Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6C5I
DownloadVisualize
BU of 6c5i by Molmil
Unliganded S25-5 Fab
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Evans, S.V, Haji-Ghassemi, O.
登録日2018-01-16
公開日2019-01-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Subtle Changes in the Combining Site of the Chlamydiaceae-Specific mAb S25-23 Increase the Antibody-Carbohydrate Binding Affinity by an Order of Magnitude.
Biochemistry, 58, 2019
6C5J
DownloadVisualize
BU of 6c5j by Molmil
S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, IgG1 Fab Heavy Chain, ...
著者Haji-Ghassemi, O, Evans, S.V.
登録日2018-01-16
公開日2019-01-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Subtle Changes in the Combining Site of the Chlamydiaceae-Specific mAb S25-23 Increase the Antibody-Carbohydrate Binding Affinity by an Order of Magnitude.
Biochemistry, 58, 2019
4ODW
DownloadVisualize
BU of 4odw by Molmil
Unliganded Fab structure of lipid A-specific antibody A6
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, A6 Fab (IgG2b kappa) light chain, A6 Fab (IgG2b) heavy chain
著者Haji-Ghassemi, O, Evans, S.V.
登録日2014-01-10
公開日2015-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.
J.Biol.Chem., 290, 2015
4ODV
DownloadVisualize
BU of 4odv by Molmil
Fab Structure of lipid A-specific antibody A6 in complex with lipid A carbohydrate backbone
分子名称: 2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, A6 Fab (IgG2b kappa) light chain, A6 Fab (IgG2b) heavy chain, ...
著者Haji-Ghassemi, O, Evans, S.V.
登録日2014-01-10
公開日2015-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.
J.Biol.Chem., 290, 2015
4ODS
DownloadVisualize
BU of 4ods by Molmil
Unliganded Fab structure of lipid A-specific antibody S55-3
分子名称: S55-3 Fab (IgG2b) heavy chain
著者Haji-Ghassemi, O, Evans, S.V.
登録日2014-01-10
公開日2015-07-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.
J.Biol.Chem., 290, 2015
4ODT
DownloadVisualize
BU of 4odt by Molmil
Fab Structure of lipid A-specific antibody S1-15 in complex with lipid A carbohydrate backbone
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, S1-15 Fab (IgG2b kappa) light chain, ...
著者Haji-Ghassemi, O, Evans, S.V.
登録日2014-01-10
公開日2015-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.
J.Biol.Chem., 290, 2015
4ODU
DownloadVisualize
BU of 4odu by Molmil
Unliganded Fab structure of lipid A-specific antibody S1-15
分子名称: S1-15 Fab (IgG2b kappa) light chain, S1-15 Fab (IgG2b) heavy chain, SULFATE ION
著者Haji-Ghassemi, O, Evans, S.V.
登録日2014-01-10
公開日2015-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.
J.Biol.Chem., 290, 2015
3BPC
DownloadVisualize
BU of 3bpc by Molmil
co-crystal structure of S25-2 Fab in complex with 5-deoxy-4-epi-2,3-dehydro Kdo (4.8) Kdo
分子名称: 3,4,5-trideoxy-alpha-D-erythro-oct-3-en-2-ulopyranosonic acid-(2-8)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, Fab, antibody fragment (IgG1k), ...
著者Brooks, C.L, Evans, S.V.
登録日2007-12-18
公開日2009-01-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Exploration of specificity in germline monoclonal antibody recognition of a range of natural and synthetic epitopes.
J.Mol.Biol., 377, 2008
7T0H
DownloadVisualize
BU of 7t0h by Molmil
Crystal structure of S25-39 Fab Unliganded 2
分子名称: BROMIDE ION, S25-39 Fab heavy chain, S25-39 Fab light chain
著者Legg, M.S.G, Blackler, R.J, Evans, S.V.
登録日2021-11-29
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Antigen binding by conformational selection in near-germline antibodies.
J.Biol.Chem., 298, 2022
7T0J
DownloadVisualize
BU of 7t0j by Molmil
Crystal structure of S25-2 Fab Unliganded 3
分子名称: S25-2 Fab heavy chain, S25-2 Fab light chain
著者Legg, M.S.G, Blackler, R.J, Evans, S.V.
登録日2021-11-29
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Antigen binding by conformational selection in near-germline antibodies.
J.Biol.Chem., 298, 2022
7T0I
DownloadVisualize
BU of 7t0i by Molmil
Crystal structure of S25-39 Fab Unliganded 3
分子名称: S25-39 Fab heavy chain, S25-39 Fab light chain
著者Legg, M.S.G, Blackler, R.J, Evans, S.V.
登録日2021-11-29
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Antigen binding by conformational selection in near-germline antibodies.
J.Biol.Chem., 298, 2022
7T0G
DownloadVisualize
BU of 7t0g by Molmil
Crystal structure of S25-39 Fab Unliganded 1
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, S25-39 Fab heavy chain, S25-39 Fab light chain
著者Legg, M.S.G, Blackler, R.J, Evans, S.V.
登録日2021-11-29
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Antigen binding by conformational selection in near-germline antibodies.
J.Biol.Chem., 298, 2022
7T0F
DownloadVisualize
BU of 7t0f by Molmil
Crystal structure of S25-39 Fab in complex with 4-MeO-KdoOAll
分子名称: 3-deoxy-4-O-methyl-alpha-D-manno-oct-2-ulopyranosonic acid, S25-39 Fab heavy chain, S25-39 Fab light chain
著者Legg, M.S.G, Blackler, R.J, Evans, S.V.
登録日2021-11-29
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Antigen binding by conformational selection in near-germline antibodies.
J.Biol.Chem., 298, 2022
7T0K
DownloadVisualize
BU of 7t0k by Molmil
Crystal structure of S25-2 Fab Unliganded 4
分子名称: IODIDE ION, S25-2 Fab heavy chain, S25-2 Fab light chain
著者Legg, M.S.G, Blackler, R.J, Evans, S.V.
登録日2021-11-29
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Antigen binding by conformational selection in near-germline antibodies.
J.Biol.Chem., 298, 2022
3V0W
DownloadVisualize
BU of 3v0w by Molmil
Crystal structure of Fab WN1 222-5 in complex with LPS
分子名称: 2-amino-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-glucopyranose-(1-2)-alpha-D-glucopyranose-(1-3)-[alpha-D-galactopyranose-(1-6)]alpha-D-glucopyranose-(1-3)-[L-glycero-alpha-D-manno-heptopyranose-(1-7)]4-O-phosphono-L-glycero-alpha-D-manno-heptopyranose-(1-3)-4-O-phosphono-L-glycero-alpha-D-manno-heptopyranose-(1-5)-[3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)]3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, SULFATE ION, WN1 222-5 Fab (IgG2a) heavy chain, ...
著者Gomery, K, Evans, S.V.
登録日2011-12-08
公開日2012-12-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Antibody WN1 222-5 mimics Toll-like receptor 4 binding in the recognition of LPS.
Proc.Natl.Acad.Sci.USA, 109, 2012
3V0V
DownloadVisualize
BU of 3v0v by Molmil
Fab WN1 222-5 unliganded
分子名称: WN1 222-5 Fab (IgG2a) heavy chain, WN1 222-5 Fab (IgG2a) light chain
著者Gomery, K, Evans, S.V.
登録日2011-12-08
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Antibody WN1 222-5 mimics Toll-like receptor 4 binding in the recognition of LPS.
Proc.Natl.Acad.Sci.USA, 109, 2012
3OKN
DownloadVisualize
BU of 3okn by Molmil
Crystal structure of S25-39 in complex with Kdo(2.4)Kdo(2.4)Kdo
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain, ...
著者Blackler, R.J, Evans, S.V.
登録日2010-08-25
公開日2011-04-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011
3OKD
DownloadVisualize
BU of 3okd by Molmil
Crystal structure of S25-39 in complex with Kdo
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, DI(HYDROXYETHYL)ETHER, S25-39 Fab (IgG1k) heavy chain, ...
著者Blackler, R.J, Evans, S.V.
登録日2010-08-24
公開日2011-04-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011
3OKL
DownloadVisualize
BU of 3okl by Molmil
Crystal structure of S25-39 in complex with Kdo(2.8)Kdo
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain, ...
著者Blackler, R.J, Evans, S.V.
登録日2010-08-25
公開日2011-04-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011
3OKO
DownloadVisualize
BU of 3oko by Molmil
Crystal structure of S25-39 in complex with Kdo(2.8)Kdo(2.4)Kdo
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain, ...
著者Blackler, R.J, Evans, S.V.
登録日2010-08-25
公開日2011-04-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011
3PHQ
DownloadVisualize
BU of 3phq by Molmil
Crystal structure of S64-4 in complex with KDO
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, S64-4 Fab (IgG1) heavy chain, S64-4 Fab (IgG1) light chain
著者Evans, D.W, Evans, S.V.
登録日2010-11-04
公開日2011-05-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into parallel strategies for germline antibody recognition of lipopolysaccharide from Chlamydia.
Glycobiology, 21, 2011
3PHO
DownloadVisualize
BU of 3pho by Molmil
Crystal structure of S64-4 in complex with PSBP
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose, S64-4 Fab (IgG1) heavy chain, S64-4 Fab (IgG1) light chain
著者Evans, D.W, Evans, S.V.
登録日2010-11-04
公開日2011-05-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into parallel strategies for germline antibody recognition of lipopolysaccharide from Chlamydia.
Glycobiology, 21, 2011
3OKK
DownloadVisualize
BU of 3okk by Molmil
Crystal structure of S25-39 in complex with Kdo(2.4)Kdo
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain, ...
著者Blackler, R.J, Evans, S.V.
登録日2010-08-25
公開日2011-04-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011
3IJY
DownloadVisualize
BU of 3ijy by Molmil
Structure of S67-27 in Complex with Kdo(2.8)Kdo
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, Immunoglobulin heavy chain (IGG3), Immunoglobulin light chain (IGG3), ...
著者Brooks, C.L, Blackler, R.J, Evans, S.V.
登録日2009-08-05
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The role of CDR H3 in antibody recognition of a synthetic analog of a lipopolysaccharide antigen.
Glycobiology, 20, 2010
3OKE
DownloadVisualize
BU of 3oke by Molmil
Crystal structure of S25-39 in complex with Ko
分子名称: S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain, ZINC ION, ...
著者Blackler, R.J, Evans, S.V.
登録日2010-08-24
公開日2011-04-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon