2F5S
| Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC1 | 分子名称: | 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*(8OG)P*AP*GP*TP*CP*TP*AP*CP*C)-3', ZINC ION, ... | 著者 | Banerjee, A, Santos, W.L, Verdine, G.L. | 登録日 | 2005-11-26 | 公開日 | 2006-03-07 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Structure of a DNA glycosylase searching for lesions. Science, 311, 2006
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2F5Q
| Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC2 | 分子名称: | 5'-D(*AP*GP*G*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*G*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3', ZINC ION, ... | 著者 | Banerjee, A, Santos, W.L, Verdine, G.L. | 登録日 | 2005-11-26 | 公開日 | 2006-03-07 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Structure of a DNA glycosylase searching for lesions. Science, 311, 2006
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2F5P
| MutM crosslinked to undamaged DNA sampling A:T base pair IC2 | 分子名称: | 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*G*TP*CP*CP*AP*AP*GP*TP*CP*TP*AP*CP*C)-3', ZINC ION, ... | 著者 | Banerjee, A, Santos, W.L, Verdine, G.L. | 登録日 | 2005-11-26 | 公開日 | 2006-03-07 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of a DNA glycosylase searching for lesions. Science, 311, 2006
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2HZD
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2I5W
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6EDE
| tRNA 2'-phosphotransferase | 分子名称: | Probable RNA 2'-phosphotransferase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2018-08-09 | 公開日 | 2019-03-20 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.553 Å) | 主引用文献 | Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO4recognition and ADP-ribosylation. Nat Commun, 10, 2019
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6E3A
| tRNA 2'-phosphotransferase | 分子名称: | COENZYME A, Probable RNA 2'-phosphotransferase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2018-07-13 | 公開日 | 2019-03-20 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO4recognition and ADP-ribosylation. Nat Commun, 10, 2019
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5YPP
| Crystal structure of IlvN.Val-1a | 分子名称: | ACETATE ION, Acetolactate synthase isozyme 1 small subunit, DI(HYDROXYETHYL)ETHER, ... | 著者 | Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B. | 登録日 | 2017-11-02 | 公開日 | 2018-09-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases. Biochemistry, 58, 2019
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5YPW
| Crystal structure of IlvN.Val-1b | 分子名称: | Acetolactate synthase isozyme 1 small subunit, VALINE | 著者 | Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B. | 登録日 | 2017-11-03 | 公開日 | 2018-09-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases. Biochemistry, 58, 2019
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5YPY
| Crystal structure of IlvN. Val-1c | 分子名称: | Acetolactate synthase isozyme 1 small subunit, VALINE | 著者 | Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B. | 登録日 | 2017-11-04 | 公開日 | 2018-09-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.966 Å) | 主引用文献 | Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases. Biochemistry, 58, 2019
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5YUM
| Crystallographic structures of IlvN.Val/Ile complexes:Conformational selectivity for feedback inhibition of AHASs | 分子名称: | Acetolactate synthase isozyme 1 small subunit, COBALT (II) ION, ISOLEUCINE | 著者 | Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B. | 登録日 | 2017-11-22 | 公開日 | 2018-09-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.432 Å) | 主引用文献 | Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases. Biochemistry, 58, 2019
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7V0N
| Cryo-EM structure of SINV/EEEV in complex with Fab fragment of a moderately/weakly neutralizing human antibody IgG-21 | 分子名称: | IgG 21 Fab heavy chain, IgG 21 Fab light chain, Spike glycoprotein E1, ... | 著者 | Bandyopadhyay, A, Klose, T, Kuhn, R.J. | 登録日 | 2022-05-10 | 公開日 | 2023-04-05 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON MICROSCOPY (5.9 Å) | 主引用文献 | Structural constraints link differences in neutralization potency of human anti-Eastern equine encephalitis virus monoclonal antibodies. Proc.Natl.Acad.Sci.USA, 120, 2023
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7V0O
| Cryo-EM structure of SINV/EEEV in complex with Fab fragment of a moderately/weakly neutralizing human antibody IgG-94 | 分子名称: | IgG 94 Fab heavy chain, IgG 94 Fab light chain, Spike glycoprotein E1, ... | 著者 | Bandyopadhyay, A, Klose, T, Kuhn, R.J. | 登録日 | 2022-05-10 | 公開日 | 2023-04-05 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON MICROSCOPY (6.6 Å) | 主引用文献 | Structural constraints link differences in neutralization potency of human anti-Eastern equine encephalitis virus monoclonal antibodies. Proc.Natl.Acad.Sci.USA, 120, 2023
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7V0P
| Cryo-EM structure of SINV/EEEV in complex with Fab fragment of a potently neutralizing human antibody IgG-106 | 分子名称: | IgG 106 Fab heavy chain, IgG 106 Fab light chain, Spike glycoprotein E1, ... | 著者 | Bandyopadhyay, A, Klose, T, Kuhn, R.J. | 登録日 | 2022-05-10 | 公開日 | 2023-04-05 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON MICROSCOPY (5.2 Å) | 主引用文献 | Structural constraints link differences in neutralization potency of human anti-Eastern equine encephalitis virus monoclonal antibodies. Proc.Natl.Acad.Sci.USA, 120, 2023
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4JTA
| Crystal structure of Kv1.2-2.1 paddle chimera channel in complex with Charybdotoxin | 分子名称: | (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, ... | 著者 | MacKinnon, R, Banerjee, A, Lee, A, Campbell, E. | 登録日 | 2013-03-23 | 公開日 | 2013-06-12 | 最終更新日 | 2019-12-25 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structure of a pore-blocking toxin in complex with a eukaryotic voltage-dependent K(+) channel. Elife, 2, 2013
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6QSN
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6BK9
| Crystal Structure of Squid Arrestin | 分子名称: | CHLORIDE ION, Visual arrestin | 著者 | Eger, B.T, Bandyopadhyay, A, Yedidi, R.S, Ernst, O.P. | 登録日 | 2017-11-08 | 公開日 | 2018-09-19 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (3.00005579 Å) | 主引用文献 | A Novel Polar Core and Weakly Fixed C-Tail in Squid Arrestin Provide New Insight into Interaction with Rhodopsin. J. Mol. Biol., 430, 2018
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6TZX
| Crystal Structure of Fungal RNA Kinase | 分子名称: | INOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, tRNA ligase | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2019-08-13 | 公開日 | 2019-11-06 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.529 Å) | 主引用文献 | Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor. Nucleic Acids Res., 47, 2019
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6U03
| Crystal Structure of Fungal RNA Kinase | 分子名称: | GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA ligase | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2019-08-13 | 公開日 | 2019-11-06 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.849 Å) | 主引用文献 | Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor. Nucleic Acids Res., 47, 2019
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6U05
| Crystal Structure of Fungal RNA Kinase | 分子名称: | GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ... | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2019-08-13 | 公開日 | 2019-11-06 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.948 Å) | 主引用文献 | Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor. Nucleic Acids Res., 47, 2019
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6U00
| Crystal Structure of Fungal RNA Kinase | 分子名称: | PHOSPHATE ION, tRNA ligase | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2019-08-13 | 公開日 | 2019-11-06 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.981 Å) | 主引用文献 | Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor. Nucleic Acids Res., 47, 2019
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6TZO
| Crystal Structure of Fungal RNA Kinase | 分子名称: | 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, tRNA ligase | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2019-08-12 | 公開日 | 2019-11-06 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.69 Å) | 主引用文献 | Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor. Nucleic Acids Res., 47, 2019
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7LFQ
| Pyrococcus RNA ligase | 分子名称: | DNA (5'-D(*AP*TP*GP*TP*CP*C)-3'), POTASSIUM ION, RNA-splicing ligase RtcB, ... | 著者 | Goldgur, Y, Shuman, S, Banerjee, A. | 登録日 | 2021-01-18 | 公開日 | 2021-03-03 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structure of 3'-PO 4 /5'-OH RNA ligase RtcB in complex with a 5'-OH oligonucleotide. Rna, 27, 2021
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6TZM
| Crystal Structure of Fungal RNA Kinase | 分子名称: | GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, tRNA ligase | 著者 | Shuman, S, Goldgur, Y, Banerjee, A. | 登録日 | 2019-08-12 | 公開日 | 2019-11-06 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.714 Å) | 主引用文献 | Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor. Nucleic Acids Res., 47, 2019
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3SAR
| MUTM Slanted complex 1 | 分子名称: | 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*GP*GP*TP*(CX2) P*TP*AP*CP*C)-3', Formamidopyrimidine-DNA glycosylase, ... | 著者 | Banerjee, A, Qi, Y, Spong, M.C, Verdine, G.L. | 登録日 | 2011-06-03 | 公開日 | 2012-01-11 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Strandwise translocation of a DNA glycosylase on undamaged DNA. Proc.Natl.Acad.Sci.USA, 109, 2012
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