Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5YGU
DownloadVisualize
BU of 5ygu by Molmil
Crystal structure of Escherichia coli (strain K12) mRNA Decapping Complex RppH-DapF
分子名称: Diaminopimelate epimerase, IODIDE ION, L(+)-TARTARIC ACID, ...
著者Wang, Q, Guan, Z.Y, Zhang, D.L, Zou, T.T, Yin, P.
登録日2017-09-27
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli.
Nucleic Acids Res., 46, 2018
6XZ8
DownloadVisualize
BU of 6xz8 by Molmil
Structure of aldosterone synthase (CYP11B2) in complex with N-[(1R)-1-[5-(6-chloro-1,1-dimethyl-3-oxo-isoindolin-2-yl)-3-pyridyl]ethyl]methanesulfonamide
分子名称: Cytochrome P450 11B2, mitochondrial, HEME C, ...
著者Kuglstatter, A, Joseph, C, Benz, J.
登録日2020-02-03
公開日2020-06-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Discovery of 3-Pyridyl Isoindolin-1-one Derivatives as Potent, Selective, and Orally Active Aldosterone Synthase (CYP11B2) Inhibitors.
J.Med.Chem., 63, 2020
3A9U
DownloadVisualize
BU of 3a9u by Molmil
Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate--CoA ligase
分子名称: 4-coumarate--CoA ligase
著者Hu, Y.
登録日2009-11-06
公開日2010-09-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of a Populus tomentosa 4-coumarate:CoA ligase shed light on its enzymatic mechanisms
Plant Cell, 22, 2010
3VK6
DownloadVisualize
BU of 3vk6 by Molmil
Crystal structure of a phosphotyrosine binding domain
分子名称: E3 ubiquitin-protein ligase Hakai, ZINC ION
著者Sivaraman, J, Mukherjee, M.
登録日2011-11-09
公開日2012-01-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a novel phosphotyrosine-binding domain in Hakai that targets E-cadherin
Embo J., 31, 2012
3A9V
DownloadVisualize
BU of 3a9v by Molmil
Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate--CoA ligase
分子名称: 4-coumarate--CoA ligase, ADENOSINE MONOPHOSPHATE
著者Hu, Y.
登録日2009-11-06
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of a Populus tomentosa 4-coumarate:CoA ligase shed light on its enzymatic mechanisms
Plant Cell, 22, 2010
6X2A
DownloadVisualize
BU of 6x2a by Molmil
SARS-CoV-2 u1S2q 1-RBD Up Spike Protein Trimer
分子名称: Spike glycoprotein
著者Henderson, R, Acharya, P.
登録日2020-05-20
公開日2020-05-27
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Controlling the SARS-CoV-2 spike glycoprotein conformation.
Nat.Struct.Mol.Biol., 27, 2020
7EMN
DownloadVisualize
BU of 7emn by Molmil
The atomic structure of SHP2 E76A mutant
分子名称: Tyrosine-protein phosphatase non-receptor type 11
著者Luo, F, Xie, J.J, Zhu, J.D, Liu, C.
登録日2021-04-14
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A novel partially open state of SHP2 points to a "multiple gear" regulation mechanism.
J.Biol.Chem., 296, 2021
6XZ9
DownloadVisualize
BU of 6xz9 by Molmil
Structure of aldosterone synthase (CYP11B2) in complex with 5-chloro-3,3-dimethyl-2-[5-[1-(1-methylpyrazole-4-carbonyl)azetidin-3-yl]oxy-3-pyridyl]isoindolin-1-one
分子名称: 5-chloranyl-3,3-dimethyl-2-[5-[1-(1-methylpyrazol-4-yl)carbonylazetidin-3-yl]oxypyridin-3-yl]isoindol-1-one, Cytochrome P450 11B2, mitochondrial, ...
著者Kuglstatter, A, Joseph, C, Benz, J.
登録日2020-02-03
公開日2020-06-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Discovery of 3-Pyridyl Isoindolin-1-one Derivatives as Potent, Selective, and Orally Active Aldosterone Synthase (CYP11B2) Inhibitors.
