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3X35
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BU of 3x35 by Molmil
Crystal structure of the reduced form of the solubilized domain of porcine cytochrome b5 in form 2 crystal
分子名称: ACETATE ION, Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE
著者Hirano, Y, Kimura, S, Tamada, T.
登録日2015-01-14
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献High-resolution crystal structures of the solubilized domain of porcine cytochrome b5.
Acta Crystallogr.,Sect.D, 71, 2015
3X33
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BU of 3x33 by Molmil
Crystal structure of the oxidized form of the solubilized domain of porcine cytochrome b5 in form 2 crystal
分子名称: ACETATE ION, Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE
著者Hirano, Y, Kimura, S, Tamada, T.
登録日2015-01-14
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献High-resolution crystal structures of the solubilized domain of porcine cytochrome b5.
Acta Crystallogr.,Sect.D, 71, 2015
3X34
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BU of 3x34 by Molmil
Crystal structure of the reduced form of the solubilized domain of porcine cytochrome b5 in form 1 crystal
分子名称: CALCIUM ION, Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE
著者Hirano, Y, Kimura, S, Tamada, T.
登録日2015-01-14
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.76 Å)
主引用文献High-resolution crystal structures of the solubilized domain of porcine cytochrome b5.
Acta Crystallogr.,Sect.D, 71, 2015
6IQE
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BU of 6iqe by Molmil
Human prohibitin 2
分子名称: Prohibitin-2
著者Hirano, Y, Koshiba, T, Tamada, T.
登録日2018-11-07
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Structural Basis of Mitochondrial Scaffolds by Prohibitin Complexes: Insight into a Role of the Coiled-Coil Region.
Iscience, 19, 2019
5N6O
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BU of 5n6o by Molmil
Wild type human Rac1-GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related C3 botulinum toxin substrate 1
著者Cherfils, J, Ferrandez, Y.
登録日2017-02-15
公開日2017-12-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Allosteric inhibition of the guanine nucleotide exchange factor DOCK5 by a small molecule.
Sci Rep, 7, 2017
6H7E
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BU of 6h7e by Molmil
GEF regulatory domain
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, SULFATE ION, cDNA FLJ56134, ...
著者Ferrandez, Y, Cherfils, J, Peurois, F.
登録日2018-07-31
公開日2020-02-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Membranes prime the RapGEF EPAC1 to transduce cAMP signaling.
Nat Commun, 14, 2023
5Y6T
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BU of 5y6t by Molmil
Crystal structure of endo-1,4-beta-mannanase from Eisenia fetida
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ISOPROPYL ALCOHOL, endo-1,4-beta-mannanase
著者Hirano, Y, Ueda, M, Tamada, T.
登録日2017-08-15
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Gene cloning, expression, and X-ray crystallographic analysis of a beta-mannanase from Eisenia fetida.
Enzyme.Microb.Technol., 117, 2018
6L0V
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BU of 6l0v by Molmil
Structure of RLD2 BRX domain bound to LZY3 CCL motif
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NGR2, ...
著者Hirano, Y, Futrutani, M, Nishimura, T, Taniguchi, M, Morita, M.T, Hakoshima, T.
登録日2019-09-27
公開日2020-02-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.347 Å)
主引用文献Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control.
Nat Commun, 11, 2020
6L0W
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BU of 6l0w by Molmil
Structure of RLD2 BRX domain bound to LZY3 CCL motif
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, NGR2, ...
著者Hirano, Y, Futrutani, M, Nishimura, T, Taniguchi, M, Morita, M.T, Hakoshima, T.
登録日2019-09-27
公開日2020-02-05
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control.
Nat Commun, 11, 2020
5YGE
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BU of 5yge by Molmil
ArgA complexed with AceCoA and glutamate
分子名称: ACETYL COENZYME *A, Amino-acid acetyltransferase, CACODYLIC ACID, ...
著者Yang, X, Wu, L, Ran, Y, Xu, A, Zhang, B, Yang, X, Zhang, R, Rao, Z, Li, J.
登録日2017-09-22
公開日2017-10-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.039 Å)
主引用文献Crystal structure of l-glutamate N-acetyltransferase ArgA from Mycobacterium tuberculosis
Biochim. Biophys. Acta, 1865, 2017
8RIJ
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BU of 8rij by Molmil
Discovery of the first orally bioavailable ADAMTS7 inhibitor BAY-9835
分子名称: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Schafer, M, Meibom, D, Wasnaire, P, Beyer, K, Broehl, A, Cancho-Grande, Y, Elowe, N, Henninger, K, Johannes, S, Jungmann, N, Krainz, T, Lindner, N, Maassen, S, MacDonald, B, Menshykau, D, Mittendorf, J, Sanchez, G, Stefan, E, Torge, A, Xing, Y, Zubov, D.
登録日2023-12-18
公開日2024-02-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献BAY-9835: Discovery of the First Orally Bioavailable ADAMTS7 Inhibitor.
J.Med.Chem., 67, 2024
5W96
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BU of 5w96 by Molmil
Solution structure of phage derived peptide inhibitor of frizzled 7 receptor
分子名称: Fz7 binding peptide
著者Nile, A.H, de Sousa e Melo, F, Mukund, S, Piskol, R, Hansen, S, Zhou, L, Zhang, Y, Fu, Y, Gogol, E.B, Komuves, L.G, Modrusan, Z, Angers, S, Franke, Y, Koth, C, Fairbrother, W.J, Wang, W, de Sauvage, F.J, Hannoush, R.N.
登録日2017-06-22
公開日2018-04-18
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A selective peptide inhibitor of Frizzled 7 receptors disrupts intestinal stem cells.
Nat. Chem. Biol., 14, 2018
3AAC
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BU of 3aac by Molmil
Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form II crystal
分子名称: Putative uncharacterized protein ST1653
著者Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K.
登録日2009-11-13
公開日2010-11-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
1YGJ
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BU of 1ygj by Molmil
Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives
分子名称: (2R)-2-({6-[BENZYL(METHYL)AMINO]-9-ISOPROPYL-9H-PURIN-2-YL}AMINO)BUTAN-1-OL, Pyridoxal kinase
著者Tang, L, Li, M.-H, Cao, P, Wang, F, Chang, W.-R, Bach, S, Reinhardt, J, Ferandin, Y, Koken, M, Galons, H, Wan, Y, Gray, N, Meijer, L, Jiang, T, Liang, D.-C.
登録日2005-01-05
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of pyridoxal kinase in complex with roscovitine and derivatives
J.Biol.Chem., 280, 2005
3AAB
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BU of 3aab by Molmil
Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form I crystal
分子名称: GLYCEROL, ISOPROPYL ALCOHOL, Putative uncharacterized protein ST1653
著者Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K.
登録日2009-11-13
公開日2010-11-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
1YHJ
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BU of 1yhj by Molmil
Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives
分子名称: (2R)-2-{[6-(BENZYLOXY)-9-ISOPROPYL-9H-PURIN-2-YL]AMINO}BUTAN-1-OL, Pyridoxal Kinase
著者Tang, L, Li, M.-H, Cao, P, Wang, F, Chang, W.-R, Bach, S, Reinhardt, J, Ferandin, Y, Koken, M, Galons, H, Wan, Y, Gray, N, Meijer, L, Jiang, T, Liang, D.-C.
登録日2005-01-09
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of pyridoxal kinase in complex with roscovitine and derivatives.
J.Biol.Chem., 280, 2005
5WQQ
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BU of 5wqq by Molmil
High resolution structure of high-potential iron-sulfur protein in the oxidized state
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Ohno, H, Takeda, K, Niwa, S, Tsujinaka, T, Hanazono, Y, Hirano, Y, Miki, K.
登録日2016-11-28
公開日2017-06-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017
3BHV
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BU of 3bhv by Molmil
Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor variolin B
分子名称: 9-amino-5-(2-aminopyrimidin-4-yl)pyrido[3',2':4,5]pyrrolo[1,2-c]pyrimidin-4-ol, Cell division protein kinase 2, Cyclin-A2, ...
著者Echalier, A, Bettayeb, K, Ferandin, Y, Lozach, O, Clement, M, Valette, A, Liger, F, Marquet, B, Morris, J.C, Endicott, J.A, Joseph, B, Meijer, L.
登録日2007-11-29
公開日2008-02-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Meriolins, a new class of cell death inducing kinase inhibitors with enhanced selectivity for cyclin-dependent kinases
Cancer Res., 67, 2007
2Z5C
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BU of 2z5c by Molmil
Crystal Structure of a Novel Chaperone Complex for Yeast 20S Proteasome Assembly
分子名称: Proteasome component PUP2, Protein YPL144W, Uncharacterized protein YLR021W
著者Yashiroda, H, Mizushima, T, Okamoto, K, Kameyama, T, Hayashi, H, Kishimoto, T, Kasahara, M, Kurimoto, E, Sakata, E, Suzuki, A, Hirano, Y, Murata, S, Kato, K, Yamane, T, Tanaka, K.
登録日2007-07-03
公開日2008-01-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
2Z5E
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BU of 2z5e by Molmil
Crystal Structure of Proteasome Assembling Chaperone 3
分子名称: Proteasome Assembling Chaperone 3
著者Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
登録日2007-07-06
公開日2008-02-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
6L46
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BU of 6l46 by Molmil
High-resolution neutron and X-ray joint refined structure of copper-containing nitrite reductase from Geobacillus thermodenitrificans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, COPPER (II) ION, ...
著者Fukuda, Y, Hirano, Y, Kusaka, K, Inoue, T, Tamada, T.
登録日2019-10-16
公開日2020-02-12
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.3 Å), X-RAY DIFFRACTION
主引用文献High-resolution neutron crystallography visualizes an OH-bound resting state of a copper-containing nitrite reductase.
Proc.Natl.Acad.Sci.USA, 117, 2020
1YGK
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BU of 1ygk by Molmil
Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives
分子名称: Pyridoxal kinase, R-ROSCOVITINE
著者Tang, L, Li, M.-H, Cao, P, Wang, F, Chang, W.-R, Bach, S, Reinhardt, J, Ferandin, Y, Koken, M, Galons, H, Wan, Y, Gray, N, Meijer, L, Jiang, T, Liang, D.-C.
登録日2005-01-05
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of pyridoxal kinase in complex with roscovitine and derivatives
J.Biol.Chem., 280, 2005
7MDP
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BU of 7mdp by Molmil
KRas G12C in complex with G-2897
分子名称: 1,2-ETHANEDIOL, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, 4-(trifluoromethyl)-1,3-benzothiazol-2-amine, ...
著者Oh, A, Frank, Y, Wang, W.
登録日2021-04-05
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Conformation-locking antibodies for the discovery and characterization of KRAS inhibitors.
Nat.Biotechnol., 40, 2022
3BHT
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BU of 3bht by Molmil
Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor meriolin 3
分子名称: 4-(4-methoxy-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-2-amine, Cell division protein kinase 2, Cyclin-A2, ...
著者Echalier, A, Bettayeb, K, Ferandin, Y, Lozach, O, Clement, M, Valette, A, Liger, F, Marquet, B, Morris, J.C, Endicott, J.A, Joseph, B, Meijer, L.
登録日2007-11-29
公開日2008-02-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Meriolins, a new class of cell death inducing kinase inhibitors with enhanced selectivity for cyclin-dependent kinases
Cancer Res., 67, 2007
5WQR
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BU of 5wqr by Molmil
High resolution structure of high-potential iron-sulfur protein in the reduced state
分子名称: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
著者Ohno, H, Takeda, K, Niwa, S, Tsujinaka, T, Hanazono, Y, Hirano, Y, Miki, K.
登録日2016-11-28
公開日2017-06-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017

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