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2ZP8
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BU of 2zp8 by Molmil
The Nature of the TRAP:Anti-TRAP complex
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
著者Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
登録日2008-07-08
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZCZ
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BU of 2zcz by Molmil
Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP)
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB
著者Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
登録日2007-11-15
公開日2008-04-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
2ZP9
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BU of 2zp9 by Molmil
The Nature of the TRAP:Anti-TRAP complex
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
著者Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
登録日2008-07-08
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZD0
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BU of 2zd0 by Molmil
Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP)
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB
著者Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
登録日2007-11-15
公開日2008-04-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.
Protein Sci., 17, 2008
2E89
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BU of 2e89 by Molmil
Crystal structure of Aquifex aeolicus TilS in a complex with ATP, Magnesium ion, and L-lysine
分子名称: ADENOSINE-5'-TRIPHOSPHATE, LYSINE, MAGNESIUM ION, ...
著者Kuratani, M, Yoshikawa, Y, Takahashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-19
公開日2007-11-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine
To be Published
2LTQ
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BU of 2ltq by Molmil
High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data
分子名称: Disulfide bond formation protein B, Fab fragment heavy chain, Fab fragment light chain, ...
著者Tang, M, Sperling, L.J, Schwieters, C.D, Nesbitt, A.E, Gennis, R.B, Rienstra, C.M.
登録日2012-05-30
公開日2013-02-27
最終更新日2023-06-14
実験手法SOLID-STATE NMR
主引用文献Structure of the Disulfide Bond Generating Membrane Protein DsbB in the Lipid Bilayer.
J.Mol.Biol., 425, 2013
4N48
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BU of 4n48 by Molmil
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 Protein in complex with capped RNA fragment
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, S-ADENOSYLMETHIONINE, ...
著者Smietanski, M, Werener, M, Purta, E, Kaminska, K.H, Stepinski, J, Darzynkiewicz, E, Nowotny, M, Bujnicki, J.M.
登録日2013-10-08
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献Structural analysis of human 2'-O-ribose methyltransferases involved in mRNA cap structure formation.
Nat Commun, 5, 2014
4N49
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Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 Protein in complex with m7GpppG and SAM
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, S-ADENOSYLMETHIONINE, ...
著者Smietanski, M, Werener, M, Purta, E, Kaminska, K.H, Stepinski, J, Darzynkiewicz, E, Nowotny, M, Bujnicki, J.M.
登録日2013-10-08
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of human 2'-O-ribose methyltransferases involved in mRNA cap structure formation.
Nat Commun, 5, 2014
4N4A
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BU of 4n4a by Molmil
Cystal structure of Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
著者Smietanski, M, Werener, M, Purta, E, Kaminska, K.H, Stepinski, J, Darzynkiewicz, E, Nowotny, M, Bujnicki, J.M.
登録日2013-10-08
公開日2014-01-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural analysis of human 2'-O-ribose methyltransferases involved in mRNA cap structure formation.
Nat Commun, 5, 2014
2LEG
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BU of 2leg by Molmil
Membrane protein complex DsbB-DsbA structure by joint calculations with solid-state NMR and X-ray experimental data
分子名称: Disulfide bond formation protein B, Thiol:disulfide interchange protein DsbA, UBIQUINONE-1, ...
著者Tang, M, Sperling, L.J, Berthold, D.A, Schwieters, C.D, Nesbitt, A.E, Nieuwkoop, A.J, Gennis, R.B, Rienstra, C.M.
登録日2011-06-15
公開日2011-10-26
最終更新日2023-06-14
実験手法SOLID-STATE NMR
主引用文献High-resolution membrane protein structure by joint calculations with solid-state NMR and X-ray experimental data.
J.Biomol.Nmr, 51, 2011
2YY8
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BU of 2yy8 by Molmil
Crystal structure of archaeal tRNA-methylase for position 56 (aTrm56) from Pyrococcus horikoshii, complexed with S-adenosyl-L-methionine
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, UPF0106 protein PH0461
著者Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-03-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystal structure and mutational study of a unique SpoU family archaeal methylase that forms 2'-O-methylcytidine at position 56 of tRNA
J.Mol.Biol., 375, 2008
7ED9
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BU of 7ed9 by Molmil
Crystal structure of selenomethionine-labeled Thermus thermophilus FakA ATP-binding domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable kinase
著者Nakatani, M, Nakahara, S, Fukui, K, Murakawa, T, Masui, R.
登録日2021-03-15
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01764154 Å)
主引用文献Crystal structure of a nucleotide-binding domain of fatty acid kinase FakA from Thermus thermophilus HB8.
J.Struct.Biol., 214, 2022
7ED6
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BU of 7ed6 by Molmil
Crystal structure of Thermus thermophilus FakA ATP-binding domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable kinase
著者Nakatani, M, Nakahara, S, Fukui, K, Murakawa, T, Masui, R.
登録日2021-03-15
公開日2022-03-16
最終更新日2023-01-11
実験手法X-RAY DIFFRACTION (1.92850327 Å)
主引用文献Crystal structure of a nucleotide-binding domain of fatty acid kinase FakA from Thermus thermophilus HB8.
J.Struct.Biol., 214, 2022
2D39
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BU of 2d39 by Molmil
Trivalent Recognition Unit of Innate Immunity System; Crystal Structure of human M-ficolin Fibrinogen-like Domain
分子名称: CALCIUM ION, Ficolin-1
著者Tanio, M, Kondo, S, Sugio, S, Kohno, T.
登録日2005-09-26
公開日2006-12-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Trivalent recognition unit of innate immunity system; crystal structure of trimeric human m-ficolin fibrinogen-like domain
J.Biol.Chem., 282, 2007
5B5S
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BU of 5b5s by Molmil
Crystal structure of a carbohydrate esterase family 3 from Talaromyces cellulolyticus
分子名称: Acetic acid, CALCIUM ION, GLYCEROL, ...
著者Watanabe, M, Ishikawa, K.
登録日2016-05-16
公開日2016-11-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of an acetylesterase from Talaromyces cellulolyticus and the importance of a disulfide bond near the active site
Febs Lett., 589, 2015
4EBW
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BU of 4ebw by Molmil
Structure of Focal Adhesion Kinase catalytic domain in complex with novel allosteric inhibitor
分子名称: 1-ethyl-8-(4-ethylphenyl)-5-methyl-1,5-dihydropyrazolo[4,3-c][2,1]benzothiazine 4,4-dioxide, Focal adhesion kinase 1
著者Iwatani, M, Iwata, H, Okabe, A, Skene, R.J, Tomita, N, Hayashi, Y, Aramaki, Y, Hosfield, D.J, Hori, A, Baba, A, Miki, H.
登録日2012-03-25
公開日2012-07-25
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery and characterization of novel allosteric FAK inhibitors.
Eur.J.Med.Chem., 61, 2013
2Z23
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BU of 2z23 by Molmil
Crystal structure of Y.pestis oligo peptide binding protein OppA with tri-lysine ligand
分子名称: Periplasmic oligopeptide-binding protein, peptide (LYS)(LYS)(LYS)
著者Tanabe, M, Bertland, T, Mirza, O, Byrne, B, Brown, K.A.
登録日2007-05-17
公開日2007-10-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains.
Acta Crystallogr.,Sect.D, 63, 2007
2Z22
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BU of 2z22 by Molmil
Crystal structure of phosphate preplasmic binding protein psts from yersinia pestis
分子名称: PHOSPHATE ION, Periplasmic phosphate-binding protein
著者Tanabe, M, Byrne, B, Brown, K.A, Mirza, O, Bertland, T.
登録日2007-05-17
公開日2007-10-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains.
Acta Crystallogr.,Sect.D, 63, 2007
3A2S
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BU of 3a2s by Molmil
Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with sucrose
分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Outer membrane protein II, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Tanabe, M, Iverson, T.M.
登録日2009-06-04
公開日2010-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
3AJE
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BU of 3aje by Molmil
Crystal structure of S. tokodaii Sua5 complexed with L-threonine and AMPPNP
分子名称: NITRATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Putative uncharacterized protein ST1526, ...
著者Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-01
公開日2011-04-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Sulfolobus tokodaii Sua5 complexed with L-threonine and AMPPNP
Proteins, 79, 2011
3VZT
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BU of 3vzt by Molmil
Crystal Structure of outer membrane protein PorB from Neisseria meningitidis
分子名称: CESIUM ION, outer membrane protein
著者Tanabe, M, Iverson, T.M.
登録日2012-10-15
公開日2012-11-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
3VZW
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Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with galactose
分子名称: CESIUM ION, beta-D-galactopyranose, outer membrane proteins
著者Tanabe, M, Iverson, T.M.
登録日2012-10-17
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
3VZU
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Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with AMP-PNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, outer membrane protein
著者Tanabe, M, Iverson, T.M.
登録日2012-10-15
公開日2013-03-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.
Proc.Natl.Acad.Sci.USA, 107, 2010
6L0V
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Structure of RLD2 BRX domain bound to LZY3 CCL motif
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NGR2, ...
著者Hirano, Y, Futrutani, M, Nishimura, T, Taniguchi, M, Morita, M.T, Hakoshima, T.
登録日2019-09-27
公開日2020-02-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.347 Å)
主引用文献Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control.
Nat Commun, 11, 2020
6L0W
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Structure of RLD2 BRX domain bound to LZY3 CCL motif
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, NGR2, ...
著者Hirano, Y, Futrutani, M, Nishimura, T, Taniguchi, M, Morita, M.T, Hakoshima, T.
登録日2019-09-27
公開日2020-02-05
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control.
Nat Commun, 11, 2020

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