Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7UU5
DownloadVisualize
BU of 7uu5 by Molmil
Crystal structure of APOBEC3G complex with 5'-Overhang dsRNA
分子名称: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*AP*AP*CP*CP*GP*CP*AP*GP*CP*G)-3'), RNA (5'-R(P*UP*AP*AP*CP*GP*CP*UP*GP*CP*GP*G)-3'), ...
著者Yang, H, Li, S, Chen, X.S.
登録日2022-04-28
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7UU4
DownloadVisualize
BU of 7uu4 by Molmil
Crystal structure of APOBEC3G complex with ssRNA
分子名称: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*AP*AP*UP*UP*U)-3'), SULFATE ION, ...
著者Yang, H, Li, S, Chen, X.S.
登録日2022-04-28
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7UU3
DownloadVisualize
BU of 7uu3 by Molmil
Crystal structure of APOBEC3G complex with 3'overhangs RNA-Complex
分子名称: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(*CP*CP*CP*AP*CP*GP*GP*GP*AP*AP*U)-3'), RNA (5'-R(*CP*CP*CP*GP*UP*GP*GP*GP*AP*AP*U)-3'), ...
著者Yang, H, Li, S, Chen, X.S.
登録日2022-04-28
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.099 Å)
主引用文献Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
8UD2
DownloadVisualize
BU of 8ud2 by Molmil
SARS-CoV-2 Nsp15, apo-form
分子名称: Non-structural protein 15
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (2.33 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 2024
8UD3
DownloadVisualize
BU of 8ud3 by Molmil
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, consensus form
分子名称: Non-structural protein 15, RNA (35-MER)
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 2024
8UD4
DownloadVisualize
BU of 8ud4 by Molmil
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 1
分子名称: Non-structural protein 15, RNA (35-MER)
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 2024
8UD5
DownloadVisualize
BU of 8ud5 by Molmil
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 2
分子名称: Non-structural protein 15, RNA (35-MER)
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 2024
8FVJ
DownloadVisualize
BU of 8fvj by Molmil
Dimeric form of HIV-1 Vif in complex with human CBF-beta, ELOB, ELOC, and CUL5
分子名称: Core-binding factor subunit beta, Cullin-5, Elongin-B, ...
著者Ito, F, Alvarez-Cabrera, A.L, Zhou, Z.H, Chen, X.S.
登録日2023-01-19
公開日2023-09-06
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural basis of HIV-1 Vif-mediated E3 ligase targeting of host APOBEC3H.
Nat Commun, 14, 2023
8FY6
DownloadVisualize
BU of 8fy6 by Molmil
SARS-CoV-2 main protease in complex with covalent inhibitor
分子名称: 3C-like proteinase nsp5, Nirmatrelvir (reacted form)
著者Fried, W, Chen, X.S.
登録日2023-01-25
公開日2023-08-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Alkyne as a Latent Warhead to Covalently Target SARS-CoV-2 Main Protease.
J.Med.Chem., 66, 2023
8FY7
DownloadVisualize
BU of 8fy7 by Molmil
SARS-CoV-2 main protease in complex with covalent inhibitor
分子名称: 3C-like proteinase nsp5, 4-methoxy-N-[(2S)-4-methyl-1-oxo-1-({(2S)-1-[(3S)-2-oxopyrrolidin-3-yl]but-3-en-2-yl}amino)pentan-2-yl]-1H-indole-2-carboxamide
著者Fried, W, Chen, X.S.
登録日2023-01-25
公開日2023-08-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Alkyne as a Latent Warhead to Covalently Target SARS-CoV-2 Main Protease.
J.Med.Chem., 66, 2023
8FVI
DownloadVisualize
BU of 8fvi by Molmil
Human APOBEC3H bound to HIV-1 Vif in complex with CBF-beta, ELOB, ELOC, and CUL5
分子名称: Core-binding factor subunit beta, Cullin 5, DNA dC->dU-editing enzyme APOBEC-3H, ...
著者Ito, F, Alvarez-Cabrera, A.L, Zhou, Z.H, Chen, X.S.
登録日2023-01-19
公開日2023-09-06
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Structural basis of HIV-1 Vif-mediated E3 ligase targeting of host APOBEC3H.
Nat Commun, 14, 2023
8E40
DownloadVisualize
BU of 8e40 by Molmil
Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA
分子名称: Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, RNA, ...
著者Ito, F, Alvarez-Cabrera, A.L, Liu, S, Yang, H, Shiriaeva, A, Zhou, Z.H, Chen, X.S.
登録日2022-08-17
公開日2023-01-11
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Structural basis for HIV-1 antagonism of host APOBEC3G via Cullin E3 ligase.
Sci Adv, 9, 2023
8EDJ
DownloadVisualize
BU of 8edj by Molmil
Crystal structure of rA3G-ssRNA-GA
分子名称: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*GP*AP*UP*UP*U)-3'), SULFATE ION, ...
著者Pacheco, J, Yang, H.J, Li, S.-X, Chen, X.S.
登録日2022-09-04
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
4E2I
DownloadVisualize
BU of 4e2i by Molmil
The Complex Structure of the SV40 Helicase Large T Antigen and p68 Subunit of DNA Polymerase Alpha-Primase
分子名称: DNA polymerase alpha subunit B, Large T antigen, ZINC ION
著者Zhou, B, Arnett, D.R, Yu, X, Brewster, A, Sowd, G.A, Xie, C.L, Vila, S, Gai, D, Fanning, E, Chen, X.S.
登録日2012-03-08
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase alpha-primase.
J.Biol.Chem., 287, 2012
3BGW
DownloadVisualize
BU of 3bgw by Molmil
The Structure Of A DnaB-Like Replicative Helicase And Its Interactions With Primase
分子名称: DNAB-Like Replicative Helicase
著者Wang, G, Klein, M.G, Tokonzaba, E, Zhang, Y, Holden, L.G, Chen, X.S.
登録日2007-11-27
公開日2007-12-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.91 Å)
主引用文献The structure of a DnaB-family replicative helicase and its interactions with primase.
Nat.Struct.Mol.Biol., 15, 2008
2H1L
DownloadVisualize
BU of 2h1l by Molmil
The Structure of the Oncoprotein SV40 Large T Antigen and p53 Tumor Suppressor Complex
分子名称: Cellular tumor antigen p53, Large T antigen, ZINC ION
著者Lilyestrom, W, Klein, M.G, Chen, X.S.
登録日2006-05-16
公開日2006-09-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Crystal structure of SV40 large T-antigen bound to p53: interplay between a viral oncoprotein and a cellular tumor suppressor.
Genes Dev., 20, 2006
3BH0
DownloadVisualize
BU of 3bh0 by Molmil
ATPase Domain of G40P
分子名称: DNAB-LIKE REPLICATIVE HELICASE
著者Wang, G, Klein, M.G, Tokonzaba, E, Zhang, Y, Holden, L.G, Chen, X.S.
登録日2007-11-27
公開日2007-12-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The structure of a DnaB-family replicative helicase and its interactions with primase.
Nat.Struct.Mol.Biol., 15, 2008
2Q9Q
DownloadVisualize
BU of 2q9q by Molmil
The crystal structure of full length human GINS complex
分子名称: DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, GINS complex subunit 3, ...
著者Chang, Y.P, Wang, G, Chen, X.S.
登録日2007-06-13
公開日2007-08-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Crystal structure of the GINS complex and functional insights into its role in DNA replication.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5W1O
DownloadVisualize
BU of 5w1o by Molmil
Crystal Structure of HPV16 L1 Pentamer Bound to Heparin Oligosaccharides
分子名称: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose, 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose, Major capsid protein L1
著者Dasgupta, J, Chen, X.S.
登録日2017-06-04
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of oligosaccharide receptor recognition by human papillomavirus.
J. Biol. Chem., 286, 2011
5W2M
DownloadVisualize
BU of 5w2m by Molmil
APOBEC3F Catalytic Domain Complex with a Single-Stranded DNA
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3F, ZINC ION
著者Fang, Y, Xiao, X, Li, S.-X, Wolfe, A, Chen, X.S.
登録日2017-06-06
公開日2017-12-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Molecular Interactions of a DNA Modifying Enzyme APOBEC3F Catalytic Domain with a Single-Stranded DNA.
J. Mol. Biol., 430, 2018
5W45
DownloadVisualize
BU of 5w45 by Molmil
Crystal structure of APOBEC3H
分子名称: APOBEC3H, ZINC ION
著者Ito, F, Yang, H.J, Xiao, X, Li, S.X, Wolfe, A, Zirkle, B, Arutiunian, V, Chen, X.S.
登録日2017-06-09
公開日2018-03-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.486 Å)
主引用文献Understanding the Structure, Multimerization, Subcellular Localization and mC Selectivity of a Genomic Mutator and Anti-HIV Factor APOBEC3H.
Sci Rep, 8, 2018
5TKM
DownloadVisualize
BU of 5tkm by Molmil
Crystal structure of human APOBEC3B N-terminal Domain
分子名称: DNA dC->dU-editing enzyme APOBEC-3B, ZINC ION
著者Xiao, X, Yang, H, Arutiunian, V, Besse, G, Morimoto, C, Zirkle, B, Chen, X.S.
登録日2016-10-07
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural determinants of APOBEC3B non-catalytic domain for molecular assembly and catalytic regulation.
Nucleic Acids Res., 45, 2017
4ME3
DownloadVisualize
BU of 4me3 by Molmil
1.8 Angstrom Crystal Structure of the N-terminal Domain of an Archaeal MCM
分子名称: DNA replication licensing factor MCM related protein, ZINC ION
著者Fu, Y, Slaymaker, I.M, Wang, G, Chen, X.S.
登録日2013-08-24
公開日2014-01-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献The 1.8- angstrom Crystal Structure of the N-Terminal Domain of an Archaeal MCM as a Right-Handed Filament.
J.Mol.Biol., 426, 2014
4GDF
DownloadVisualize
BU of 4gdf by Molmil
A Crystal Structure of SV40 Large T Antigen
分子名称: DNA (32-MER), Large T antigen, ZINC ION
著者Chang, Y.P, Xu, M, Chen, X.S.
登録日2012-07-31
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanism of Origin DNA Recognition and Assembly of an Initiator-Helicase Complex by SV40 Large Tumor Antigen.
Cell Rep, 3, 2013
4FDG
DownloadVisualize
BU of 4fdg by Molmil
Crystal Structure of an Archaeal MCM Filament
分子名称: Minichromosome maintenance protein MCM, ZINC ION
著者Slaymaker, I.M, Fu, Y, Brewster, A.B, Chen, X.S.
登録日2012-05-28
公開日2013-03-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Mini-chromosome maintenance complexes form a filament to remodel DNA structure and topology.
Nucleic Acids Res., 41, 2013

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon