Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3KII
DownloadVisualize
BU of 3kii by Molmil
AGAO 5-phenoxy-2,3-pentadienylamine complex
分子名称: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase, ...
著者Nguyen, Y.H, Ernberg, K.E, Guss, J.M.
登録日2009-11-02
公開日2010-10-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献AGAO 5-phenoxy-2,3-pentadienylamine complex
To be Published
3KUC
DownloadVisualize
BU of 3kuc by Molmil
Complex of Rap1A(E30D/K31E)GDP with RafRBD(A85K/N71R)
分子名称: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Filchtinski, D, Sharabi, O, Rueppel, A, Vetter, I.R, Herrmann, C, Shifman, J.M.
登録日2009-11-27
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献What makes Ras an efficient molecular switch: a computational, biophysical, and structural study of Ras-GDP interactions with mutants of Raf.
J.Mol.Biol., 399, 2010
3KPC
DownloadVisualize
BU of 3kpc by Molmil
Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, Uncharacterized protein MJ0100
著者Lucas, M, Oyenarte, I, Garcia, I.G, Arribas, E.A, Encinar, J.A, Kortazar, D, Fernandez, J.A, Mato, J.M, Martinez-Chantar, M.L, Martinez-Cruz, L.A.
登録日2009-11-16
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.
J.Mol.Biol., 396, 2010
3KML
DownloadVisualize
BU of 3kml by Molmil
Circular Permutant of the Tobacco Mosaic Virus
分子名称: Coat protein
著者Duderstadt, K.E, Dedeo, M.T, Francis, M.B, Berger, J.M.
登録日2009-11-10
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.011 Å)
主引用文献Nanoscale protein assemblies from a circular permutant of the tobacco mosaic virus.
Nano Lett., 10, 2010
3KNS
DownloadVisualize
BU of 3kns by Molmil
Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 20 mM Zn(II)
分子名称: ACETIC ACID, Beta-lactamase 2, GLYCEROL, ...
著者Medrano Martin, F.J, Gonzalez, J.M, Vila, A.J.
登録日2009-11-12
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Metallo-beta-lactamases withstand low Zn(II) conditions by tuning metal-ligand interactions.
Nat.Chem.Biol., 8, 2012
3L49
DownloadVisualize
BU of 3l49 by Molmil
CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER SUBUNIT FROM Rhodobacter sphaeroides 2.4.1
分子名称: ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit, UNKNOWN LIGAND
著者Patskovsky, Y, Ozyurt, S, Dickey, M, Do, J, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-12-18
公開日2010-01-05
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER FROM Rhodobacter sphaeroides
To be Published
3KTS
DownloadVisualize
BU of 3kts by Molmil
CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN FROM LISTERIA MONOCYTOGENES STR. 4b F2365
分子名称: Glycerol uptake operon antiterminator regulatory protein, UNKNOWN LIGAND
著者Patskovsky, Y, Toro, R, Freeman, J, Do, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-11-25
公開日2009-12-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN FROM LISTERIA MONOCYTOGENES STR. 4b F2365
To be Published
3KPT
DownloadVisualize
BU of 3kpt by Molmil
Crystal structure of BcpA, the major pilin subunit of Bacillus cereus
分子名称: CALCIUM ION, Collagen adhesion protein
著者Poor, C.B, Budzik, J.M, Schneewind, O, He, C.
登録日2009-11-16
公開日2009-11-24
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Intramolecular amide bonds stabilize pili on the surface of bacilli.
Proc.Natl.Acad.Sci.USA, 106, 2009
3L4J
DownloadVisualize
BU of 3l4j by Molmil
Topoisomerase II-DNA cleavage complex, apo
分子名称: 3'-THIO-THYMIDINE-5'-PHOSPHATE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3'), ...
著者Schmidt, B.H, Burgin, A.B, Deweese, J.E, Osheroff, N, Berger, J.M.
登録日2009-12-20
公開日2010-05-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases.
Nature, 465, 2010
3KL2
DownloadVisualize
BU of 3kl2 by Molmil
Crystal structure of a putative isochorismatase from Streptomyces avermitilis
分子名称: Putative isochorismatase, SULFATE ION
著者Bonanno, J.B, Dickey, M, Bain, K.T, Chang, S, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-11-06
公開日2009-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a putative isochorismatase from Streptomyces avermitilis
To be Published
3KPD
DownloadVisualize
BU of 3kpd by Molmil
Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine.
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, Uncharacterized protein MJ0100
著者Lucas, M, Oyenarte, I, Garcia, I.G, Arribas, E.A, Encinar, J.A, Kortazar, D, Fernandez, J.A, Mato, J.M, Martinez-Chantar, M.L, Martinez-Cruz, L.A.
登録日2009-11-16
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.
J.Mol.Biol., 396, 2010
3KNR
DownloadVisualize
BU of 3knr by Molmil
Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 1 mM Zn(II)
分子名称: ACETIC ACID, Beta-lactamase 2, GLYCEROL, ...
著者Medrano Martin, F.J, Gonzalez, J.M, Vila, A.J.
登録日2009-11-12
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Metallo-beta-lactamases withstand low Zn(II) conditions by tuning metal-ligand interactions.
Nat.Chem.Biol., 8, 2012
3KPB
DownloadVisualize
BU of 3kpb by Molmil
Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine.
分子名称: GLYCEROL, S-ADENOSYLMETHIONINE, Uncharacterized protein MJ0100
著者Lucas, M, Oyenarte, I, Garcia, I.G, Arribas, E.A, Encinar, J.A, Kortazar, D, Fernandez, J.A, Mato, J.M, Martinez-Cruz, L.A.
登録日2009-11-16
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.
J.Mol.Biol., 396, 2010
3L4K
DownloadVisualize
BU of 3l4k by Molmil
Topoisomerase II-DNA cleavage complex, metal-bound
分子名称: 3'-THIO-THYMIDINE-5'-PHOSPHATE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3'), ...
著者Schmidt, B.H, Burgin, A.B, Deweese, J.E, Osheroff, N, Berger, J.M.
登録日2009-12-20
公開日2010-05-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases.
Nature, 465, 2010
3KRY
DownloadVisualize
BU of 3kry by Molmil
Crystal structure of MMP-13 in complex with SC-78080
分子名称: 1-(2-methoxyethyl)-N-oxo-4-({4-[4-(trifluoromethoxy)phenoxy]phenyl}sulfonyl)piperidine-4-carboxamide, CALCIUM ION, Collagenase 3, ...
著者Kiefer, J.R, Williams, J.M, Becker, D.P.
登録日2009-11-19
公開日2010-10-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Orally-active MMP-1 sparing alpha-tetrahydropyranyl and alpha-piperidinyl sulfone matrix metalloproteinase (MMP) inhibitors with efficacy in cancer, arthritis, and cardiovascular disease
J.Med.Chem., 53, 2010
3L7D
DownloadVisualize
BU of 3l7d by Molmil
Crystal Structure of Glycogen Phosphorylase DK5 complex
分子名称: 1-(2,3-dideoxy-3-fluoro-beta-D-arabino-hexopyranosyl)-4-[(phenylcarbonyl)amino]pyrimidin-2(1H)-one, Glycogen phosphorylase, muscle form
著者Tsirkone, V.G, Lamprakis, C, Hayes, J.M, Skamnaki, V, Drakou, C, Zographos, S.E, Leonidas, D.D.
登録日2009-12-28
公開日2010-10-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies.
Bioorg.Med.Chem., 18, 2010
3L6D
DownloadVisualize
BU of 3l6d by Molmil
Crystal structure of putative oxidoreductase from Pseudomonas putida KT2440
分子名称: Putative oxidoreductase
著者Malashkevich, V.N, Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-12-23
公開日2010-01-12
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of putative oxidoreductase from Pseudomonas putida KT2440
To be Published
3LX5
DownloadVisualize
BU of 3lx5 by Molmil
Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus
分子名称: 2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one, Ferrous iron uptake transporter protein B, GLYCEROL, ...
著者Ash, M.R, Guilfoyle, A, Maher, M.J, Clarke, R.J, Guss, J.M, Jormakka, M.
登録日2010-02-24
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Potassium-activated GTPase reaction in the G Protein-coupled ferrous iron transporter B.
J.Biol.Chem., 285, 2010
3L7A
DownloadVisualize
BU of 3l7a by Molmil
Crystal Structure of Glycogen Phosphorylase DK2 complex
分子名称: 1-(3-deoxy-3-fluoro-beta-D-glucopyranosyl)-4-[(phenylcarbonyl)amino]pyrimidin-2(1H)-one, Glycogen phosphorylase, muscle form
著者Tsirkone, V.G, Lamprakis, C, Hayes, J.M, Skamnaki, V, Drakou, C, Zographos, S.E, Leonidas, D.D.
登録日2009-12-28
公開日2010-10-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies.
Bioorg.Med.Chem., 18, 2010
3LLW
DownloadVisualize
BU of 3llw by Molmil
Crystal structure of geranyltransferase from helicobacter pylori 26695
分子名称: Geranyltranstransferase (IspA), SULFATE ION
著者Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-01-29
公開日2010-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Geranyltransferase from Helicobacter Pylori
To be Published
3L6E
DownloadVisualize
BU of 3l6e by Molmil
Crystal structure of putative short chain dehydrogenase/reductase family oxidoreductase from Aeromonas hydrophila subsp. hydrophila ATCC 7966
分子名称: Oxidoreductase, short-chain dehydrogenase/reductase family, SULFATE ION
著者Malashkevich, V.N, Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-12-23
公開日2010-02-09
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of putative short chain dehydrogenase/reductase family oxidoreductase from Aeromonas hydrophila subsp. hydrophila ATCC 7966
To be Published
3L7B
DownloadVisualize
BU of 3l7b by Molmil
Crystal Structure of Glycogen Phosphorylase DK3 complex
分子名称: 4-amino-1-(3-deoxy-3-fluoro-beta-D-glucopyranosyl)pyrimidin-2(1H)-one, Glycogen phosphorylase, muscle form
著者Tsirkone, V.G, Lamprakis, C, Hayes, J.M, Skamnaki, V, Drakou, C, Zographos, S.E, Leonidas, D.D.
登録日2009-12-28
公開日2010-10-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies.
Bioorg.Med.Chem., 18, 2010
3LQ7
DownloadVisualize
BU of 3lq7 by Molmil
Crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58
分子名称: Glutathione S-transferase
著者Patskovsky, Y, Toro, R, Gilmore, M, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-02-08
公開日2010-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Glutathione S-Transferase from Agrobacterium Tumefaciens
To be Published
3LCP
DownloadVisualize
BU of 3lcp by Molmil
Crystal structure of the carbohydrate recognition domain of LMAN1 in complex with MCFD2
分子名称: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53
著者Wigren, E, Bourhis, J.M, Kursula, I, Guy, J.E, Lindqvist, Y.
登録日2010-01-11
公開日2010-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the LMAN1-CRD/MCFD2 transport receptor complex provides insight into combined deficiency of factor V and factor VIII.
Febs Lett., 584, 2010
3L79
DownloadVisualize
BU of 3l79 by Molmil
Crystal Structure of Glycogen Phosphorylase DK1 complex
分子名称: 1-(3-deoxy-3-fluoro-beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione, Glycogen phosphorylase, muscle form
著者Tsirkone, V.G, Lamprakis, C, Hayes, J.M, Skamnaki, V, Drakou, C, Zographos, S.E, Leonidas, D.D.
登録日2009-12-28
公開日2010-10-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies.
Bioorg.Med.Chem., 18, 2010

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon