Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1T5X
DownloadVisualize
BU of 1t5x by Molmil
HLA-DR1 in complex with a synthetic peptide (AAYSDQATPLLLSPR) and the superantigen SEC3-3B2
分子名称: 15-mer peptide fragment of Regulatory protein MIG1, Enterotoxin type C-3, HLA class II histocompatibility antigen, ...
著者Zavala-Ruiz, Z, Strug, I, Anderson, M.W, Gorski, J, Stern, L.J.
登録日2004-05-05
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Polymorphic Pocket at the P10 Position Contributes to Peptide Binding Specificity in Class II MHC Proteins
Chem.Biol., 11, 2004
1SJH
DownloadVisualize
BU of 1sjh by Molmil
HLA-DR1 complexed with a 13 residue HIV capsid peptide
分子名称: Enterotoxin type C-3, GAG polyprotein, HLA class II histocompatibility antigen, ...
著者Zavala-Ruiz, Z, Strug, I, Walker, B.D, Norris, P.J, Stern, L.J.
登録日2004-03-03
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A hairpin turn in a class II MHC-bound peptide orients residues outside the binding groove for T cell recognition.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1T5W
DownloadVisualize
BU of 1t5w by Molmil
HLA-DR1 in complex with a synthetic peptide (AAYSDQATPLLLSPR)
分子名称: 15-mer peptide fragment of Regulatory protein MIG1, HLA class II histocompatibility antigen, DR alpha chain, ...
著者Zavala-Ruiz, Z, Strug, I, Anderson, M.W, Gorski, J, Stern, L.J.
登録日2004-05-05
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Polymorphic Pocket at the P10 Position Contributes to Peptide Binding Specificity in Class II MHC Proteins
Chem.Biol., 11, 2004
4I0P
DownloadVisualize
BU of 4i0p by Molmil
HLA-DO in complex with HLA-DM
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, GLYCEROL, ...
著者Guce, A.I, Mortimer, S.E, Stern, L.J.
登録日2012-11-18
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献HLA-DO acts as a substrate mimic to inhibit HLA-DM by a competitive mechanism.
Nat.Struct.Mol.Biol., 20, 2013
3IK5
DownloadVisualize
BU of 3ik5 by Molmil
SIVmac239 Nef in complex with TCR zeta ITAM 1 polypeptide (A63-R80)
分子名称: Protein Nef, T-cell surface glycoprotein CD3 zeta chain
著者Kim, W.M, Sigalov, A.B, Stern, L.J.
登録日2009-08-05
公開日2010-02-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
Acta Crystallogr.,Sect.D, 66, 2010
3IOZ
DownloadVisualize
BU of 3ioz by Molmil
SIVmac239 Nef in complex with a TCR zeta polypeptide DP1 (L51-D93)
分子名称: Protein Nef, T-cell surface glycoprotein CD3 zeta chain
著者Kim, W.M, Sigalov, A.B, Stern, L.J.
登録日2009-08-15
公開日2010-02-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.699 Å)
主引用文献Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
Acta Crystallogr.,Sect.D, 66, 2010
3TIE
DownloadVisualize
BU of 3tie by Molmil
Crystal structure of the vaccinia derived peptide A11R in complex with the murine MHC CLASS I H-2 KB
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-B alpha chain, ...
著者Nguyen, T.T, Shen, Z.T, Stern, L.J.
登録日2011-08-20
公開日2012-08-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Disparate epitopes mediating protective heterologous immunity to unrelated viruses share peptide-MHC structural features recognized by cross-reactive T cells.
J.Immunol., 191, 2013
7KEI
DownloadVisualize
BU of 7kei by Molmil
DQA1*01:02/DQB1*06:02 in complex with a hemagglutinin peptide from the H1N1 pandemic flu virus.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HA peptide from 2009 H1N1 pandemic flu virus., ...
著者Birtley, J.R, Stern, L.J, Mellins, E.D, Jiang, W.
登録日2020-10-10
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of DQA1*01:02/DQB1*06:02 in complex with a flu peptide.
To Be Published
3TID
DownloadVisualize
BU of 3tid by Molmil
Crystal structure of the LCMV derived peptide GP34 in complex with the murine mhc class I H-2 Kb
分子名称: ACETATE ION, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
著者Nguyen, T.T, Shen, Z.T, Stern, L.J.
登録日2011-08-20
公開日2012-08-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Disparate epitopes mediating protective heterologous immunity to unrelated viruses share peptide-MHC structural features recognized by cross-reactive T cells.
J.Immunol., 191, 2013
3QXD
DownloadVisualize
BU of 3qxd by Molmil
F54C HLA-DR1 bound with CLIP peptide
分子名称: HLA class II histocompatibility antigen gamma chain peptide, HLA class II histocompatibility antigen, DR alpha chain, ...
著者Painter, C.A, Stern, L.J.
登録日2011-03-01
公開日2011-11-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Conformational lability in the class II MHC 310 helix and adjacent extended strand dictate HLA-DM susceptibility and peptide exchange.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QXA
DownloadVisualize
BU of 3qxa by Molmil
HLA-DR1 bound with CLIP peptide
分子名称: HLA class II histocompatibility antigen gamma chain peptide, HLA class II histocompatibility antigen, DR alpha chain, ...
著者Painter, C.A, Stern, L.J.
登録日2011-03-01
公開日2011-11-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.712 Å)
主引用文献Conformational lability in the class II MHC 310 helix and adjacent extended strand dictate HLA-DM susceptibility and peptide exchange.
Proc.Natl.Acad.Sci.USA, 108, 2011
3RDT
DownloadVisualize
BU of 3rdt by Molmil
Crystal Structure of 809.B5 TCR complexed with MHC Class II I-Ab/3k peptide
分子名称: 3K peptide, linker and MHC H-2 class II I-Ab beta chain, H-2 class II histocompatibility antigen, ...
著者Trenh, P, Huseby, E.S, Stern, L.J.
登録日2011-04-01
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A role for differential variable gene pairing in creating T cell receptors specific for unique major histocompatibility ligands.
Immunity, 35, 2011
4P23
DownloadVisualize
BU of 4p23 by Molmil
J809.B5 TCR bound to IAb/3K
分子名称: 3K peptide and MHC IAb beta chain,H-2 class II histocompatibility antigen, A beta chain, H-2 class II histocompatibility antigen, ...
著者Stadinski, B.D, Huseby, E.S, Trenh, P, Stern, L.
登録日2014-02-28
公開日2014-05-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Effect of CDR3 Sequences and Distal V Gene Residues in Regulating TCR-MHC Contacts and Ligand Specificity.
J Immunol., 192, 2014
8CGP
DownloadVisualize
BU of 8cgp by Molmil
Insulin regulated aminopeptidase (IRAP) in complex with an allosteric aryl sulfonamide inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mpakali, A, Stratikos, E, Giastas, P.
登録日2023-02-06
公開日2024-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Mechanisms of Allosteric Inhibition of Insulin-Regulated Aminopeptidase.
J.Mol.Biol., 436, 2024
8CGW
DownloadVisualize
BU of 8cgw by Molmil
Insulin-regulated aminopeptidase (IRAP) in complex with an allosteric benzopyran-based inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mpakali, A, Stratikos, E, Giastas, P.
登録日2023-02-06
公開日2024-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Mechanisms of Allosteric Inhibition of Insulin-Regulated Aminopeptidase.
J.Mol.Biol., 436, 2024
6YDX
DownloadVisualize
BU of 6ydx by Molmil
Insulin-regulated aminopeptidase complexed with a macrocyclic peptidic inhibitor
分子名称: 1,2-ETHANEDIOL, 2-[2-[[[(4~{R},8~{S},11~{S})-11-azanyl-8-[(4-hydroxyphenyl)methyl]-6,10-bis(oxidanylidene)-1,2-dithia-5,9-diazacyclotridec-4-yl]carbonylamino]methyl]phenyl]ethanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mpakali, A, Saridakis, E, Giastas, P, Stratikos, E.
登録日2020-03-21
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis of Inhibition of Insulin-Regulated Aminopeptidase by a Macrocyclic Peptidic Inhibitor.
Acs Med.Chem.Lett., 11, 2020
6MKD
DownloadVisualize
BU of 6mkd by Molmil
4699 TCR bound to I-Ab Padi4
分子名称: 4699 TCR alpha chain, 4699 TCR beta chain, H-2 class II histocompatibility antigen, ...
著者Stadinski, B.D, Blevins, S.J, Huseby, E.S.
登録日2018-09-25
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A temporal thymic selection switch and ligand binding kinetics constrain neonatal Foxp3+Tregcell development.
Nat.Immunol., 20, 2019
6MNO
DownloadVisualize
BU of 6mno by Molmil
6235 TCR bound to I-Ab Padi4
分子名称: 6235 TCR alpha chain, 6235 TCR beta chain, H-2 class II histocompatibility antigen, ...
著者Stadinski, B.D, Blevins, S.J, Huseby, E.S.
登録日2018-10-02
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A temporal thymic selection switch and ligand binding kinetics constrain neonatal Foxp3+Tregcell development.
Nat.Immunol., 20, 2019
6MKR
DownloadVisualize
BU of 6mkr by Molmil
5287 TCR bound to IAb Padi4
分子名称: 5287 TCR alpha chain, 5287 TCR beta chain, H-2 class II histocompatibility antigen, ...
著者Stadinski, B.D, Blevins, S.J, Huseby, E.S.
登録日2018-09-26
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.355 Å)
主引用文献A temporal thymic selection switch and ligand binding kinetics constrain neonatal Foxp3+Tregcell development.
Nat.Immunol., 20, 2019
6MNN
DownloadVisualize
BU of 6mnn by Molmil
6236 TCR bound to I-Ab Padi4
分子名称: 6236 TCR alpha chain, 6236 TCR beta chain, H-2 class II histocompatibility antigen, ...
著者Blevins, S.J, Stadinski, B.D, Huseby, E.S.
登録日2018-10-02
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献A temporal thymic selection switch and ligand binding kinetics constrain neonatal Foxp3+Tregcell development.
Nat.Immunol., 20, 2019
6MNM
DownloadVisualize
BU of 6mnm by Molmil
6256 TCR bound to I-Ab Padi4
分子名称: 6256 TCR alpha chain, 6256 TCR beta chain, H-2 class II histocompatibility antigen, ...
著者Blevins, S.J, Stadinski, B.D, Huseby, E.S.
登録日2018-10-02
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A temporal thymic selection switch and ligand binding kinetics constrain neonatal Foxp3+Tregcell development.
Nat.Immunol., 20, 2019
6MNG
DownloadVisualize
BU of 6mng by Molmil
4738 TCR bound to IAb Padi4
分子名称: 4738 TCR alpha chain, 4738 TCR beta chain, H-2 class II histocompatibility antigen, ...
著者Blevins, S.J, Stadinski, B.D, Huseby, E.S.
登録日2018-10-01
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.662 Å)
主引用文献A temporal thymic selection switch and ligand binding kinetics constrain neonatal Foxp3+Tregcell development.
Nat.Immunol., 20, 2019
2Q6W
DownloadVisualize
BU of 2q6w by Molmil
The structure of HLA-DRA, DRB3*0101 (DR52a) with bound platelet integrin peptide associated with fetal and neonatal alloimmune thrombocytopenia
分子名称: HLA class II histocompatibility antigen, DR alpha chain, DRB3-1 beta chain, ...
著者Parry, C.S.
登録日2007-06-05
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystallographic Structure of the Human Leukocyte Antigen DRA, DRB3*0101: Models of a Directional Alloimmune Response and Autoimmunity
J.Mol.Biol., 371, 2007
1ESF
DownloadVisualize
BU of 1esf by Molmil
STAPHYLOCOCCAL ENTEROTOXIN A
分子名称: CADMIUM ION, STAPHYLOCOCCAL ENTEROTOXIN A
著者Schad, E.M, Svensson, L.A.
登録日1995-05-25
公開日1996-07-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the superantigen staphylococcal enterotoxin type A.
EMBO J., 14, 1995
4GKZ
DownloadVisualize
BU of 4gkz by Molmil
HA1.7, a MHC class II restricted TCR specific for haemagglutinin
分子名称: 1,2-ETHANEDIOL, Alpha chain of Class II TCR, Beta Chain of Class II TCR, ...
著者Holland, C.J, Rizkallah, P.J, Cole, D.K, Sewell, A.K, Godkin, A.J.
登録日2012-08-13
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Minimal conformational plasticity enables TCR cross-reactivity to different MHC class II heterodimers.
Sci Rep, 2, 2012
<12

 

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon