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4KEH
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BU of 4keh by Molmil
Crosslinked Crystal Structure of Type II Fatty Synthase Dehydratase, FabA, and Acyl Carrier Protein, AcpP
分子名称: Acyl carrier protein, N-{3-[DIHYDROXY(NONYL)-LAMBDA~4~-SULFANYL]PROPYL}-N~3~-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANINAMIDE, N-{3-[dihydroxy(nonyl)-lambda~4~-sulfanyl]propyl}-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
著者Nguyen, C, Haushalter, R, Finzel, K, Leong, J, Le, B.C, Burkart, M, Tsai, S.C.
登録日2013-04-25
公開日2013-12-25
最終更新日2014-01-29
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Trapping the dynamic acyl carrier protein in fatty acid biosynthesis.
Nature, 505, 2014
4M4V
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BU of 4m4v by Molmil
Structural evaluation R171L mutant of the aspergillus fumigatus kdnase (sialidase)
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, Extracellular sialidase/neuraminidase, putative, ...
著者Telford, J.C, Taylor, G.L.
登録日2013-08-07
公開日2014-09-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Active site mutants of a fungal KDNase
To be Published
3WA6
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BU of 3wa6 by Molmil
Crystal structure of tannase from Lactobacillus plantarum in the orthorhombic crystal
分子名称: SULFATE ION, tannase
著者Matoba, Y, Tanaka, N, Sugiyama, M.
登録日2013-04-27
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and mutational analyses of tannase from Lactobacillus plantarum
Proteins, 81, 2013
3WSW
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BU of 3wsw by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-bound form
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, L-lactate dehydrogenase, ...
著者Matoba, Y, Sugiyama, M.
登録日2014-03-27
公開日2014-09-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3WSV
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BU of 3wsv by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-unbound form
分子名称: GLYCEROL, L-lactate dehydrogenase
著者Matoba, Y, Sugiyama, M.
登録日2014-03-27
公開日2014-09-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3WA7
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BU of 3wa7 by Molmil
Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Matoba, Y, Tanaka, N, Sugiyama, M.
登録日2013-04-27
公開日2013-07-24
最終更新日2013-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic and mutational analyses of tannase from Lactobacillus plantarum.
Proteins, 81, 2013
5UM9
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BU of 5um9 by Molmil
Flap endonuclease 1 (FEN1) D86N with 5'-flap substrate DNA and Sm3+
分子名称: DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*CP*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3'), ...
著者Tsutakawa, S.E, Arvai, A.S, Tainer, J.A.
登録日2017-01-26
公開日2017-06-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Phosphate steering by Flap Endonuclease 1 promotes 5'-flap specificity and incision to prevent genome instability.
Nat Commun, 8, 2017
6HUW
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BU of 6huw by Molmil
Crystal structure of CdaA from Bacillus subtilis
分子名称: Diadenylate cyclase
著者Tosi, T, Freemont, P.S, Grundling, A.
登録日2018-10-09
公開日2019-10-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献CdaA/GlmM complex in Bacillus subtilis
To Be Published
2N42
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BU of 2n42 by Molmil
EC-NMR Structure of Human H-RasT35S mutant protein Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data
分子名称: GTPase HRas
著者Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2015-06-16
公開日2015-07-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
2N46
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BU of 2n46 by Molmil
EC-NMR Structure of Human H-RasT35S mutant protein Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data
分子名称: GTPase HRas
著者Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2015-06-17
公開日2015-07-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
1AK2
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BU of 1ak2 by Molmil
ADENYLATE KINASE ISOENZYME-2
分子名称: ADENYLATE KINASE ISOENZYME-2, SULFATE ION
著者Schlauderer, G.J, Schulz, G.E.
登録日1995-12-29
公開日1996-06-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The structure of bovine mitochondrial adenylate kinase: comparison with isoenzymes in other compartments.
Protein Sci., 5, 1996
2YR3
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BU of 2yr3 by Molmil
Solution structure of the fourth Ig-like domain from myosin light chain kinase, smooth muscle
分子名称: Myosin light chain kinase, smooth muscle
著者Qin, X.R, Kurosaki, C, Yoshida, M, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-02
公開日2007-10-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the fourth Ig-like domain from myosin light chain kinase, smooth muscle
To be Published
2YSZ
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BU of 2ysz by Molmil
Solution structure of the chimera of the C-terminal PID domain of Fe65L and the C-terminal tail peptide of APP
分子名称: Amyloid beta A4 precursor protein-binding family B member 2 and Amyloid beta A4 protein
著者Li, H, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
5WVO
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BU of 5wvo by Molmil
Crystal structure of DNMT1 RFTS domain in complex with K18/K23 mono-ubiquitylated histone H3
分子名称: DNA (cytosine-5)-methyltransferase 1, Histone H3.1, Ubiquitin, ...
著者Ishiyama, S, Nishiyama, A, Nakanishi, M, Arita, K.
登録日2016-12-28
公開日2017-11-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献Structure of the Dnmt1 Reader Module Complexed with a Unique Two-Mono-Ubiquitin Mark on Histone H3 Reveals the Basis for DNA Methylation Maintenance
Mol. Cell, 68, 2017
2ZFW
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BU of 2zfw by Molmil
Crystal structure of Pex from Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2)
分子名称: Pex, SULFATE ION
著者Kouyama, T.
登録日2008-01-14
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Functionally important structural elements of the cyanobacterial clock-related protein Pex.
Genes Cells, 14, 2009
5ZK4
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BU of 5zk4 by Molmil
The structure of DSZS acyltransferase with carrier protein
分子名称: DisA protein, DisD protein, N-[2-(acetylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
著者Miyanaga, A, Ouchi, R, Kudo, F, Eguchi, T.
登録日2018-03-23
公開日2018-06-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural basis of protein-protein interactions between a trans-acting acyltransferase and acyl carrier protein in polyketide disorazole biosynthesis
J. Am. Chem. Soc., 140, 2018
5ZC6
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BU of 5zc6 by Molmil
Solution structure of H-RasT35S mutant protein in complex with KBFM123
分子名称: 3-oxidanyl-~{N}-[[(2~{R})-oxolan-2-yl]methyl]naphthalene-2-carboxamide, GTPase HRas, MAGNESIUM ION, ...
著者Matsumoto, S, Hayashi, Y, Hiraga, T, Matsuo, K, Kataoka, T.
登録日2018-02-15
公開日2018-09-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Molecular Basis for Allosteric Inhibition of GTP-Bound H-Ras Protein by a Small-Molecule Compound Carrying a Naphthalene Ring
Biochemistry, 57, 2018
2EQI
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BU of 2eqi by Molmil
Solution structure of the SH3 domain from Phospholipase C, gamma 2
分子名称: Phospholipase C, gamma 2
著者Qin, X.R, Nagashima, T, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the SH3 domain from Phospholipase C, gamma 2
To be Published
2EQZ
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BU of 2eqz by Molmil
Solution structure of the first HMG-box domain from high mobility group protein B3
分子名称: High mobility group protein B3
著者Qin, X.R, Kurosaki, C, Yoshida, M, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2008-04-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first HMG-box domain from high mobility group protein B3
To be Published
2YQI
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BU of 2yqi by Molmil
Solution structure of the second HMG-box domain from high mobility group protein B3
分子名称: High mobility group protein B3
著者Qin, X.R, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2008-04-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second HMG-box domain from high mobility group protein B3
To be Published
2YSR
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BU of 2ysr by Molmil
Solution structure of the DEP domain from human DEP domain-containing protein 1
分子名称: DEP domain-containing protein 1
著者Zhang, H.P, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain from human DEP domain-containing protein 1
To be Published
2DQL
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BU of 2dql by Molmil
Crystal structure of the circadian clock associated protein Pex from anabaena
分子名称: PHOSPHATE ION, Pex protein
著者Kurosawa, S, Kouyama, T.
登録日2006-05-29
公開日2007-05-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Functionally important structural elements of the cyanobacterial clock-related protein Pex.
Genes Cells, 14, 2009
3AWT
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BU of 3awt by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie soaked in a Cu(II)-containing solution for 20 hr: occupancy of Cu(II) is high
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWY
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BU of 3awy by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie M84L mutant soaked in a Cu(II)-containing solution for 80 hr
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011
3AWW
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BU of 3aww by Molmil
Crystal structure of Streptomyces tyrosinase in a complex with caddie soaked in a Cu(II)-containing solution for 80 hr: occupancy of CuA is high
分子名称: COPPER (II) ION, MelC, NITRATE ION, ...
著者Matoba, Y, Sugiyama, M.
登録日2011-03-26
公開日2011-06-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
J.Biol.Chem., 286, 2011

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