J.Med.Chem., 63, 2020
7DAC
DownloadVisualize
BU of 7dac by Molmil
Human RIPK3 amyloid fibril revealed by solid-state NMR
分子名称: Receptor-interacting serine/threonine-protein kinase 3
著者Wu, X.L, Zhang, J, Dong, X.Q, Liu, J, Li, B, Hu, H, Wang, J, Wang, H.Y, Lu, J.X.
登録日2020-10-16
公開日2021-04-28
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献The structure of a minimum amyloid fibril core formed by necroptosis-mediating RHIM of human RIPK3.
Proc.Natl.Acad.Sci.USA, 118, 2021
6X29
DownloadVisualize
BU of 6x29 by Molmil
SARS-CoV-2 rS2d Down State Spike Protein Trimer
分子名称: Spike glycoprotein
著者Henderson, R, Acharya, P.
登録日2020-05-20
公開日2020-05-27
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Controlling the SARS-CoV-2 spike glycoprotein conformation.
Nat.Struct.Mol.Biol., 27, 2020
7EO0
DownloadVisualize
BU of 7eo0 by Molmil
FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY C4
分子名称: Ig heavy chain variable region, Ig lamda chain variable region, O/TIBET/99 VP1, ...
著者He, Y, Li, K.
登録日2021-04-21
公開日2021-08-18
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Two Cross-Protective Antigen Sites on Foot-and-Mouth Disease Virus Serotype O Structurally Revealed by Broadly Neutralizing Antibodies from Cattle.
J.Virol., 95, 2021
7XVV
DownloadVisualize
BU of 7xvv by Molmil
Structure of neuraminidase from influenza B-like viruses derived from spiny eel
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neuraminidase, ...
著者Chai, Y, Gao, F.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and inhibitor sensitivity analysis of influenza B-like viral neuraminidases derived from Asiatic toad and spiny eel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XVW
DownloadVisualize
BU of 7xvw by Molmil
Structure of neuraminidase from influenza B-like viruses derived from spiny eel
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(1-ACETYLAMINO-2-ETHYL-BUTYL)-4-GUANIDINO-2-HYDROXY-CYCLOPENTANECARBOXYLIC ACID, CALCIUM ION, ...
著者Chai, Y, Gao, F.
登録日2022-05-25
公開日2023-05-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural and inhibitor sensitivity analysis of influenza B-like viral neuraminidases derived from Asiatic toad and spiny eel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XVU
DownloadVisualize
BU of 7xvu by Molmil
Structure of neuraminidase from influenza B-like viruses derived from spiny eel
分子名称: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Chai, Y, Gao, F.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and inhibitor sensitivity analysis of influenza B-like viral neuraminidases derived from Asiatic toad and spiny eel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XVR
DownloadVisualize
BU of 7xvr by Molmil
Structure of neuraminidase from influenza B-like viruses derived from spiny eel
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neuraminidase
著者Chai, Y, Gao, F.
登録日2022-05-24
公開日2023-02-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and inhibitor sensitivity analysis of influenza B-like viral neuraminidases derived from Asiatic toad and spiny eel.
Proc.Natl.Acad.Sci.USA, 119, 2022
1W8D
DownloadVisualize
BU of 1w8d by Molmil
Binary structure of human DECR.
分子名称: 2,4-DIENOYL-COA REDUCTASE, MITOCHONDRIAL PRECURSOR, GLYCEROL, ...
著者Alphey, M.S, Byres, E, Hunter, W.N.
登録日2004-09-20
公開日2004-10-28
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and Reactivity of Human Mitochondrial 2,4-Dienoyl-Coa Reductase: Enzyme-Ligand Interactions in a Distinctive Short-Chain Reductase Active Site
J.Biol.Chem., 280, 2005
7YK2
DownloadVisualize
BU of 7yk2 by Molmil
Cryo-EM structure of Apo-alpha-syn fibril
分子名称: Alpha-synuclein
著者Xu, Q.H, Xia, W.C, Tao, Y.Q, Liu, C.
登録日2022-07-21
公開日2023-03-22
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Conformational Dynamics of an alpha-Synuclein Fibril upon Receptor Binding Revealed by Insensitive Nuclei Enhanced by Polarization Transfer-Based Solid-State Nuclear Magnetic Resonance and Cryo-Electron Microscopy.
J.Am.Chem.Soc., 145, 2023
7YK8
DownloadVisualize
BU of 7yk8 by Molmil
Cryo-EM structure of dLAG3-alpha-syn fibril
分子名称: Alpha-synuclein
著者Xu, Q.H, Xia, W.C, Tao, Y.Q, Liu, C.
登録日2022-07-22
公開日2023-03-22
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Conformational Dynamics of an alpha-Synuclein Fibril upon Receptor Binding Revealed by Insensitive Nuclei Enhanced by Polarization Transfer-Based Solid-State Nuclear Magnetic Resonance and Cryo-Electron Microscopy.
J.Am.Chem.Soc., 145, 2023
7XAX
DownloadVisualize
BU of 7xax by Molmil
Crystal structure of SARS coronavirus main protease in complex with Baicalei
分子名称: 3C-like proteinase nsp5, 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one
著者Zhou, X.L, Li, J, Zhang, J.
登録日2022-03-19
公開日2023-03-22
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of SARS-CoV 3C-like protease with baicalein.
Biochem.Biophys.Res.Commun., 611, 2022
1W73
DownloadVisualize
BU of 1w73 by Molmil
Binary structure of human DECR solved by SeMet SAD.
分子名称: 2,4-DIENOYL-COA REDUCTASE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Alphey, M.S, Byres, E, Hunter, W.N.
登録日2004-08-27
公開日2004-10-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Reactivity of Human Mitochondrial 2,4-Dienoyl-Coa Reductase: Enzyme-Ligand Interactions in a Distinctive Short-Chain Reductase Active Site
J.Biol.Chem., 280, 2005
8WM5
DownloadVisualize
BU of 8wm5 by Molmil
multidrug transporter EfpA from Mycobacterium tuberculosis bound with lipids
分子名称: CARDIOLIPIN, Efflux pump A, PHOSPHATIDYLETHANOLAMINE
著者Wang, S, Liao, M.
登録日2023-10-03
公開日2024-09-11
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structures of the Mycobacterium tuberculosis efflux pump EfpA reveal the mechanisms of transport and inhibition.
Nat Commun, 15, 2024
8WKW
DownloadVisualize
BU of 8wkw by Molmil
Structure of MAVS-CARD Filament
分子名称: Mitochondrial antiviral-signaling protein
著者Shi, M, Gao, P.
登録日2023-09-28
公開日2024-10-16
最終更新日2025-04-30
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Nucleic-acid-induced ZCCHC3 condensation promotes broad innate immune responses.
Mol.Cell, 85, 2025
4AEE
DownloadVisualize
BU of 4aee by Molmil
CRYSTAL STRUCTURE OF MALTOGENIC AMYLASE FROM S.MARINUS
分子名称: ALPHA AMYLASE, CATALYTIC REGION
著者Jung, T.Y, Park, C.H, Yoon, S.M, Park, S.H, Park, K.H, Woo, E.J.
登録日2012-01-10
公開日2012-01-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Association of Novel Domain in Active Site of Archaic Hyperthermophilic Maltogenic Amylase from Staphylothermus Marinus.
J.Biol.Chem., 287, 2012
8Y3X
DownloadVisualize
BU of 8y3x by Molmil
Cell divisome sPG hydrolysis machinery FtsEX-EnvC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
著者Zhang, Z, Dong, H, Chen, Y.
登録日2024-01-29
公開日2024-05-08
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structure and activity of the septal peptidoglycan hydrolysis machinery crucial for bacterial cell division.
Plos Biol., 22, 2024
8WLL
DownloadVisualize
BU of 8wll by Molmil
Cryo-EM structure of human VMAT2 Y422C, in the presence of reserpine, determined in an inward-facing conformation
分子名称: Synaptic vesicular amine transporter, reserpine
著者Qu, Q, Wang, Y, Zhou, Z.
登録日2023-09-30
公開日2024-06-12
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Transport and inhibition mechanism for VMAT2-mediated synaptic vesicle loading of monoamines.
Cell Res., 34, 2024

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon