid dehalogenase from Sulfolobus tokodaii
分子名称: Putative uncharacterized protein ST2620
著者Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-01-18
公開日2008-07-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Hypothetical protein; probable 2-haloalkanoic acid dehalogenase from Sulfolobus tokodaii
To be Published
1V2Y
DownloadVisualize
BU of 1v2y by Molmil
Solution Structure of Mouse Hypothetical Gene (RIKEN cDNA 3300001G02) Product Homologous to Ubiquitin Fold
分子名称: 3300001G02Rik protein
著者Zhao, C, Kigawa, T, Tomizawa, T, Koshiba, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-17
公開日2004-04-17
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of Mouse Hypothetical Gene (RIKEN cDNA 3300001G02) Product Homologous to Ubiquitin Fold
To be Published
2ZKX
DownloadVisualize
BU of 2zkx by Molmil
Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121
分子名称: COPPER (I) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Yoshikawa, S, Kukimoto-Niino, M, Ito, K, Chen, L, Fu, Z.Q, Chrzas, J, Wang, B.C, Shirouzu, M, Urushitani, M, Takahashi, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-03-31
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121
To be Published
2Z1M
DownloadVisualize
BU of 2z1m by Molmil
Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
分子名称: GDP-D-mannose dehydratase, GUANOSINE-5'-DIPHOSPHATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-09
公開日2007-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
To be Published
2Z5U
DownloadVisualize
BU of 2z5u by Molmil
Crystal structure of Lysine-specific histone demethylase 1
分子名称: FAD-trans-2-Phenylcyclopropylamine Adduct, Lysine-specific histone demethylase 1
著者Mimasu, S, Sengoku, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-07-17
公開日2008-04-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of histone demethylase LSD1 and tranylcypromine at 2.25 A
Biochem.Biophys.Res.Commun., 366, 2008
2ZIE
DownloadVisualize
BU of 2zie by Molmil
Crystal Structure of TTHA0409, Putatative DNA Modification Methylase from Thermus thermophilus HB8- Selenomethionine derivative
分子名称: Putative modification methylase
著者Morita, R, Ishikawa, H, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-02-15
公開日2008-07-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
2ZUL
DownloadVisualize
BU of 2zul by Molmil
Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533) in complex with cofactor S-adenosyl-L-Methionine
分子名称: Probable ribosomal RNA small subunit methyltransferase, S-ADENOSYLMETHIONINE
著者Wang, H, Kawazoe, M, Tatsuguchi, A, Naoe, C, Takemoto, C, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-10-21
公開日2009-10-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533) in complex with cofactor S-adenosyl-L-Methionine
To be Published
2Z34
DownloadVisualize
BU of 2z34 by Molmil
Crystal structure of SpCia1/Asf1 complex with Hip1
分子名称: Histone chaperone cia1, Protein hir1
著者Malay, A.D, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-31
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of fission yeast histone chaperone Asf1 complexed with the Hip1 B-domain or the Cac2 C terminus
J.Biol.Chem., 283, 2008
2Z3F
DownloadVisualize
BU of 2z3f by Molmil
Crystal structure of spCia1/Asf1 complexed with Cac2 peptide
分子名称: Histone chaperone cia1, SPAC26H5.03 protein
著者Malay, A.D, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-06-04
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Fission Yeast Histone Chaperone Asf1 Complexed with the Hip1 B-domain or the Cac2 C Terminus
J.Biol.Chem., 283, 2008
2H09
DownloadVisualize
BU of 2h09 by Molmil
Crystal structure of diphtheria toxin repressor like protein from E. coli
分子名称: Transcriptional regulator mntR
著者Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-05-14
公開日2007-05-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the manganese transport regulatory protein from Escherichia coli.
Proteins, 2009
2ZKW
DownloadVisualize
BU of 2zkw by Molmil
Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group P21
分子名称: COPPER (I) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Yoshikawa, S, Kukimoto-Niino, M, Ito, K, Chen, L, Fu, Z.Q, Chrzas, J, Wang, B.C, Shirouzu, M, Urushitani, M, Takahashi, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-03-31
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group P21
To be Published
2ZDH
DownloadVisualize
BU of 2zdh by Molmil
Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ...
著者Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-11-22
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8
To be Published
2ZR2
DownloadVisualize
BU of 2zr2 by Molmil
Crystal structure of seryl-tRNA synthetase from Pyrococcus horikoshii complexed with ATP
分子名称: ADENOSINE MONOPHOSPHATE, SULFATE ION, Seryl-tRNA synthetase
著者Itoh, Y, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-08-22
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii.
Rna Biol., 5, 2008
2ZM6
DownloadVisualize
BU of 2zm6 by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Kaminishi, T, Wang, H, Kawazoe, M, Ishii, R, Schluenzen, F, Hanawa-Suetsugu, K, Wilson, D.N, Nomura, M, Takemoto, C, Shirouzu, M, Fucini, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-11
公開日2009-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of the Thermus thermophilus 30S ribosomal subunit
To be Published
2ZWV
DownloadVisualize
BU of 2zwv by Molmil
Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)
分子名称: Probable ribosomal RNA small subunit methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Wang, H, Kawazoe, M, Kaminishi, T, Tatsuguchi, A, Naoe, C, Terada, T, Shirouzu, M, Takemoto, C, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-12-18
公開日2009-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)
to be published
3AJI
DownloadVisualize
BU of 3aji by Molmil
Structure of Gankyrin-S6ATPase photo-cross-linked site-specifically, and incoporated by genetic code expansion
分子名称: 26S proteasome non-ATPase regulatory subunit 10, Proteasome (Prosome, macropain) 26S subunit, ...
著者Sato, S, Mimasu, S, Sato, A, Hino, N, Sakamoto, K, Umehara, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-07
公開日2010-12-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic study of a site-specifically cross-linked protein complex with a genetically incorporated photoreactive amino acid
Biochemistry, 50, 2011
3AJD
DownloadVisualize
BU of 3ajd by Molmil
Crystal structure of ATRM4
分子名称: GLYCEROL, ISOPROPYL ALCOHOL, Putative methyltransferase MJ0026
著者Hirano, M, Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-01
公開日2010-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Crystal structure of Methanocaldococcus jannaschii Trm4 complexed with sinefungin.
J.Mol.Biol., 401, 2010
3AAL
DownloadVisualize
BU of 3aal by Molmil
Crystal Structure of endonuclease IV from Geobacillus kaustophilus
分子名称: CACODYLATE ION, FE (III) ION, Probable endonuclease 4, ...
著者Asano, R, Ishikawa, H, Nakane, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-11-20
公開日2010-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
3ABU
DownloadVisualize
BU of 3abu by Molmil
Crystal Structure of LSD1 in complex with a 2-PCPA derivative, S1201
分子名称: Lysine-specific histone demethylase 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-5-[(1R,3R,3aS)-3-[2-(benzyloxy)-3-fluorophenyl]-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate
著者Mimasu, S, Umezawa, N, Sato, S, Higuchi, T, Umehara, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-12-21
公開日2010-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structurally Designed trans-2-Phenylcyclopropylamine Derivatives Potently Inhibit Histone Demethylase LSD1/KDM1
Biochemistry, 49, 2010
3ACC
DownloadVisualize
BU of 3acc by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with GMP from Thermus thermophilus HB8
分子名称: 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-MONOPHOSPHATE, Hypoxanthine-guanine phosphoribosyltransferase
著者Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-12-30
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon