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6M8N
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BU of 6m8n by Molmil
Endo-fucoidan hydrolase P5AFcnA from glycoside hydrolase family 107
分子名称: CALCIUM ION, MALONATE ION, P5AFcnA
著者Boraston, A.B, Vickers, C.J, Abe, K, Salama-Alber, O.
登録日2018-08-22
公開日2018-10-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
7LK7
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BU of 7lk7 by Molmil
Structure of the Exo-alpha-L-galactosidase BpGH29 from Bacteroides plebeius in complex with L-galactose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Exo-alpha-L-galactosidase, ...
著者Boraston, A.B, Robb, C.S.
登録日2021-02-01
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Metabolism of a hybrid algal galactan by members of the human gut microbiome.
Nat.Chem.Biol., 18, 2022
7LNP
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BU of 7lnp by Molmil
Structure of the exo-alpha-L-galactosidase BpGH29 (D264N mutant) from Bacteroides plebeius in complex with paranitrophenyl-alpha-L-galactopyranoside
分子名称: CALCIUM ION, CHLORIDE ION, Exo-alpha-L-galactosidase, ...
著者Boraston, A.B, Robb, C.S.
登録日2021-02-08
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Metabolism of a hybrid algal galactan by members of the human gut microbiome.
Nat.Chem.Biol., 18, 2022
2YLA
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BU of 2yla by Molmil
INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pluvinage, B, Higgins, M.A, Abbott, D.W, Robb, C, Dalia, A.B, Deng, L, Weiser, J.N, Parsons, T.B, Fairbanks, A.J, Vocadlo, D.J, Boraston, A.B.
登録日2011-06-01
公開日2011-09-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Inhibition of the Pneumococcal Virulence Factor Strh and Molecular Insights Into N-Glycan Recognition and Hydrolysis.
Structure, 19, 2011
8DF2
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BU of 8df2 by Molmil
The structure of the 'ALT' construct of the Amuc_1438 glycopeptidase
分子名称: CALCIUM ION, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
8DEK
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BU of 8dek by Molmil
The structure of the glycopeptidase catalytic domain including the linker of Amuc_1438
分子名称: 1,2-ETHANEDIOL, NPCBM/NEW2 domain-containing protein, SODIUM ION, ...
著者Medley, B.J, Boraston, A.B.
登録日2022-06-20
公開日2022-08-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
J.Biol.Chem., 298, 2022
6DMS
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BU of 6dms by Molmil
Endo-fucoidan hydrolase MfFcnA4_H294Q from glycoside hydrolase family 107
分子名称: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION
著者Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
登録日2018-06-05
公開日2018-10-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
6DRR
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BU of 6drr by Molmil
Crystal structure of Cj0485 dehydrogenase
分子名称: 1,2-ETHANEDIOL, Short-chain dehydrogenase
著者Pluvinage, B, Boraston, A.B.
登録日2018-06-12
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
6DS1
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BU of 6ds1 by Molmil
Crystal structure of Cj0485 dehydrogenase in complex with NADP+
分子名称: GLYCEROL, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Pluvinage, B, Boraston, A.B.
登録日2018-06-13
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.119 Å)
主引用文献The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
2XD2
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BU of 2xd2 by Molmil
The crystal structure of MalX from Streptococcus pneumoniae
分子名称: MALTOSE/MALTODEXTRIN-BINDING PROTEIN
著者Abbott, D.W, Higgins, M.A, Hyrnuik, S, Pluvinage, B, Lammerts van Bueren, A, Boraston, A.B.
登録日2010-04-28
公開日2010-06-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Molecular Basis of Glycogen Breakdown and Transport in Streptococcus Pneumoniae.
Mol.Microbiol., 77, 2010
3PE7
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BU of 3pe7 by Molmil
Oligogalacturonate lyase in complex with manganese
分子名称: ACETATE ION, CALCIUM ION, MANGANESE (II) ION, ...
著者Abbott, D.W, Gilbert, H.J, Boraston, A.B.
登録日2010-10-25
公開日2010-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The active site of oligogalacturonate lyase provides unique insights into cytoplasmic oligogalacturonate beta-elimination.
J.Biol.Chem., 285, 2010
4TXW
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BU of 4txw by Molmil
Crystal structure of CBM32-4 from the Clostridium perfringens NagH
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Hyaluronoglucosaminidase
著者Grondin, J.M, Ficko-Blean, E, Boraston, A.B, Smith, S.P.
登録日2014-07-07
公開日2015-12-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Solution Structure and Dynamics of Full-length GH84A, a multimodular B-N-acetylglucosaminidase from Clostridium perfringens
To Be Published
4UAP
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BU of 4uap by Molmil
X-ray structure of GH31 CBM32-2 bound to GalNAc
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, GLYCEROL, ...
著者Grondin, J.M, Abe, K, Boraston, A.B, Smith, S.P.
登録日2014-08-11
公開日2015-10-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
PLoS ONE, 12, 2017
4UTF
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BU of 4utf by Molmil
Structure of the GH99 endo-alpha-mannosidase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-isofagomine and alpha- 1,2-mannobiose
分子名称: 1,2-ETHANEDIOL, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, GLYCOSYL HYDROLASE FAMILY 71, ...
著者Cuskin, F, Lowe, E.C, Temple, M.J, Zhu, Y, Pudlo, N.A, Cameron, E.A, Urs, K, Thompson, A.J, Cartmell, A, Rogowski, A, Tolbert, T, Piens, K, Bracke, D, Vervecken, W, Hakki, Z, Speciale, G, Munoz-Munoz, J.L, Pena, M.J, McLean, R, Suits, M.D, Boraston, A.B, Atherly, T, Ziemer, C.J, Williams, S.J, Davies, G.J, Abbott, D.W, Martens, E.C, Gilbert, H.J.
登録日2014-07-21
公開日2014-12-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Human Gut Bacteroidetes Can Utilize Yeast Mannan Through a Selfish Mechanism.
Nature, 517, 2015
6DLH
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BU of 6dlh by Molmil
Endo-fucoidan hydrolase MfFcnA4 from glycoside hydrolase family 107
分子名称: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION, ...
著者Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
登録日2018-06-01
公開日2018-10-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
6DNS
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BU of 6dns by Molmil
Endo-fucoidan hydrolase MfFcnA9 from glycoside hydrolase family 107
分子名称: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION
著者Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
登録日2018-06-07
公開日2018-10-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
4P5Y
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BU of 4p5y by Molmil
Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, Glycosyl hydrolase, ...
著者Grondin, J.M, Allingham, J.S, Boraston, A.B, Smith, S.P.
登録日2014-03-04
公開日2015-10-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
PLoS ONE, 12, 2017
2O4E
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BU of 2o4e by Molmil
The solution structure of a protein-protein interaction module from a family 84 glycoside hydrolase of Clostridium perfringens
分子名称: O-GlcNAcase nagJ
著者Chitayat, S, Adams, J.J, Gregg, K, Boraston, A.B, Smith, S.P.
登録日2006-12-04
公開日2007-11-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of a putative non-cellulosomal cohesin module from a Clostridium perfringens family 84 glycoside hydrolase.
J.Mol.Biol., 375, 2008
5KD2
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BU of 5kd2 by Molmil
BT_4244 metallopeptidase from Bacteroides thetaiotaomicron
分子名称: 1,2-ETHANEDIOL, ZINC ION, metallopeptidase
著者Noach, I, Boraston, A.B.
登録日2016-06-07
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5KDJ
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BU of 5kdj by Molmil
ZmpB metallopeptidase from Clostridium perfringens
分子名称: F5/8 type C domain protein, GLYCEROL, SODIUM ION, ...
著者Noach, I, Ficko-Blean, E, Stuart, C, Boraston, A.B.
登録日2016-06-08
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2YL6
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BU of 2yl6 by Molmil
Inhibition of the pneumococcal virulence factor StrH and molecular insights into N-glycan recognition and hydrolysis
分子名称: 1,2-ETHANEDIOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, BETA-N-ACETYLHEXOSAMINIDASE, ...
著者Pluvinage, B, Higgins, M.A, Abbott, D.W, Robb, C, Dalia, A.B, Deng, L, Weiser, J.N, Parsons, T.B, Fairbanks, A.J, Vocadlo, D.J, Boraston, A.B.
登録日2011-05-31
公開日2011-09-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Inhibition of the Pneumococcal Virulence Factor Strh and Molecular Insights Into N-Glycan Recognition and Hydrolysis.
Structure, 19, 2011
2YL9
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BU of 2yl9 by Molmil
INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-N-ACETYLHEXOSAMINIDASE
著者Pluvinage, B, Higgins, M.A, Abbott, D.W, Robb, C, Dalia, A.B, Deng, L, Weiser, J.N, Parsons, T.B, Fairbanks, A.J, Vocadlo, D.J, Boraston, A.B.
登録日2011-06-01
公開日2011-09-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Inhibition of the Pneumococcal Virulence Factor Strh and Molecular Insights Into N-Glycan Recognition and Hydrolysis.
Structure, 19, 2011
2YL8
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BU of 2yl8 by Molmil
Inhibition of the pneumococcal virulence factor StrH and molecular insights into N-glycan recognition and hydrolysis
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, BETA-N-ACETYLHEXOSAMINIDASE, ...
著者Pluvinage, B, Higgins, M.A, Abbott, D.W, Robb, C, Dalia, A.B, Deng, L, Weiser, J.N, Parsons, T.B, Fairbanks, A.J, Vocadlo, D.J, Boraston, A.B.
登録日2011-05-31
公開日2011-09-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Inhibition of the Pneumococcal Virulence Factor Strh and Molecular Insights Into N-Glycan Recognition and Hydrolysis.
Structure, 19, 2011
7LH6
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BU of 7lh6 by Molmil
The structure of Bacteroides plebeius L-galactose dehydrogenase
分子名称: L-galactose dehydrogenase
著者Robb, C.S, Pluvinage, B, Vickers, C, Boraston, A.B.
登録日2021-01-21
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Metabolism of a hybrid algal galactan by members of the human gut microbiome.
Nat.Chem.Biol., 18, 2022
2YL5
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BU of 2yl5 by Molmil
Inhibition of the pneumococcal virulence factor StrH and molecular insights into N-glycan recognition and hydrolysis
分子名称: 1,2-ETHANEDIOL, BETA-N-ACETYLHEXOSAMINIDASE, MAGNESIUM ION
著者Pluvinage, B, Higgins, M.A, Abbott, D.W, Robb, C, Dalia, A.B, Deng, L, Weiser, J.N, Parsons, T.B, Fairbanks, A.J, Vocadlo, D.J, Boraston, A.B.
登録日2011-05-31
公開日2011-09-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Inhibition of the Pneumococcal Virulence Factor Strh and Molecular Insights Into N-Glycan Recognition and Hydrolysis.
Structure, 19, 2011

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