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5LDY
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BU of 5ldy by Molmil
Structure of Yersinia pseudotuberculosis InvD
分子名称: Ig domain protein group 1 domain protein, PHOSPHATE ION
著者Sadana, P, Scrima, A.
登録日2016-06-28
公開日2017-06-14
最終更新日2020-06-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The invasin D protein from Yersinia pseudotuberculosis selectively binds the Fab region of host antibodies and affects colonization of the intestine
J.Biol.Chem., 2018
2HF9
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BU of 2hf9 by Molmil
Crystal structure of HypB from Methanocaldococcus jannaschii in the triphosphate form
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Probable hydrogenase nickel incorporation protein hypB, ...
著者Gasper, R, Scrima, A, Wittinghofer, A.
登録日2006-06-23
公開日2006-07-04
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into HypB, a GTP-binding protein that regulates metal binding.
J.Biol.Chem., 281, 2006
2HF8
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BU of 2hf8 by Molmil
Crystal structure of HypB from Methanocaldococcus jannaschii in the triphosphate form, in complex with zinc
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Probable hydrogenase nickel incorporation protein hypB, ...
著者Gasper, R, Scrima, A, Wittinghofer, A.
登録日2006-06-23
公開日2006-07-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into HypB, a GTP-binding protein that regulates metal binding.
J.Biol.Chem., 281, 2006
2NTY
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BU of 2nty by Molmil
Rop4-GDP-PRONE8
分子名称: Emb|CAB41934.1, GUANOSINE-5'-DIPHOSPHATE, Rac-like GTP-binding protein ARAC5
著者Thomas, C, Fricke, I, Scrima, A, Berken, A, Wittinghofer, A.
登録日2006-11-08
公開日2007-01-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Evidence for a Common Intermediate in Small G Protein-GEF Reactions
Mol.Cell, 25, 2007
2NTX
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BU of 2ntx by Molmil
Prone8
分子名称: Emb|CAB41934.1
著者Thomas, C, Fricke, I, Scrima, A, Berken, A, Wittinghofer, A.
登録日2006-11-08
公開日2007-01-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Evidence for a Common Intermediate in Small G Protein-GEF Reactions
Mol.Cell, 25, 2007
5NPV
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BU of 5npv by Molmil
Structure of human ATG5-ATG16L1(ATG5BD) complex (I4)
分子名称: Autophagy protein 5, Autophagy-related protein 16-1
著者Archna, A, Scrima, A.
登録日2017-04-19
公開日2017-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Identification, biochemical characterization and crystallization of the central region of human ATG16L1.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5NPW
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BU of 5npw by Molmil
Structure of human ATG5-ATG16L1(ATG5BD) complex (C2)
分子名称: Autophagy protein 5, Autophagy-related protein 16-1
著者Archna, A, Scrima, A.
登録日2017-04-19
公開日2017-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Identification, biochemical characterization and crystallization of the central region of human ATG16L1.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5OJY
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BU of 5ojy by Molmil
Co-complex structure of regulator protein 2 (PamR2) with pamamycin 607 from Streptomyces alboniger
分子名称: CITRIC ACID, GLYCEROL, Pamamycin 607, ...
著者Schmelz, S, Rebets, Y, Luzhetskyy, A, Scrima, A.
登録日2017-07-24
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Design, development and application of whole-cell based antibiotic-specific biosensor.
Metab. Eng., 47, 2018
5OJX
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Crystal structure of regulator protein 2 (PamR2) from the pamamycin biosynthetic gene cluster of Streptomyces alboniger
分子名称: TetR family transcription regulator
著者Schmelz, S, Rebets, Y, Luzhetskyy, A, Scrima, A.
登録日2017-07-24
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design, development and application of whole-cell based antibiotic-specific biosensor.
Metab. Eng., 47, 2018
3CP8
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BU of 3cp8 by Molmil
Crystal structure of GidA from Chlorobium tepidum
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA
著者Meyer, S, Scrima, A, Versees, W, Wittinghofer, A.
登録日2008-03-31
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structures of the conserved tRNA-modifying enzyme GidA: implications for its interaction with MnmE and substrate
J.Mol.Biol., 380, 2008
5NUV
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BU of 5nuv by Molmil
Structure of the WD40-domain of human ATG16L1
分子名称: (R,R)-2,3-BUTANEDIOL, Autophagy-related protein 16-1
著者Bajagic, M, Scrima, A.
登録日2017-05-02
公開日2017-07-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of the WD40-domain of human ATG16L1.
Protein Sci., 26, 2017
5NTB
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BU of 5ntb by Molmil
Streptomyces papain inhibitor (SPI)
分子名称: Papain inhibitor, SULFATE ION
著者Schmelz, S, Juettner, N.E, Fuchsbauer, H.L, Scrima, A.
登録日2017-04-27
公開日2018-03-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Illuminating structure and acyl donor sites of a physiological transglutaminase substrate from Streptomyces mobaraensis.
Protein Sci., 27, 2018
5N40
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BU of 5n40 by Molmil
Structure of Yersinia pseudotuberculosis adhesin InvE
分子名称: DI(HYDROXYETHYL)ETHER, Putative invasin
著者Sadana, P, Scrima, A.
登録日2017-02-09
公開日2017-04-12
最終更新日2017-06-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the Y. pseudotuberculosis adhesin InvasinE.
Protein Sci., 26, 2017
4A11
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BU of 4a11 by Molmil
Structure of the hsDDB1-hsCSA complex
分子名称: DNA DAMAGE-BINDING PROTEIN 1, DNA EXCISION REPAIR PROTEIN ERCC-8
著者Bohm, K, Scrima, A, Fischer, E.S, Gut, H, Thomae, N.H.
登録日2011-09-13
公開日2011-12-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation.
Cell(Cambridge,Mass.), 147, 2011
4BJ6
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BU of 4bj6 by Molmil
Crystal structure Rif2 in complex with the C-terminal domain of Rap1 (Rap1-RCT)
分子名称: DNA-BINDING PROTEIN RAP1, RAP1-INTERACTING FACTOR 2, SULFATE ION
著者Shi, T, Bunker, R.D, Gut, H, Scrima, A, Thoma, N.H.
登録日2013-04-16
公開日2013-06-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.26 Å)
主引用文献Rif1 and Rif2 Shape Telomere Funcation and Architecture Through Multivalent RAP1 Interactions
Cell(Cambridge,Mass.), 153, 2013
4BJ5
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BU of 4bj5 by Molmil
Crystal structure of Rif2 in complex with the C-terminal domain of Rap1 (Rap1-RCT)
分子名称: DNA-BINDING PROTEIN RAP1, PROTEIN RIF2, SULFATE ION
著者Shi, T, Bunker, R.D, Gut, H, Scrima, A, Thoma, N.H.
登録日2013-04-16
公開日2013-06-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Rif1 and Rif2 Shape Telomere Funcation and Architecture Through Multivalent RAP1 Interactions
Cell(Cambridge,Mass.), 153, 2013
4BJT
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BU of 4bjt by Molmil
Crystal structure of the Rap1 C-terminal domain (Rap1-RCT) in complex with the Rap1 binding module of Rif1 (Rif1-RBM)
分子名称: 1,2-ETHANEDIOL, DNA-BINDING PROTEIN RAP1, TELOMERE LENGTH REGULATOR PROTEIN RIF1
著者Shi, T, Bunker, R.D, Gut, H, Scrima, A, Thoma, N.H.
登録日2013-04-19
公開日2013-06-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Rif1 and Rif2 Shape Telomere Funcation and Architecture Through Multivalent RAP1 Interactions
Cell(Cambridge,Mass.), 153, 2013
4BJS
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BU of 4bjs by Molmil
Crystal structure of the Rif1 C-terminal domain (Rif1-CTD) from Saccharomyces cerevisiae
分子名称: TELOMERE LENGTH REGULATOR PROTEIN RIF1
著者Bunker, R.D, Shi, T, Gut, H, Scrima, A, Thoma, N.H.
登録日2013-04-19
公開日2013-06-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Rif1 and Rif2 Shape Telomere Funcation and Architecture Through Multivalent RAP1 Interactions
Cell(Cambridge,Mass.), 153, 2013
4BJ1
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BU of 4bj1 by Molmil
Crystal structure of Saccharomyces cerevisiae RIF2
分子名称: CHLORIDE ION, PROTEIN RIF2
著者Shi, T, Bunker, R.D, Gut, H, Scrima, A, Thoma, N.H.
登録日2013-04-15
公開日2013-06-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Rif1 and Rif2 Shape Telomere Funcation and Architecture Through Multivalent RAP1 Interactions
Cell(Cambridge,Mass.), 153, 2013
4A0K
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BU of 4a0k by Molmil
STRUCTURE OF DDB1-DDB2-CUL4A-RBX1 BOUND TO A 12 BP ABASIC SITE CONTAINING DNA-DUPLEX
分子名称: 12 BP DNA, 12 BP THF CONTAINING DNA, CULLIN-4A, ...
著者Fischer, E.S, Scrima, A, Gut, H, Thoma, N.H.
登録日2011-09-09
公開日2011-12-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (5.93 Å)
主引用文献The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation.
Cell(Cambridge,Mass.), 147, 2011
4A0L
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BU of 4a0l by Molmil
Structure of DDB1-DDB2-CUL4B-RBX1 bound to a 12 bp abasic site containing DNA-duplex
分子名称: 12 BP DNA DUPLEX, 12 BP THF CONTAINING DNA DUPLEX, CULLIN-4B, ...
著者Fischer, E.S, Scrima, A, Gut, H, Thoma, N.H.
登録日2011-09-09
公開日2011-12-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (7.4 Å)
主引用文献The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation.
Cell(Cambridge,Mass.), 147, 2011
7NBW
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BU of 7nbw by Molmil
Crystal structure of PqsR (MvfR) ligand-binding domain in complex with a pyridin agonist
分子名称: Transcriptional regulator MvfR, ~{N}-[3-(4-fluorophenyl)prop-2-ynyl]-2-(trifluoromethyl)pyridin-4-amine
著者Schmelz, S, Blankenfeldt, W.
登録日2021-01-28
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Divergent synthesis and biological evaluation of 2-(trifluoromethyl)pyridines as virulence-attenuating inverse agonists targeting PqsR.
Eur.J.Med.Chem., 226, 2021
6YIZ
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Crystal structure of PqsR (MvfR) ligand-binding domain in complex with triazolo-pyridine inverse agonist A
分子名称: 7-oxidanylidene-8-[2-(4-sulfonaphthalen-1-yl)hydrazinyl]-8~{H}-naphthalene-1,3-disulfonic acid, MAGNESIUM ION, Transcriptional regulator MvfR, ...
著者Schmelz, S, Blankenfeldt, W.
登録日2020-04-01
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.163 Å)
主引用文献A New PqsR Inverse Agonist Potentiates Tobramycin Efficacy to Eradicate Pseudomonas aeruginosa Biofilms.
Adv Sci, 8, 2021
8QPY
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Solution NMR structure of the peptidyl carrier domain TomAPCP from the Tomaymycin non-ribosomal peptide synthetase
分子名称: Carrier protein TomAPCP
著者Karanth, M.N, Kirkpatrick, J.P, Carlomagno, T.
登録日2023-10-03
公開日2024-06-26
最終更新日2024-07-03
実験手法SOLUTION NMR
主引用文献The specificity of intermodular recognition in a prototypical nonribosomal peptide synthetase depends on an adaptor domain.
Sci Adv, 10, 2024
8QRX
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Solution NMR structure of the peptidyl carrier domain TomAPCP from the Tomaymycin non-ribosomal peptide synthetase in its substrate-loaded state
分子名称: TomAPCP substrate-loaded from the Tomaymycin non-ribosomal peptide synthetase
著者Karanth, M.N, Kirkpatrick, J.P, Carlomagno, T.
登録日2023-10-09
公開日2024-06-26
最終更新日2024-07-03
実験手法SOLUTION NMR
主引用文献The specificity of intermodular recognition in a prototypical nonribosomal peptide synthetase depends on an adaptor domain.
Sci Adv, 10, 2024

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