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8I4S
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the complex structure of SARS-CoV-2 Mpro with D8
分子名称: 3-(4-fluoranyl-3-methyl-phenyl)-2-(2-methylpropyl)-5,6,7-tris(oxidanyl)quinazolin-4-one, ORF1a polyprotein
著者Lu, M.
登録日2023-01-21
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of quinazolin-4-one-based non-covalent inhibitors targeting the severe acute respiratory syndrome coronavirus 2 main protease (SARS-CoV-2 M pro ).
Eur.J.Med.Chem., 257, 2023
3J26
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BU of 3j26 by Molmil
The 3.5 A resolution structure of the Sputnik virophage by cryo-EM
分子名称: Minor virion protein, capsid protein V20
著者Zhang, X.Z.
登録日2012-09-18
公開日2012-10-24
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of Sputnik, a virophage, at 3.5-A resolution.
Proc.Natl.Acad.Sci.USA, 109, 2012
6ACG
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BU of 6acg by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-bound conformation 1
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Gui, M, Song, W.
登録日2018-07-26
公開日2018-08-08
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
6ACD
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BU of 6acd by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-free conformation with one RBD in up conformation
分子名称: Spike glycoprotein
著者Gui, M, Song, W.
登録日2018-07-26
公開日2018-08-08
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
6ACC
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BU of 6acc by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-free conformation with three RBD in down conformation
分子名称: Spike glycoprotein
著者Gui, M, Song, W.
登録日2018-07-26
公開日2018-08-08
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
7Y1A
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Lateral hexamer
分子名称: B-phycoerythrin beta chain, LRH, PHYCOERYTHROBILIN, ...
著者You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sun, S, Sui, S.F.
登録日2022-06-07
公開日2023-01-18
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Nature, 616, 2023
7Y7A
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In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
分子名称: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (2S)-2,3-dihydroxypropyl octadecanoate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sun, S, Sui, S.F.
登録日2022-06-22
公開日2023-02-08
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Nature, 616, 2023
6ACJ
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Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-bound conformation 2
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Gui, M, Song, W.
登録日2018-07-26
公開日2018-08-08
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
6ACK
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BU of 6ack by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-bound conformation 3
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Gui, M, Song, W.
登録日2018-07-26
公開日2018-08-08
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
7Y4L
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BU of 7y4l by Molmil
PBS of PBS-PSII-PSI-LHCs from Porphyridium purpureum.
分子名称: Allophycocyanin alpha subunit, Allophycocyanin beta 18 subunit, Allophycocyanin beta subunit, ...
著者You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sun, S, Sui, S.F.
登録日2022-06-15
公開日2023-01-18
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Nature, 616, 2023
7Y5E
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BU of 7y5e by Molmil
In situ single-PBS-PSII-PSI-LHCs megacomplex.
分子名称: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (2S)-2,3-dihydroxypropyl octadecanoate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sui, S.F.
登録日2022-06-17
公開日2023-02-01
最終更新日2023-04-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Nature, 616, 2023
6B9J
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BU of 6b9j by Molmil
Structure of vaccinia virus D8 protein bound to human Fab vv138
分子名称: Fab vv138 Heavy chain, Fab vv138 Light chain, GLYCEROL, ...
著者Zajonc, D.M.
登録日2017-10-10
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-function characterization of three human antibodies targeting the vaccinia virus adhesion molecule D8.
J. Biol. Chem., 293, 2018
6B4U
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BU of 6b4u by Molmil
Crystal structure of MCL-1 in complex with a BIM competitive inhibitor
分子名称: 7-(2-methylphenyl)-1-[2-(morpholin-4-yl)ethyl]-3-{3-[(naphthalen-1-yl)oxy]propyl}-1H-indole-2-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Judge, R.A, Souers, A.J.
登録日2017-09-27
公開日2017-10-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-guided design of a series of MCL-1 inhibitors with high affinity and selectivity.
J. Med. Chem., 58, 2015
6B4L
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BU of 6b4l by Molmil
Crystal structure of MCL-1 in complex with a BIM competitive inhibitor
分子名称: 3-{3-[(naphthalen-1-yl)oxy]propyl}-1H-indole-2-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Judge, R.A, Souers, A.J.
登録日2017-09-26
公開日2017-10-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-guided design of a series of MCL-1 inhibitors with high affinity and selectivity.
J. Med. Chem., 58, 2015
7W2B
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BU of 7w2b by Molmil
The closed conformation of the sigma-1 receptor from Xenopus laevis
分子名称: GOLD ION, Sigma non-opioid intracellular receptor 1, octyl beta-D-glucopyranoside
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.203 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7W2C
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The closed conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084
分子名称: 2-morpholin-4-ylethyl 1-phenylcyclohexane-1-carboxylate, GOLD ION, Sigma non-opioid intracellular receptor 1, ...
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.335 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7W2E
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An open-like conformation of the sigma-1 receptor from Xenopus laevis
分子名称: Sigma non-opioid intracellular receptor 1
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.557 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7W2G
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BU of 7w2g by Molmil
An open-like conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084 by soaking
分子名称: 2-morpholin-4-ylethyl 1-phenylcyclohexane-1-carboxylate, Sigma non-opioid intracellular receptor 1, octyl beta-D-glucopyranoside
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.851 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7W2H
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A double cysteine variant of the sigma-1 receptor from Xenopus laevis complexed with S1RA
分子名称: 4-[2-(5-methyl-1-naphthalen-2-yl-pyrazol-3-yl)oxyethyl]morpholine, Sigma non-opioid intracellular receptor 1
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.796 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7W2D
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BU of 7w2d by Molmil
The closed conformation of the sigma-1 receptor from Xenopus laevis complexed with S1RA
分子名称: 4-[2-(5-methyl-1-naphthalen-2-yl-pyrazol-3-yl)oxyethyl]morpholine, GOLD ION, Sigma non-opioid intracellular receptor 1
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.471 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7W2F
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BU of 7w2f by Molmil
An open-like conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084 by co-crystallization
分子名称: 2-morpholin-4-ylethyl 1-phenylcyclohexane-1-carboxylate, Sigma non-opioid intracellular receptor 1, octyl beta-D-glucopyranoside
著者Meng, F, Sun, Z, Zhou, X.
登録日2021-11-23
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
6LH8
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Structure of aerolysin-like protein (Bombina maxima)
分子名称: aerolysin-like protein
著者Bian, X.L, Wang, Q.Q, Li, X, Teng, M.Q, Zhang, Y.
登録日2019-12-07
公開日2020-06-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.729 Å)
主引用文献A cellular endolysosome-modulating pore-forming protein from a toad is negatively regulated by its paralog under oxidizing conditions.
J.Biol.Chem., 295, 2020
6LHZ
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Structure of aerolysin-like protein (Bombina maxima)
分子名称: aerolysin-like protein
著者Bian, X.L, Wang, Q.Q, Li, X, Teng, M.Q, Zhang, Y.
登録日2019-12-10
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献A cellular endolysosome-modulating pore-forming protein from a toad is negatively regulated by its paralog under oxidizing conditions.
J.Biol.Chem., 295, 2020
7WKU
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Structure of PDCoV Mpro in complex with an inhibitor
分子名称: N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE, Peptidase C30
著者Wang, F.H, Yang, H.T.
登録日2022-01-11
公開日2022-05-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Structure of the Porcine Deltacoronavirus Main Protease Reveals a Conserved Target for the Design of Antivirals.
Viruses, 14, 2022
7CKF
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The N-terminus of interferon-inducible antiviral protein-dimer
分子名称: ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, Guanylate-binding protein 5, ...
著者Cui, W, Yang, H.T.
登録日2020-07-16
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.284 Å)
主引用文献Structural basis for GTP-induced dimerization and antiviral function of guanylate-binding proteins.
Proc.Natl.Acad.Sci.USA, 118, 2021

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