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The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor
分子名称:	Erb-B2 INTERACTING PROTEIN, Erb-B2 carboxyl-terminal fragment
著者	Birrane, G, Chung, J, Ladias, J.A.
登録日	2002-08-10
公開日	2003-01-21
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.25 Å)
主引用文献	Novel mode of ligand recognition by the erbin PDZ domain J.Biol.Chem., 278, 2003

1MFL

The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor
分子名称:	Erb-B2 INTERACTING PROTEIN, PHOSPHORYLATED Erb-B2 carboxyl-terminal fragment.
著者	Birrane, G, Chung, J, Ladias, J.A.
登録日	2002-08-12
公開日	2003-01-21
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.88 Å)
主引用文献	Novel mode of ligand recognition by the erbin PDZ domain J.Biol.Chem., 278, 2003

6LFE

Rat-COMT, Nitecapone,SAM and Mg bond
分子名称:	3-(3,4-dihydroxy-5-nitrobenzylidene)pentane-2,4-dione, Catechol O-methyltransferase, DI(HYDROXYETHYL)ETHER, ...
著者	Takebe, K, Iijima, H, Suzuki, M.
登録日	2019-12-02
公開日	2020-03-04
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Crystal Structure of Catechol O-Methyltransferase Complexed with Nitecapone. Chem Pharm Bull (Tokyo), 68, 2020

7YV1

Human K-Ras G12D (GDP-bound) in complex with cyclic peptide inhibitor LUNA18 and KA30L Fab
分子名称:	GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, KA30L Fab H-chain, ...
著者	Irie, M, Fukami, T.A, Matsuo, A, Saka, K, Nishimura, M, Saito, H, Torizawa, T, Tanada, M, Ohta, A.
登録日	2022-08-18
公開日	2023-07-26
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (1.454 Å)
主引用文献	Validation of a New Methodology to Create Oral Drugs beyond the Rule of 5 for Intracellular Tough Targets. J.Am.Chem.Soc., 145, 2023

3AX8

Crystal structure of the human vitamin D receptor ligand binding domain complexed with 15alpha-methoxy-1alpha,25-dihydroxyvitamin D3
分子名称:	(1R,3S,5Z)-5-[(2E)-2-[(1R,3S,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-3-methoxy-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Vitamin D3 receptor
著者	Kakuda, S, Takimoto-Kamimura, M.
登録日	2011-03-30
公開日	2011-10-05
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2.6 Å)
主引用文献	New C15-substituted active vitamin D3 Org.Lett., 13, 2011

3X31

Crystal structure of the human vitamin D receptor ligand binding domain complexed with 7,8-cis-14-epi-1a,25-Dihydroxy-19-norvitamin D3
分子名称:	(1R,3R,7Z,14beta,17alpha)-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9,10-secoestra-5,7-diene-1,3-diol, Vitamin D3 receptor
著者	Kakuda, S, Takimoto-Kamimura, M.
登録日	2015-01-13
公開日	2016-01-13
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (2.11 Å)
主引用文献	Revisiting the 7,8-cis-vitamin D3 derivatives: synthesis, evaluating the biological activity, and study of the binding configuration To be Published

3X36

Crystal structure of the human vitamin D receptor ligand binding domain complexed with 7,8-cis-1a,25-Dihydroxy-19-norvitamin D3
分子名称:	(1R,3R)-5-[(2Z)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]cyclohexane-1,3-diol, Vitamin D3 receptor
著者	Takimoto-Kamimura, M, Kakuda, S.
登録日	2015-01-16
公開日	2016-01-20
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (1.93 Å)
主引用文献	Revisiting the 7,8-cis-vitamin D3 derivatives: synthesis, evaluating the biological activity, and study of the binding configuration To be Published

7Y7D

Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)
分子名称:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者	Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日	2022-06-22
公開日	2023-10-25
最終更新日	2023-12-27
実験手法	ELECTRON MICROSCOPY (2.58 Å)
主引用文献	Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023

7Y7C

Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)
分子名称:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者	Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日	2022-06-22
公開日	2023-10-25
最終更新日	2023-12-27
実験手法	ELECTRON MICROSCOPY (2.51 Å)
主引用文献	Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023

7Y7F

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)
分子名称:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者	Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日	2022-06-22
公開日	2023-10-25
最終更新日	2023-12-27
実験手法	ELECTRON MICROSCOPY (2.43 Å)
主引用文献	Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023

7Y7E

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
分子名称:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者	Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日	2022-06-22
公開日	2023-10-25
最終更新日	2023-12-27
実験手法	ELECTRON MICROSCOPY (2.41 Å)
主引用文献	Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023

7Y7G

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
分子名称:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者	Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日	2022-06-22
公開日	2023-10-25
最終更新日	2023-12-27
実験手法	ELECTRON MICROSCOPY (2.34 Å)
主引用文献	Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023

7Y7H

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)
分子名称:	16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者	Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日	2022-06-22
公開日	2023-10-25
最終更新日	2023-12-27
実験手法	ELECTRON MICROSCOPY (2.51 Å)
主引用文献	Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023

3AUR

Crystal structure of the human vitamin D receptor ligand binding domain complexed with Yne-diene type analog of active 14-epi-2beta-methyl-19-norvitamin D3
分子名称:	(1R,2S,3R)-5-[2-[(1R,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-7a-methyl-1,2,3,3a,6,7-hexahydroinden-4-yl]ethynyl]-2-methyl-cyclohex-4-ene-1,3-diol, Vitamin D3 receptor
著者	Kakuda, S, Takimoto-Kamimura, M.
登録日	2011-02-15
公開日	2011-09-14
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2.21 Å)
主引用文献	Development of 14-epi-19-nortachysterol and its unprecedented binding configuration for the human vitamin D receptor J.Am.Chem.Soc., 133, 2011

3AUQ

Crystal structure of the human vitamin D receptor ligand binding domain complexed with Yne-diene type analog of active 14-epi-2alpha-methyl-19-norvitamin D3
分子名称:	(1R,2S,3R)-5-[2-[(1R,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-7a-methyl-1,2,3,3a,6,7-hexahydroinden-4-yl]ethynyl]-2-methyl-cyclohex-4-ene-1,3-diol, Vitamin D3 receptor
著者	Kakuda, S, Takimoto-Kamimura, M.
登録日	2011-02-15
公開日	2011-09-14
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2.64 Å)
主引用文献	Development of 14-epi-19-nortachysterol and its unprecedented binding configuration for the human vitamin D receptor J.Am.Chem.Soc., 133, 2011

6G11

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikE with the HMA domain of Pikp-1 from rice (Oryza sativa)
分子名称:	AVR-Pik protein, Resistance protein Pikp-1
著者	De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
登録日	2018-03-20
公開日	2018-06-13
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen. Nat Plants, 4, 2018

7B1I

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikF with the HMA domain of OsHIPP19 from rice (Oryza sativa)
分子名称:	AVR-Pik protein, OSIGBa0128P10.9 protein
著者	Maidment, J.H.R, Franceschetti, M, Banfield, M.J.
登録日	2020-11-24
公開日	2021-02-03
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Multiple variants of the fungal effector AVR-Pik bind the HMA domain of the rice protein OsHIPP19, providing a foundation to engineer plant defense. J.Biol.Chem., 296, 2021

6Q76

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-Pia with the HMA domain of Pikp-1 from rice (Oryza sativa)
分子名称:	AVR-Pia protein, Resistance protein Pikp-1
著者	Varden, F.A, Banfield, M.J.
登録日	2018-12-12
公開日	2019-07-10
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Cross-reactivity of a rice NLR immune receptor to distinct effectors from the rice blast pathogenMagnaporthe oryzaeprovides partial disease resistance. J.Biol.Chem., 294, 2019

6FU9

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with the HMA domain of Pikm-1 from rice (Oryza sativa)
分子名称:	AVR-Pik protein, NBS-LRR class disease resistance protein
著者	Franceschetti, M, De la Concepcion, J.C, Banfield, M.J.
登録日	2018-02-26
公開日	2018-06-13
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen. Nat Plants, 4, 2018

6FUD

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikA with the HMA domain of Pikm-1 from rice (Oryza sativa)
分子名称:	AVR-Pik protein, NBS-LRR class disease resistance protein
著者	Franceschetti, M, De la Concepcion, J.C, Banfield, M.J.
登録日	2018-02-26
公開日	2018-06-13
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (1.3 Å)
主引用文献	Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen. Nat Plants, 4, 2018

6G10

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with the HMA domain of Pikp-1 from rice (Oryza sativa)
分子名称:	AVR-Pik protein, CHLORIDE ION, Resistance protein Pikp-1
著者	De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
登録日	2018-03-20
公開日	2018-06-13
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (1.35 Å)
主引用文献	Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen. Nat Plants, 4, 2018

6FUB

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikE with the HMA domain of Pikm-1 from rice (Oryza sativa)
分子名称:	AVR-Pik protein, NBS-LRR class disease resistance protein
著者	Franceschetti, M, De la Concepcion, J.C, Banfield, M.J.
登録日	2018-02-26
公開日	2018-06-13
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (1.3 Å)
主引用文献	Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen. Nat Plants, 4, 2018

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