5WX3
 
 | | Alkyldiketide-CoA synthase from Evodia rutaecarpa | | 分子名称: | Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION | | 著者 | Matsui, T, Kodama, T, Tadakoshi, T, Morita, H. | | 登録日 | 2017-01-06 | | 公開日 | 2017-04-26 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.801 Å) | | 主引用文献 | 2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
|
|
5WX7
 | | Alkyldiketide-CoA synthase W332G mutant from Evodia rutaecarpa | | 分子名称: | Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION | | 著者 | Matsui, T, Kodama, T, Tadakoshi, T, Morita, H. | | 登録日 | 2017-01-06 | | 公開日 | 2017-04-26 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.904 Å) | | 主引用文献 | 2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
|
|
1UFR
 | | Crystal Structure of TT1027 from Thermus thermophilus HB8 | | 分子名称: | CHLORIDE ION, pyr mRNA-binding attenuation protein | | 著者 | Matsuura, T, Sakai, H, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2003-06-08 | | 公開日 | 2003-12-08 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Crystal Structure of TT1027 from Thermus thermophilus HB8
To be Published
|
|
5ZN7
 | |
1WNV
 | | D136A mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO) | | 分子名称: | Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION | | 著者 | Matsui, T, Unno, M, Ikeda-Saito, M. | | 登録日 | 2004-08-10 | | 公開日 | 2004-11-09 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | | 主引用文献 | Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM
J.Biol.Chem., 280, 2005
|
|
5XWD
 | | Crystal structure of the complex of 059-152-Fv and EGFR-ECD | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Epidermal growth factor receptor, ... | | 著者 | Matsuda, T, Ito, T, Shirouzu, M. | | 登録日 | 2017-06-29 | | 公開日 | 2018-02-28 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.894 Å) | | 主引用文献 | Cell-free synthesis of functional antibody fragments to provide a structural basis for antibody-antigen interaction
PLoS ONE, 13, 2018
|
|
2Z9S
 | | Crystal Structure Analysis of rat HBP23/Peroxiredoxin I, Cys52Ser mutant | | 分子名称: | Peroxiredoxin-1 | | 著者 | Matsumura, T, Okamoto, K, Nishino, T, Abe, Y. | | 登録日 | 2007-09-25 | | 公開日 | 2007-11-20 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | | 主引用文献 | Dimer-Oligomer Interconversion of Wild-type and Mutant Rat 2-Cys Peroxiredoxin: DISULFIDE FORMATION AT DIMER-DIMER INTERFACES IS NOT ESSENTIAL FOR DECAMERIZATION
J.Biol.Chem., 283, 2008
|
|
3ALO
 | | Crystal structure of human non-phosphorylated MKK4 kinase domain ternary complex with AMP-PNP and p38 peptide | | 分子名称: | Dual specificity mitogen-activated protein kinase kinase 4, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | | 著者 | Matsumoto, T, Kinoshita, T, Kirii, Y, Yokota, K, Hamada, K, Tada, T. | | 登録日 | 2010-08-04 | | 公開日 | 2010-10-27 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Crystal structures of MKK4 kinase domain reveal that substrate peptide binds to an allosteric site and induces an auto-inhibition state
Biochem.Biophys.Res.Commun., 400, 2010
|
|
3ALN
 | | Crystal Structure of human non-phosphorylated MKK4 kinase domain complexed with AMP-PNP | | 分子名称: | Dual specificity mitogen-activated protein kinase kinase 4, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | | 著者 | Matsumoto, T, Kinoshita, T, Kirii, Y, Yokota, K, Hamada, K, Tada, T. | | 登録日 | 2010-08-04 | | 公開日 | 2010-10-27 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structures of MKK4 kinase domain reveal that substrate peptide binds to an allosteric site and induces an auto-inhibition state
Biochem.Biophys.Res.Commun., 400, 2010
|
|
5YOT
 | | Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | | 著者 | Matsuzawa, T, Watanabe, M, Nakamichi, Y, Yaoi, K. | | 登録日 | 2017-10-31 | | 公開日 | 2018-11-07 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | | 主引用文献 | Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme.
J.Struct.Biol., 205, 2019
|
|
5ZN6
 | |
2DI2
 | | NMR structure of the HIV-2 nucleocapsid protein | | 分子名称: | Nucleocapsid protein p7, ZINC ION | | 著者 | Matsui, T, Kodera, Y, Endoh, H, Miyauchi, E, Komatsu, H, Sato, K, Tanaka, T, Kohno, T, Maeda, T. | | 登録日 | 2006-03-27 | | 公開日 | 2007-03-13 | | 最終更新日 | 2024-05-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | RNA Recognition Mechanism of the Minimal Active Domain of the Human Immunodeficiency Virus Type-2 Nucleocapsid Protein
J.Biochem.(Tokyo), 141, 2007
|
|
2EC7
 | | Solution Structure of Human Immunodificiency Virus Type-2 Nucleocapsid Protein | | 分子名称: | Gag polyprotein (Pr55Gag), ZINC ION | | 著者 | Matsui, T, Kodera, Y, Tanaka, T, Endoh, H, Tanaka, H, Miyauchi, E, Komatsu, H, Kohno, T, Maeda, T. | | 登録日 | 2007-02-10 | | 公開日 | 2008-02-19 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The RNA recognition mechanism of human immunodeficiency virus (HIV) type 2 NCp8 is different from that of HIV-1 NCp7
Biochemistry, 48, 2009
|
|
2E1X
 | | NMR structure of the HIV-2 nucleocapsid protein | | 分子名称: | Gag-Pol polyprotein (Pr160Gag-Pol), ZINC ION | | 著者 | Matsui, T, Kodera, Y, Miyauchi, E, Tanaka, H, Endoh, H, Komatsu, H, Tanaka, T, Kohno, T, Maeda, T. | | 登録日 | 2006-11-03 | | 公開日 | 2007-06-05 | | 最終更新日 | 2022-03-09 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural role of the secondary active domain of HIV-2 NCp8 in multi-functionality
Biochem.Biophys.Res.Commun., 358, 2007
|
|
7EAP
 | | Crystal structure of IpeA-XXXG complex | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | | 著者 | Matsuzawa, T, Watanabe, M, Nakamichi, Y, Akita, H, Yaoi, K. | | 登録日 | 2021-03-08 | | 公開日 | 2022-03-16 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.42 Å) | | 主引用文献 | Structural basis for the catalytic mechanism of the glycoside hydrolase family 3 isoprimeverose-producing oligoxyloglucan hydrolase from Aspergillus oryzae.
Febs Lett., 596, 2022
|
|
2YVP
 | | Crystal structure of NDX2 in complex with MG2+ and ampcpr from thermus thermophilus HB8 | | 分子名称: | MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE, MutT/nudix family protein | | 著者 | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-04-13 | | 公開日 | 2008-02-26 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.66 Å) | | 主引用文献 | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
|
|
2YVN
 | | Crystal structure of NDX2 from thermus thermophilus HB8 | | 分子名称: | MutT/nudix family protein | | 著者 | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-04-13 | | 公開日 | 2008-02-26 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | | 主引用文献 | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
|
|
2YVM
 | | Crystal structure of NDX2 in complex with MG2+ from thermus thermophilus HB8 | | 分子名称: | MAGNESIUM ION, MutT/nudix family protein | | 著者 | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-04-13 | | 公開日 | 2008-02-26 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
|
|
2ZXO
 | | Crystal structure of RecJ from Thermus thermophilus HB8 | | 分子名称: | Single-stranded DNA specific exonuclease RecJ | | 著者 | Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | | 登録日 | 2009-01-05 | | 公開日 | 2010-01-05 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
|
|
2ZXP
 | | Crystal structure of RecJ in complex with Mn2+ from Thermus thermophilus HB8 | | 分子名称: | MANGANESE (II) ION, Single-stranded DNA specific exonuclease RecJ | | 著者 | Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | | 登録日 | 2009-01-05 | | 公開日 | 2010-01-05 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
|
|
2ZXR
 | | Crystal structure of RecJ in complex with Mg2+ from Thermus thermophilus HB8 | | 分子名称: | MAGNESIUM ION, Single-stranded DNA specific exonuclease RecJ | | 著者 | Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | | 登録日 | 2009-01-05 | | 公開日 | 2010-01-05 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | | 主引用文献 | Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
|
|
3VUT
 | | Crystal structures of non-phosphorylated MAP2K4 | | 分子名称: | Dual specificity mitogen-activated protein kinase kinase 4 | | 著者 | Matsumoto, T, Kinoshita, T, Kirii, Y, Tada, T, Yamano, A. | | 登録日 | 2012-07-05 | | 公開日 | 2012-09-05 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | | 主引用文献 | Crystal and solution structures disclose a putative transient state of mitogen-activated protein kinase kinase 4
Biochem.Biophys.Res.Commun., 425, 2012
|
|
1IQQ
 | | Crystal Structure of Japanese pear S3-RNase | | 分子名称: | S3-RNase, beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | | 著者 | Matsuura, T, Sakai, H, Norioka, S. | | 登録日 | 2001-07-25 | | 公開日 | 2001-11-07 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Crystal structure at 1.5-A resolution of Pyrus pyrifolia pistil ribonuclease responsible for gametophytic self-incompatibility.
J.Biol.Chem., 276, 2001
|
|
3WL2
 | | Monoclinic Lysozyme at 0.96 A resolution | | 分子名称: | 1,2-ETHANEDIOL, Lysozyme C, NITRATE ION, ... | | 著者 | Matsumoto, T, Yamano, A, Hasegawa, T, Maeyama, M. | | 登録日 | 2013-11-06 | | 公開日 | 2014-11-12 | | 実験手法 | X-RAY DIFFRACTION (0.96 Å) | | 主引用文献 | Evaluation of Rigaku XtaLAB P200
To be Published
|
|
3VO9
 | | Staphylococcus aureus FtsZ apo-form (SeMet) | | 分子名称: | Cell division protein FtsZ | | 著者 | Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I. | | 登録日 | 2012-01-20 | | 公開日 | 2012-08-29 | | 最終更新日 | 2013-08-14 | | 実験手法 | X-RAY DIFFRACTION (2.706 Å) | | 主引用文献 | Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
|
|
