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6T3S
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BU of 6t3s by Molmil
Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC Intron Ribozyme, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2019-10-11
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Visualizing group II intron dynamics between the first and second steps of splicing.
Nat Commun, 11, 2020
3ZD7
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BU of 3zd7 by Molmil
Snapshot 3 of RIG-I scanning on RNA duplex
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, ...
著者Luo, D, Pyle, A.M.
登録日2012-11-25
公開日2013-08-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Defining the Functional Determinants for RNA Surveillance by Rig-I.
Embo Rep., 14, 2013
4AY2
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BU of 4ay2 by Molmil
Capturing 5' tri-phosphorylated RNA duplex by RIG-I
分子名称: 5'-R-PPP(GP*GP*CP*GP*CP*GP*GP*CP*UP*UP*CP*GP*GP*CP *CP*GP*CP*GP*CP*C)-3', ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Luo, D, Pyle, A.M.
登録日2012-06-17
公開日2012-10-03
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Visualizing the Determinants of Viral RNA Recognition by Innate Immune Sensor Rig-I.
Structure, 20, 2012
4BPB
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BU of 4bpb by Molmil
STRUCTURAL INSIGHTS INTO RNA RECOGNITION BY RIG-I
分子名称: 5'-R(*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP)-3', PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, SULFATE ION, ...
著者Luo, D, Pyle, A.M.
登録日2013-05-23
公開日2013-06-19
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.584 Å)
主引用文献Structural Insights Into RNA Recognition by Rig-I.
Cell(Cambridge,Mass.), 147, 2011
3ZD6
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BU of 3zd6 by Molmil
Snapshot 1 of RIG-I scanning on RNA duplex
分子名称: PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, RNA DUPLEX, ZINC ION
著者Luo, D, Pyle, A.M.
登録日2012-11-25
公開日2013-08-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Defining the Functional Determinants for RNA Surveillance by Rig-I.
Embo Rep., 14, 2013
5HHK
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BU of 5hhk by Molmil
Reverse transcriptase domain of group II intron maturase from Roseburia intestinalis in P21 space group (Se-MET)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, PHOSPHATE ION, ...
著者Zhao, C, Pyle, A.M.
登録日2016-01-11
公開日2016-05-04
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structures of a group II intron maturase reveal a missing link in spliceosome evolution.
Nat.Struct.Mol.Biol., 23, 2016
5HHJ
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BU of 5hhj by Molmil
Reverse transcriptase domain of group II intron maturase from Roseburia intestinalis in P21 space group
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, PHOSPHATE ION, ...
著者Zhao, C, Pyle, A.M.
登録日2016-01-11
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structures of a group II intron maturase reveal a missing link in spliceosome evolution.
Nat.Struct.Mol.Biol., 23, 2016
5IRG
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BU of 5irg by Molmil
Reverse transcriptase domain of group II intron maturase from Roseburia intestinalis in P212121 space group
分子名称: POTASSIUM ION, Retron-type reverse transcriptase
著者Zhao, C, Pyle, A.M.
登録日2016-03-13
公開日2016-05-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of a group II intron maturase reveal a missing link in spliceosome evolution.
Nat.Struct.Mol.Biol., 23, 2016
5HHL
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BU of 5hhl by Molmil
Reverse transcriptase domain of group II intron maturase from Eubacterium rectale in P21 space group
分子名称: POTASSIUM ION, Retron-type reverse transcriptase
著者Zhao, C, Pyle, A.M.
登録日2016-01-11
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of a group II intron maturase reveal a missing link in spliceosome evolution.
Nat.Struct.Mol.Biol., 23, 2016
5IRF
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BU of 5irf by Molmil
Reverse transcriptase domain of group II intron maturase from Roseburia intestinalis in P1 space group
分子名称: POTASSIUM ION, Retron-type reverse transcriptase
著者Zhao, C, Pyle, A.M.
登録日2016-03-13
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of a group II intron maturase reveal a missing link in spliceosome evolution.
Nat.Struct.Mol.Biol., 23, 2016
3BWP
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BU of 3bwp by Molmil
Crystal structure of a self-spliced group II intron
分子名称: Group IIC intron, MAGNESIUM ION, POTASSIUM ION
著者Toor, N, Keating, K.S, Taylor, S.D, Pyle, A.M.
登録日2008-01-10
公開日2008-04-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of a self-spliced group II intron
Science, 320, 2008
3EOG
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BU of 3eog by Molmil
Co-crystallization showing exon recognition by a group II intron
分子名称: 5'-R(*UP*UP*AP*UP*UP*A)-3', Group IIC intron, MAGNESIUM ION, ...
著者Toor, N, Rajashankar, K, Keating, K.S, Pyle, A.M.
登録日2008-09-26
公開日2008-10-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.391 Å)
主引用文献Structural basis for exon recognition by a group II intron.
Nat.Struct.Mol.Biol., 15, 2008
3EOH
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BU of 3eoh by Molmil
Refined group II intron structure
分子名称: 5'-R(*UP*UP*AP*UP*UP*A)-3', Group IIC intron, MAGNESIUM ION, ...
著者Toor, N, Rajashankar, K, Keating, K.S, Pyle, A.M.
登録日2008-09-26
公開日2008-10-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.125 Å)
主引用文献Structural basis for exon recognition by a group II intron.
Nat.Struct.Mol.Biol., 15, 2008
3IGI
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BU of 3igi by Molmil
Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron
分子名称: 5'-R(*CP*GP*CP*UP*CP*UP*AP*CP*UP*CP*UP*AP*U)-3', Group IIC intron, MAGNESIUM ION, ...
著者Toor, N, Keating, K.S, Fedorova, O, Rajashankar, K, Wang, J, Pyle, A.M.
登録日2009-07-27
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.125 Å)
主引用文献Tertiary architecture of the Oceanobacillus iheyensis group II intron.
Rna, 16, 2010
4E8N
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BU of 4e8n by Molmil
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMMONIUM ION, Group IIC intron, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4E8P
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BU of 4e8p by Molmil
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Rb+ and Mg2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4E8K
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BU of 4e8k by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrate
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-R(*CP*G*AP*UP*UP*UP*AP*UP*UP*A)-3', CALCIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4FAX
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BU of 4fax by Molmil
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Na+ and Mg2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-05-22
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4FAR
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BU of 4far by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-05-22
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4FAU
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BU of 4fau by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exon
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-05-22
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4FAQ
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BU of 4faq by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exon
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, Group IIC intron, ...
著者Marcia, M, Pyle, A.M.
登録日2012-05-22
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4FB0
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BU of 4fb0 by Molmil
Structure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-05-22
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4FAW
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BU of 4faw by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-R(*A*UP*UP*UP*AP*UP*UP*A)-3', Group IIC intron, ...
著者Marcia, M, Pyle, A.M.
登録日2012-05-22
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4E8T
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BU of 4e8t by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-R(*AP*UP*UP*UP*AP*UP*UP*A)-3', CALCIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4E8Q
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BU of 4e8q by Molmil
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012

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