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6R43
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BU of 6r43 by Molmil
Structure of P110 from Mycoplasma Genitalium complexed with 6'-SL
分子名称: Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, PHOSPHATE ION, ...
著者Aparicio, D, Fita, I.
登録日2019-03-21
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Mycoplasma genitalium adhesin P110 binds sialic-acid human receptors.
Nat Commun, 9, 2018
6YRK
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BU of 6yrk by Molmil
P140-P110 complex fitted into the cryo-electron density map of the heterodimer
分子名称: Adhesin P1, Mgp-operon protein 3
著者Scheffer, M.P, Aparicio, D.
登録日2020-04-20
公開日2020-06-24
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure and mechanism of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Nat Commun, 11, 2020
6LKM
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BU of 6lkm by Molmil
Crystal structure of Ribonucleotide reductase R1 subunit, RRM1 in complex with 5-chloro-N-((1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)-4-methyl-3,4-dihydro-2H-benzo[b][1,4]oxazine-8-sulfonamide
分子名称: 5-chloro-N-((1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)-4-methyl-3,4-dihydro-2H-benzo[b][1,4]oxazine-8-sulfonamide, MAGNESIUM ION, Ribonucleoside-diphosphate reductase large subunit, ...
著者Miyahara, S, Chong, K.T, Suzuki, T.
登録日2019-12-19
公開日2020-12-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献TAS1553, a novel small molecule ribonucleotide reductase (RNR) subunit interaction inhibitor, displays remarkable anti-tumor activity
To be published
3VHL
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BU of 3vhl by Molmil
Crystal structure of the DHR-2 domain of DOCK8 in complex with Cdc42 (T17N mutant)
分子名称: Cell division control protein 42 homolog, Dedicator of cytokinesis protein 8, PHOSPHATE ION
著者Hanawa-Suetsugu, K, Kukimoto-Niino, M, Nishizak, T, Terada, T, Shirouzu, M, Fukui, Y, Yokoyama, S.
登録日2011-08-26
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.085 Å)
主引用文献DOCK8 is a Cdc42 activator critical for interstitial dendritic cell migration during immune responses.
Blood, 119, 2012
6S3U
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BU of 6s3u by Molmil
Adhesin P140 from Mycoplasma Genitalium
分子名称: Adhesin P1
著者Fita, I, Aparicio, D.
登録日2019-06-26
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Structure and mechanism of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Nat Commun, 11, 2020
6RUT
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BU of 6rut by Molmil
Mycoplasma Genitalium Heterodimer Nap Complex (P140-P110 globular)
分子名称: Adhesin P1, Mgp-operon protein 3
著者Fita, I, Aparicio, D.
登録日2019-05-29
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure and mechanism of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Nat Commun, 11, 2020
4GJI
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BU of 4gji by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant H101N in complex with L-rhamnopyranose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION, ...
著者Yoshida, H, Kamitori, S.
登録日2012-08-09
公開日2012-12-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
FEBS Open Bio, 3, 2013
6AX6
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BU of 6ax6 by Molmil
The crystal structure of a lysyl hydroxylase from Acanthamoeba polyphaga mimivirus
分子名称: FE (II) ION, IODIDE ION, Procollagen lysyl hydroxylase and glycosyltransferase
著者Guo, H, Tsai, C, Miller, M.D, Alvarado, S, Tainer, J.A, Phillips Jr, G.N, Kurie, J.M.
登録日2017-09-06
公開日2018-02-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.241 Å)
主引用文献Pro-metastatic collagen lysyl hydroxylase dimer assemblies stabilized by Fe2+-binding.
Nat Commun, 9, 2018
4GJJ
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BU of 4gjj by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant H101N in complex with D-allopyranose
分子名称: D-ALLOSE, L-rhamnose isomerase, MANGANESE (II) ION, ...
著者Yoshida, H, Kamitori, S.
登録日2012-08-09
公開日2012-12-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
FEBS Open Bio, 3, 2013
6AX7
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BU of 6ax7 by Molmil
The crystal structure of a lysyl hydroxylase from Acanthamoeba polyphaga mimivirus
分子名称: FE (II) ION, Procollagen lysyl hydroxylase and glycosyltransferase
著者Guo, H, Tsai, C, Miller, M.D, Alvarado, S, Tainer, J.A, Phillips Jr, G.N, Kurie, J.M.
登録日2017-09-06
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Pro-metastatic collagen lysyl hydroxylase dimer assemblies stabilized by Fe2+-binding.
Nat Commun, 9, 2018
5OX7
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BU of 5ox7 by Molmil
Structure of P110 from Mycoplasma genitalium at 2.4A with potassium ion
分子名称: Mgp-operon protein 3, POTASSIUM ION
著者Aparicio, D, Fita, I.
登録日2017-09-06
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mycoplasma genitalium adhesin P110 binds sialic-acid human receptors.
Nat Commun, 9, 2018
3NV3
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BU of 3nv3 by Molmil
Crystal structure of human galectin-9 C-terminal CRD in complex with biantennary oligosaccharide
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV4
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BU of 3nv4 by Molmil
Crystal structure of human galectin-9 C-terminal CRD in complex with Sialyllactose
分子名称: Galectin 9 short isoform variant, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, NICKEL (II) ION
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV2
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BU of 3nv2 by Molmil
Crystal structure of human galectin-9 C-terminal CRD in complex with N-acetyllactosamine
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV1
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BU of 3nv1 by Molmil
Crystal structure of human galectin-9 C-terminal CRD
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
4HL0
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BU of 4hl0 by Molmil
Crystal structure of full-length Toxascaris leonina galectin
分子名称: galectin
著者Jeong, M.S.
登録日2012-10-15
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of full-length Toxascaris leonina galectin with two carbohydrate-recognition domains.
Acta Crystallogr.,Sect.D, 69, 2013
1JQN
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BU of 1jqn by Molmil
Crystal structure of E.coli phosphoenolpyruvate carboxylase in complex with Mn2+ and DCDP
分子名称: 3,3-DICHLORO-2-PHOSPHONOMETHYL-ACRYLIC ACID, ASPARTIC ACID, MANGANESE (II) ION, ...
著者Matsumura, H, Kai, Y.
登録日2001-08-07
公開日2003-01-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of C4 form maize and quaternary complex of E. coli phosphoenolpyruvate carboxylases.
Structure, 10, 2002
1JQO
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BU of 1jqo by Molmil
Crystal structure of C4-form phosphoenolpyruvate carboxylase from maize
分子名称: SULFATE ION, phosphoenolpyruvate carboxylase
著者Matsumura, H, Kai, Y.
登録日2001-08-07
公開日2003-01-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of C4 form maize and quaternary complex of E. coli phosphoenolpyruvate carboxylases.
Structure, 10, 2002
5VEG
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BU of 5veg by Molmil
Structure of a Short-Chain Flavodoxin Associated with a Non-Canonical PDU Bacterial Microcompartment
分子名称: CADMIUM ION, FLAVIN MONONUCLEOTIDE, Flavodoxin, ...
著者Sutter, M, Plegaria, J.S, Kerfeld, C.A.
登録日2017-04-04
公開日2017-10-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural and Functional Characterization of a Short-Chain Flavodoxin Associated with a Noncanonical 1,2-Propanediol Utilization Bacterial Microcompartment.
Biochemistry, 56, 2017
3VKN
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BU of 3vkn by Molmil
Galectin-8 N-terminal domain in free form
分子名称: CHLORIDE ION, Galectin-8
著者Kamitori, S, Yoshida, H.
登録日2011-11-18
公開日2012-09-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3VKL
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BU of 3vkl by Molmil
Protease-resistant mutant form of human Galectin-8 in complex with two lactose molecules
分子名称: 1,2-ETHANEDIOL, Galectin-8, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Kamitori, S, Yoshida, H.
登録日2011-11-18
公開日2012-09-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3VKO
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BU of 3vko by Molmil
Galectin-8 N-terminal domain in complex with sialyllactosamine
分子名称: CHLORIDE ION, Galectin-8, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kamitori, S, Yoshida, H.
登録日2011-11-18
公開日2012-09-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3W8M
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BU of 3w8m by Molmil
Crystal Structure of HasAp with Iron Salophen
分子名称: 2,2'-[1,2-PHENYLENEBIS(NITRILOMETHYLIDYNE)]BIS[PHENOLATO]](2-)-N,N',O,O']-IRON, Heme acquisition protein HasAp
著者Shirataki, C, Shoji, O, Sugimoto, H, Shiro, Y, Watanabe, Y.
登録日2013-03-19
公開日2014-01-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Inhibition of Heme Uptake in Pseudomonas aeruginosa by its Hemophore (HasAp ) Bound to Synthetic Metal Complexes
Angew.Chem.Int.Ed.Engl., 53, 2014
3UMV
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Eukaryotic Class II CPD photolyase structure reveals a basis for improved UV-tolerance in plants
分子名称: 1,2-ETHANEDIOL, Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Arvai, A.S, Hitomi, K, Getzoff, E.D, Tainer, J.A.
登録日2011-11-14
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.705 Å)
主引用文献Eukaryotic Class II Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals Basis for Improved Ultraviolet Tolerance in Plants.
J.Biol.Chem., 287, 2012
3WAH
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BU of 3wah by Molmil
Crystal Structure of HasAp with Iron MesoporphyrinIX
分子名称: Heme acquisition protein HasAp, Mesoheme
著者Shirataki, C, Shoji, O, Sugimoto, H, Shiro, Y, Watanabe, Y.
登録日2013-05-02
公開日2014-01-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Inhibition of Heme Uptake in Pseudomonas aeruginosa by its Hemophore (HasAp ) Bound to Synthetic Metal Complexes
Angew.Chem.Int.Ed.Engl., 53, 2014
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