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1VDH
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Structure-based functional identification of a novel heme-binding protein from thermus thermophilus HB8
分子名称: muconolactone isomerase-like protein
著者Ebihara, A, Okamoto, A, Kousumi, Y, Yamamoto, H, Masui, R, Ueyama, N, Shibata, T, Inoue, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-22
公開日2004-09-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.
J.STRUCT.FUNCT.GENOM., 6, 2005
1VCS
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BU of 1vcs by Molmil
Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
分子名称: Vesicle transport through interaction with t-SNAREs homolog 1A
著者Abe, T, Hirota, H, Tomizawa, T, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2005-05-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
To be Published
1SMY
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BU of 1smy by Molmil
Structural basis for transcription regulation by alarmone ppGpp
分子名称: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
著者Artsimovitch, I, Patlan, V, Sekine, S, Vassylyeva, M.N, Hosaka, T, Ochi, K, Yokoyama, S, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2004-05-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for transcription regulation by alarmone ppGpp
Cell(Cambridge,Mass.), 117, 2004
8IFJ
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BU of 8ifj by Molmil
Crystal structure of pyrrolysyl-tRNA synthetase from methanogenic archaeon ISO4-G1
分子名称: Pyrrolysyl-tRNA synthetase PylS
著者Yanagisawa, T, Tanabe, H, Yokoyama, S.
登録日2023-02-18
公開日2023-03-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal Structure of Pyrrolysyl-tRNA Synthetase from a Methanogenic Archaeon ISO4-G1 and Its Structure-Based Engineering for Highly-Productive Cell-Free Genetic Code Expansion with Non-Canonical Amino Acids.
Int J Mol Sci, 24, 2023
1V5W
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BU of 1v5w by Molmil
Crystal structure of the human Dmc1 protein
分子名称: Meiotic recombination protein DMC1/LIM15 homolog
著者Kinebuchi, T, Kagawa, W, Enomoto, R, Ikawa, S, Shibata, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-26
公開日2004-05-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for octameric ring formation and DNA interaction of the human homologous-pairing protein dmc1
Mol.Cell, 14, 2004
2EF1
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BU of 2ef1 by Molmil
Crystal structure of the extracellular domain of human CD38
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADP-ribosyl cyclase 1
著者Kukimoto-Niino, M, Nureki, O, Murayama, K, Shirouzu, M, Katada, T, Hara-Yokoyama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-20
公開日2007-02-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the extracellular domain of human CD38
To be Published
2EG9
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Crystal structure of the truncated extracellular domain of mouse CD38
分子名称: ADP-ribosyl cyclase 1
著者Kukimoto-Niino, M, Mishima, C, Wakiyama, M, Terada, T, Shirouzu, M, Hara-Yokoyama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-28
公開日2008-03-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the truncated extracellular domain of mouse CD38
To be Published
3VU8
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BU of 3vu8 by Molmil
Metionyl-tRNA synthetase from Thermus thermophilus complexed with methionyl-adenylate analogue
分子名称: Methionine--tRNA ligase, N-[METHIONYL]-N'-[ADENOSYL]-DIAMINOSULFONE, ZINC ION
著者Konno, M, Kato-Murayama, M, Toma-Fukai, S, Uchikawa, E, Nureki, O, Yokoyama, S.
登録日2012-06-22
公開日2013-06-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The modeling of structures of specific conformation of homosysteine-AMP leading to thiolactone-formation on class Ia aminoacyl-tRNA synthetases
To be Published
1WN9
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Crystal structure of the hypothetical protein TT1805 from Thermus thermophillus HB8
分子名称: ACETIC ACID, the hypothetical protein (TT1805)
著者Pioszak, A.A, Kishishita, S, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-28
公開日2005-01-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of the hypothetical protein TT1805 from Thermus thermophillus HB8
To be Published
1WNA
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BU of 1wna by Molmil
Crystal structure of the hypothetical protein TT1805 from Thermus thermophillus HB8
分子名称: the hypothetical protein (TT1805)
著者Pioszak, A.A, Kishishita, S, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-28
公開日2005-01-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of the hypothetical protein TT1805 from Thermus thermophillus HB8
To be Published
1SPK
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BU of 1spk by Molmil
Solution Structure of RSGI RUH-010, an SH3 Domain from Mouse cDNA
分子名称: RIKEN cDNA 1300006M19
著者Suzuki, Y, Abe, T, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-17
公開日2004-09-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-010, an SH3 Domain from Mouse cDNA
To be Published
1WDT
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BU of 1wdt by Molmil
Crystal structure of ttk003000868 from Thermus thermophilus HB8
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, elongation factor G homolog
著者Wang, H, Takemoto-Hori, C, Murayama, K, Sekine, S, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-17
公開日2005-05-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of ttk003000868 from Thermus thermophilus HB8
To be published
1WOT
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BU of 1wot by Molmil
Structure of putative minimal nucleotidyltransferase
分子名称: PUTATIVE MINIMAL NUCLEOTIDYLTRANSFERASE
著者Suzuki, S, Hatanaka, H, Hondoh, T, Okumura, A, Kuroda, Y, Kuramitsu, S, Shibata, T, Inoue, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-08-25
公開日2004-09-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of Putative Minimal Nucleotidyltransferase
To be Published
1WX6
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BU of 1wx6 by Molmil
Solution structure of the SH3 domain of the human cytoplasmic protein NCK2
分子名称: Cytoplasmic protein NCK2
著者Ohnishi, S, Kigawa, T, Tomizawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-20
公開日2005-07-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the SH3 domain of the human cytoplasmic protein NCK2
To be Published
1UFI
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BU of 1ufi by Molmil
Crystal structure of the dimerization domain of human CENP-B
分子名称: Major centromere autoantigen B
著者Tawaramoto, M.S, Kurumizaka, H, Tanaka, Y, Park, S.-Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-30
公開日2004-02-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the human centromere protein B (CENP-B) dimerization domain at 1.65-A resolution
J.Biol.Chem., 278, 2003
1UFW
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Solution structure of RNP domain in Synaptojanin 2
分子名称: Synaptojanin 2
著者He, F, Muto, Y, Ushikoshi, R, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-10
公開日2003-12-10
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of RNP domain in Synaptojanin 2
To be Published
1UDN
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BU of 1udn by Molmil
Crystal structure of the tRNA processing enzyme RNase PH from Aquifex aeolicus
分子名称: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
著者Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-02
公開日2003-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003
1U2F
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BU of 1u2f by Molmil
SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN OF HU2AF65
分子名称: PROTEIN (SPLICING FACTOR U2AF 65 KD SUBUNIT)
著者Ito, T, Muto, Y, Green, M.R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-05-26
公開日1999-08-20
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structures of the first and second RNA-binding domains of human U2 small nuclear ribonucleoprotein particle auxiliary factor (U2AF(65)).
EMBO J., 18, 1999
1UGK
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BU of 1ugk by Molmil
Solution structure of the first C2 domain of synaptotagmin IV from human fetal brain (KIAA1342)
分子名称: Synaptotagmin IV
著者Nagashima, T, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-16
公開日2003-12-16
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the first C2 domain of synaptotagmin IV from human fetal brain (KIAA1342)
To be Published
1UGV
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Solution structure of the SH3 domain of human olygophrein-1 like protein (KIAA0621)
分子名称: Olygophrenin-1 like protein
著者Inoue, K, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nakayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-20
公開日2003-12-20
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the SH3 domain of human olygophrein-1 like protein (KIAA0621)
To be Published
1UDQ
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BU of 1udq by Molmil
Crystal structure of the tRNA processing enzyme RNase PH T125A mutant from Aquifex aeolicus
分子名称: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
著者Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-02
公開日2003-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003
1UFZ
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BU of 1ufz by Molmil
Solution structure of HBS1-like domain in hypothetical protein BAB28515
分子名称: Hypothetical protein BAB28515
著者He, F, Muto, Y, Hayami, N, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-11
公開日2004-08-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of HBS1-like domain in hypothetical protein BAB28515
To be Published
1UG8
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NMR structure of the R3H domain from Poly(A)-specific Ribonuclease
分子名称: Poly(A)-specific Ribonuclease
著者Nagata, T, Muto, Y, Hayami, N, Uda, H, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-15
公開日2004-08-17
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the R3H domain from Poly(A)-specific Ribonuclease
To be Published
1UDO
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BU of 1udo by Molmil
Crystal structure of the tRNA processing enzyme RNase PH R86A mutant from Aquifex aeolicus
分子名称: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
著者Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-02
公開日2003-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003
1UEN
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Solution Structure of The Third Fibronectin III Domain of Human KIAA0343 Protein
分子名称: KIAA0343 protein
著者Miyamoto, K, Kigawa, T, Hayashi, F, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-19
公開日2003-11-19
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of The Third Fibronectin III Domain of Human KIAA0343 Protein
To be Published

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