Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2QFJ
DownloadVisualize
BU of 2qfj by Molmil
Crystal Structure of First Two RRM Domains of FIR Bound to ssDNA from a Portion of FUSE
分子名称: DNA (5'-D(*DTP*DCP*DGP*DGP*DGP*DAP*DTP*DTP*DTP*DTP*DTP*DTP*DAP*DTP*DTP*DTP*DTP*DGP*DTP*DGP*DTP*DTP*DAP*DTP*DT)-3'), FBP-interacting repressor
著者Crichlow, G.V, Yang, Y, Fan, C, Lolis, E, Braddock, D.
登録日2007-06-27
公開日2008-03-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Dimerization of FIR upon FUSE DNA binding suggests a mechanism of c-myc inhibition
EMBO J., 27, 2007
2OSE
DownloadVisualize
BU of 2ose by Molmil
Crystal Structure of the Mimivirus Cyclophilin
分子名称: CHLORIDE ION, Probable peptidyl-prolyl cis-trans isomerase
著者Eisenmesser, E.Z, Thai, V, Renesto, P, Raoult, D.
登録日2007-02-05
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural, biochemical, and in vivo characterization of the first virally encoded cyclophilin from the Mimivirus.
J.Mol.Biol., 378, 2008
7AFW
DownloadVisualize
BU of 7afw by Molmil
Beta-Catenin in complex with compound 6
分子名称: 3-[(2~{R})-4-methyl-5-oxidanylidene-2,3-dihydro-1,4-benzoxazepin-2-yl]benzenecarbonitrile, Catenin beta-1
著者Boettcher, J, Kessler, D.
登録日2020-09-21
公開日2020-12-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.814 Å)
主引用文献Getting a Grip on the Undrugged: Targeting beta-Catenin with Fragment-Based Methods.
Chemmedchem, 16, 2021
5V2G
DownloadVisualize
BU of 5v2g by Molmil
De Novo Design of Novel Covalent Constrained Meso-size Peptide Scaffolds with Unique Tertiary Structures
分子名称: 1,3,5-tris(bromomethyl)benzene, 20-mer Peptide
著者Dang, B, Wu, H, Mulligan, V.K, Mravic, M, Wu, Y, Lemmin, T, Ford, A, Silva, D, Baker, D, DeGrado, W.F.
登録日2017-03-03
公開日2017-09-27
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献De novo design of covalently constrained mesosize protein scaffolds with unique tertiary structures.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2P4L
DownloadVisualize
BU of 2p4l by Molmil
Structure and sodium channel activity of an excitatory I1-superfamily conotoxin
分子名称: I-superfamily conotoxin r11a
著者Buczek, O, Wei, D.X, Babon, J.J, Yang, X.D, Fiedler, B, Yoshikami, D, Olivera, B.M, Bulaj, G, Norton, R.S.
登録日2007-03-12
公開日2007-09-25
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure and Sodium Channel Activity of an Excitatory I(1)-Superfamily Conotoxin
Biochemistry, 46, 2007
7APM
DownloadVisualize
BU of 7apm by Molmil
tRNA-guanine transglycosylase H319C mutant spin-labeled with MTSL.
分子名称: CHLORIDE ION, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
著者Nguyen, D, Heine, A, Klebe, G.
登録日2020-10-18
公開日2020-10-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Unraveling a Ligand-Induced Twist of a Homodimeric Enzyme by Pulsed Electron-Electron Double Resonance.
Angew.Chem.Int.Ed.Engl., 60, 2021
4DFF
DownloadVisualize
BU of 4dff by Molmil
The SAR development of dihydroimidazoisoquinoline derivatives as phosphodiesterase 10A inhibitors for the treatment of schizophrenia
分子名称: 8,9-dimethoxy-1-(1,3-thiazol-5-yl)-5,6-dihydroimidazo[5,1-a]isoquinoline, MAGNESIUM ION, ZINC ION, ...
著者Ho, G.D, Seganish, W.M, Bercovici, A, Tulshian, D, Greenlee, W.J, Van Rijn, R, Hruza, A, Xiao, L, Rindgen, D, Mullins, D, Guzzi, M, Zhang, X, Bleichardt, C, Hodgson, R.
登録日2012-01-23
公開日2012-03-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献The SAR development of dihydroimidazoisoquinoline derivatives as phosphodiesterase 10A inhibitors for the treatment of schizophrenia.
Bioorg.Med.Chem.Lett., 22, 2012
8V3V
DownloadVisualize
BU of 8v3v by Molmil
ACAD11 D753N with 4-phosphovaleryl-CoA
分子名称: Acyl-Coenzyme A dehydrogenase family, member 11, FLAVIN-ADENINE DINUCLEOTIDE
著者Zhang, J, Bartlett, A, Rashan, E, Yuan, P, Pagliarini, D.
登録日2023-11-28
公開日2024-12-11
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献ACAD10 and ACAD11 enable mammalian 4-hydroxy acid lipid catabolism.
Nat.Struct.Mol.Biol., 2025
8V3U
DownloadVisualize
BU of 8v3u by Molmil
ACAD11 D220A with 4-hydroxyvaleryl-CoA
分子名称: Acyl-Coenzyme A dehydrogenase family, member 11, FLAVIN-ADENINE DINUCLEOTIDE
著者Zhang, J, Bartlett, A, Rashan, E, Yuan, P, Pagliarini, D.
登録日2023-11-28
公開日2024-12-11
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献ACAD10 and ACAD11 enable mammalian 4-hydroxy acid lipid catabolism.
Nat.Struct.Mol.Biol., 2025
7APL
DownloadVisualize
BU of 7apl by Molmil
tRNA-guanine transglycosylase G87C mutant spin-labeled with MTSL
分子名称: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION
著者Nguyen, D, Heine, A, Klebe, G.
登録日2020-10-18
公開日2020-10-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Unraveling a Ligand-Induced Twist of a Homodimeric Enzyme by Pulsed Electron-Electron Double Resonance.
Angew.Chem.Int.Ed.Engl., 60, 2021
7AXE
DownloadVisualize
BU of 7axe by Molmil
Crystal structure of the hPXR-LBD in complex with oxadiazon
分子名称: GLYCEROL, ISOPROPYL ALCOHOL, Nuclear receptor subfamily 1 group I member 2, ...
著者Harrus, D, Delfosse, V, Bourguet, W.
登録日2020-11-09
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic insights into the synergistic activation of the RXR-PXR heterodimer by endocrine disruptor mixtures.
Proc.Natl.Acad.Sci.USA, 118, 2021
7QBR
DownloadVisualize
BU of 7qbr by Molmil
Human butyrylcholinesterase in complex with (Z)-N-tert-butyl-1-(8-(3-(4-(prop-2-yn-1-yl)piperazin-1-yl)propoxy)quinolin-2-yl)methanimine oxide
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Denic, M, Chioua, M, Knez, D, Gobec, S, Nachon, F, Marco-Contelles, J.L, Brazzolotto, X.
登録日2021-11-19
公開日2022-11-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献8-Hydroxyquinolylnitrones as multifunctional ligands for the therapy of neurodegenerative diseases.
Acta Pharm Sin B, 13, 2023
7QBQ
DownloadVisualize
BU of 7qbq by Molmil
Human butyrylcholinesterase in complex with (Z)-N-benzyl-1-(8-hydroxyquinolin-2-yl)methanimine oxide
分子名称: 1-(8-oxidanylquinolin-2-yl)-N-(phenylmethyl)methanimine oxide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Denic, M, Chioua, M, Knez, D, Gobec, S, Nachon, F, Marco-Contelles, J.L, Brazzolotto, X.
登録日2021-11-19
公開日2022-11-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献8-Hydroxyquinolylnitrones as multifunctional ligands for the therapy of neurodegenerative diseases.
Acta Pharm Sin B, 13, 2023
7AXF
DownloadVisualize
BU of 7axf by Molmil
Crystal structure of the hPXR-LBD in complex with pretilachlor
分子名称: ISOPROPYL ALCOHOL, Nuclear receptor subfamily 1 group I member 2, pretilachlor
著者Harrus, D, Delfosse, V, Bourguet, W.
登録日2020-11-09
公開日2021-01-13
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Mechanistic insights into the synergistic activation of the RXR-PXR heterodimer by endocrine disruptor mixtures.
Proc.Natl.Acad.Sci.USA, 118, 2021
1PZ2
DownloadVisualize
BU of 1pz2 by Molmil
Crystal structure of a transient covalent reaction intermediate of a family 51 alpha-L-arabinofuranosidase
分子名称: Alpha-L-arabinofuranosidase, alpha-L-arabinofuranose
著者Hoevel, K, Shallom, D, Niefind, K, Belakhov, V, Shoham, G, Baasov, T, Shoham, Y, Schomburg, D.
登録日2003-07-09
公開日2003-10-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase
Embo J., 22, 2003
8OTW
DownloadVisualize
BU of 8otw by Molmil
Cryo-EM structure of Strongylocentrotus purpuratus SLC9C1 in presence of cAMP
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Sperm-specific sodium proton exchanger
著者Yeo, H, Mehta, V, Gulati, A, Drew, D.
登録日2023-04-21
公開日2023-11-01
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structure and electromechanical coupling of a voltage-gated Na + /H + exchanger.
Nature, 623, 2023
8OQH
DownloadVisualize
BU of 8oqh by Molmil
Structure of the cytosolic domain of lysosome-associated TMEM55B
分子名称: Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase, ZINC ION
著者Waschbusch, D, Khan, A.R.
登録日2023-04-12
公開日2023-11-29
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structure of the cytosolic domain of lysosome-associated TMEM55B
To be published
7AMT
DownloadVisualize
BU of 7amt by Molmil
Structure of LuxR with DNA (activation)
分子名称: DNA (5'-D(P*AP*TP*AP*AP*TP*GP*AP*CP*AP*TP*TP*AP*CP*TP*GP*TP*AP*TP*AP*TP*A)-3'), DNA (5'-D(P*TP*AP*TP*AP*TP*AP*CP*AP*GP*TP*AP*AP*TP*GP*TP*CP*AP*TP*TP*AP*T)-3'), HTH-type transcriptional regulator LuxR
著者Liu, B, Reverter, D.
登録日2020-10-09
公開日2021-03-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Binding site profiles and N-terminal minor groove interactions of the master quorum-sensing regulator LuxR enable flexible control of gene activation and repression.
Nucleic Acids Res., 49, 2021
7AMN
DownloadVisualize
BU of 7amn by Molmil
Structure of LuxR with DNA (repression)
分子名称: DNA (5'-D(P*TP*AP*TP*TP*GP*AP*TP*AP*AP*AP*AP*TP*TP*AP*TP*CP*AP*AP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*AP*TP*TP*GP*AP*TP*AP*AP*TP*TP*TP*TP*AP*TP*CP*AP*AP*TP*A)-3'), HTH-type transcriptional regulator LuxR
著者Liu, B, Reverter, D.
登録日2020-10-09
公開日2021-03-31
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Binding site profiles and N-terminal minor groove interactions of the master quorum-sensing regulator LuxR enable flexible control of gene activation and repression.
Nucleic Acids Res., 49, 2021
1S51
DownloadVisualize
BU of 1s51 by Molmil
Thr24Ser Bacteriorhodopsin
分子名称: RETINAL, bacteriorhodopsin
著者Yohannan, S, Faham, S, Yang, D, Grosfeld, D, Chamberlain, A.K, Bowie, J.U.
登録日2004-01-19
公開日2004-03-02
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A C(alpha)-H.O Hydrogen Bond in a Membrane Protein Is Not Stabilizing
J.Am.Chem.Soc., 126, 2004
4FL3
DownloadVisualize
BU of 4fl3 by Molmil
Structural and Biophysical Characterization of the Syk Activation Switch
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Tyrosine-protein kinase SYK
著者Graedler, U, Schwarz, D, Dresing, V, Musil, M, Bomke, J, Frech, M, Jaekel, S, Rysiok, T, Mueller-Pompalla, D, Wegener, A.
登録日2012-06-14
公開日2012-11-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and biophysical characterization of the syk activation switch.
J.Mol.Biol., 425, 2013
1S54
DownloadVisualize
BU of 1s54 by Molmil
Thr24Ala Bacteriorhodopsin
分子名称: RETINAL, bacteriorhodopsin
著者Yohannan, S, Faham, S, Yang, D, Grosfeld, D, Chamberlain, A.K, Bowie, J.U.
登録日2004-01-19
公開日2004-03-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A C(alpha)-H.O Hydrogen Bond in a Membrane Protein Is Not Stabilizing
J.Am.Chem.Soc., 126, 2004
6ZYA
DownloadVisualize
BU of 6zya by Molmil
Extended human uromodulin filament core at 3.5 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Uromodulin, alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Stanisich, J.J, Zyla, D, Afanasyev, P, Xu, J, Pilhofer, M, Boeringer, D, Glockshuber, R.
登録日2020-07-31
公開日2020-09-02
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The cryo-EM structure of the human uromodulin filament core reveals a unique assembly mechanism.
Elife, 9, 2020
2QFC
DownloadVisualize
BU of 2qfc by Molmil
Crystal Structure of Bacillus thuringiensis PlcR complexed with PapR
分子名称: C-terminus pentapeptide from PapR protein, DI(HYDROXYETHYL)ETHER, PlcR protein
著者Declerck, N, Chaix, D, Rugani, N, Hoh, F, Arold, S.T.
登録日2007-06-27
公開日2007-11-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of PlcR: Insights into virulence regulation and evolution of quorum sensing in Gram-positive bacteria
Proc.Natl.Acad.Sci.Usa, 104, 2007
7AMZ
DownloadVisualize
BU of 7amz by Molmil
Crystal structure of human Butyrylcholinesterase in complex with N-((2S,3R)-4-((2,2-dimethylpropyl)amino)-3-hydroxy-1-phenylbutan-2-yl)-2,2-diphenylacetamide
分子名称: 2,2-dimethylpropyl-[(2~{R},3~{S})-3-(2,2-diphenylethanoylamino)-2-oxidanyl-4-phenyl-butyl]azanium, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Brazzolotto, X, Pasieka, A, Panek, D, Wieckowska, A.
登録日2020-10-10
公開日2021-05-26
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Discovery of multifunctional anti-Alzheimer's agents with a unique mechanism of action including inhibition of the enzyme butyrylcholinesterase and gamma-aminobutyric acid transporters.
Eur.J.Med.Chem., 218, 2021

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon