Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7DDD
DownloadVisualize
BU of 7ddd by Molmil
SARS-Cov2 S protein at close state
分子名称: Spike glycoprotein
著者Cong, Y, Liu, C.X.
登録日2020-10-28
公開日2020-11-25
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DK7
DownloadVisualize
BU of 7dk7 by Molmil
S-2H2-F3b structure, three RBDs are up and each RBD binds with a 2H2 Fab.
分子名称: Spike glycoprotein, The heavy chain fragment of 2H2 Fab, The light chain fragment of 2H2 Fab
著者Cong, Y, Wang, Y.F.
登録日2020-11-23
公開日2020-12-02
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (9.7 Å)
主引用文献Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7ECY
DownloadVisualize
BU of 7ecy by Molmil
EV-D68 in complex with 2H12 Fab (State 3)
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Xu, C, Cong, Y.
登録日2021-03-13
公開日2021-03-31
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections.
Nat Commun, 12, 2021
7EBZ
DownloadVisualize
BU of 7ebz by Molmil
EV-D68 in complex with 2H12 Fab (state S1)
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Xu, C, Cong, Y.
登録日2021-03-11
公開日2021-03-31
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections.
Nat Commun, 12, 2021
7EBR
DownloadVisualize
BU of 7ebr by Molmil
EV-D68 in complex with 2H12 Fab (state S2)
分子名称: 2H12 Fab heavy chain, 2H12 Fab light chain, Capsid protein VP1, ...
著者Xu, C, Cong, Y.
登録日2021-03-10
公開日2021-03-31
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections.
Nat Commun, 12, 2021
7EC5
DownloadVisualize
BU of 7ec5 by Molmil
EV-D68 in complex with 8F12 Fab
分子名称: 8F12 Fab heavy chain, 8F12 Fab light chain, Capsid protein VP1, ...
著者Xu, C, Cong, Y.
登録日2021-03-11
公開日2021-03-31
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections.
Nat Commun, 12, 2021
7ESV
DownloadVisualize
BU of 7esv by Molmil
Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY
分子名称: D(-)-TARTARIC ACID, Packaging NTPase
著者Zhang, C.Y, Jin, T.C.
登録日2021-05-11
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY.
Int.J.Biol.Macromol., 194, 2022
7ESQ
DownloadVisualize
BU of 7esq by Molmil
Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, PYROPHOSPHATE, ...
著者Zhang, C.Y, Jin, T.C.
登録日2021-05-11
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY.
Int.J.Biol.Macromol., 194, 2022
7ESP
DownloadVisualize
BU of 7esp by Molmil
Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY
分子名称: D(-)-TARTARIC ACID, DI(HYDROXYETHYL)ETHER, Packaging NTPase
著者Zhang, C.Y, Jin, T.C.
登録日2021-05-11
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY.
Int.J.Biol.Macromol., 194, 2022
7ESO
DownloadVisualize
BU of 7eso by Molmil
Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY
分子名称: Packaging NTPase
著者Zhang, C.Y, Jin, T.C.
登録日2021-05-11
公開日2022-03-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY.
Int.J.Biol.Macromol., 194, 2022
7DCD
DownloadVisualize
BU of 7dcd by Molmil
Nonstructural protein 7 and 8 complex of SARS-CoV-2
分子名称: Non-structural protein 7, Non-structural protein 8
著者Zhang, C.H, Li, L, Su, D.
登録日2020-10-24
公開日2021-03-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Nonstructural protein 7 and 8 complexes of SARS-CoV-2.
Protein Sci., 30, 2021
8JJC
DownloadVisualize
BU of 8jjc by Molmil
Tubulin-Y62
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(6,7-dimethoxy-3,4-dihydro-1~{H}-isoquinolin-2-yl)-6-(3-methoxyphenyl)pyrimidin-2-amine, CALCIUM ION, ...
著者Yang, J.
登録日2023-05-30
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structure-based design and synthesis of BML284 derivatives: A novel class of colchicine-site noncovalent tubulin degradation agents.
Eur.J.Med.Chem., 268, 2024
8JJB
DownloadVisualize
BU of 8jjb by Molmil
Crystal structure of T2R-TTL-Y61 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Yang, J.
登録日2023-05-30
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structure-based design and synthesis of BML284 derivatives: A novel class of colchicine-site noncovalent tubulin degradation agents.
Eur.J.Med.Chem., 268, 2024
7Y7M
DownloadVisualize
BU of 7y7m by Molmil
The structure of coxsackievirus A16 mature virion in complex with Fab 8C4
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Cong, Y, Liu, C.X.
登録日2022-06-22
公開日2022-08-24
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YRH
DownloadVisualize
BU of 7yrh by Molmil
Cryo-EM structure of compact coxsackievirus A16 empty particle in complex with a neutralizing antibody 9B5
分子名称: Capsid protein VP1, Capsid protein VP3, Genome polyprotein, ...
著者Cong, Y, Liu, C.X.
登録日2022-08-10
公開日2022-09-14
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YRF
DownloadVisualize
BU of 7yrf by Molmil
Cryo-EM structure of compact CA16 empty particle in complex with a neutralizing antibody 8C4
分子名称: Capsid protein VP3, Genome polyprotein, Light chain of chain, ...
著者Cong, Y, Liu, C.X.
登録日2022-08-09
公開日2022-09-14
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YV7
DownloadVisualize
BU of 7yv7 by Molmil
Cryo-EM structure of expanded coxsackievirus A16 empty particle in complex with antibody 9B5
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Cong, Y, Liu, C.X.
登録日2022-08-18
公開日2022-10-19
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YV2
DownloadVisualize
BU of 7yv2 by Molmil
Cryo-EM structure of expanded coxsackievirus A16 empty particle after incubation with 8C4 antibody
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
著者Cong, Y, Liu, C.X.
登録日2022-08-18
公開日2022-10-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YMS
DownloadVisualize
BU of 7yms by Molmil
Cryo-EM structure of Coxsackievirus A16 in complex with a neutralizing antibody 9B5
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Cong, Y, Liu, C.X.
登録日2022-07-29
公開日2022-08-24
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
5DDS
DownloadVisualize
BU of 5dds by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with PLP
分子名称: ACETIC ACID, CrmG, GLYCEROL, ...
著者Xu, J, Feng, Z, Liu, J.
登録日2015-08-25
公開日2016-08-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Biochemical and Structural Insights into the Aminotransferase CrmG in Caerulomycin Biosynthesis
Acs Chem.Biol., 11, 2016
5DDW
DownloadVisualize
BU of 5ddw by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with the PMP external aldimine adduct with Caerulomycin M
分子名称: CrmG, GLYCEROL, [5-hydroxy-4-({(E)-[(4-hydroxy-2,2'-bipyridin-6-yl)methylidene]amino}methyl)-6-methylpyridin-3-yl]methyl dihydrogen phosphate
著者Xu, J, Feng, Z, Liu, J.
登録日2015-08-25
公開日2016-08-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Biochemical and Structural Insights into the Aminotransferase CrmG in Caerulomycin Biosynthesis
Acs Chem.Biol., 11, 2016
3ET2
DownloadVisualize
BU of 3et2 by Molmil
Structure of PPARdelta with 3-[5-Methoxy-1-(4-methoxy-benzenesulfonyl)-1H-indol-3-yl]-propionic acid
分子名称: 1-BUTANOL, 3-{5-methoxy-1-[(4-methoxyphenyl)sulfonyl]-1H-indol-3-yl}propanoic acid, Peroxisome proliferator-activated receptor delta
著者Zhang, K.Y.J, Wang, W.
登録日2008-10-06
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Scaffold-based discovery of indeglitazar, a PPAR pan-active anti-diabetic agent
Proc.Natl.Acad.Sci.USA, 106, 2009
3ET1
DownloadVisualize
BU of 3et1 by Molmil
Structure of PPARalpha with 3-[5-Methoxy-1-(4-methoxy-benzenesulfonyl)-1H-indol-3-yl]-propionic acid
分子名称: 3-{5-methoxy-1-[(4-methoxyphenyl)sulfonyl]-1H-indol-3-yl}propanoic acid, Peroxisome proliferator-activated receptor alpha, Steroid receptor coactivator 1
著者Zhang, K.Y.J, Wang, W.
登録日2008-10-06
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Scaffold-based discovery of indeglitazar, a PPAR pan-active anti-diabetic agent
Proc.Natl.Acad.Sci.USA, 106, 2009
3ET0
DownloadVisualize
BU of 3et0 by Molmil
Structure of PPARgamma with 3-(5-Methoxy-1H-indol-3-yl)-propionic acid
分子名称: 3-(5-methoxy-1H-indol-3-yl)propanoic acid, Peroxisome proliferator-activated receptor gamma, alpha-D-glucopyranose
著者Zhang, K.Y.J, Wang, W.
登録日2008-10-06
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Scaffold-based discovery of indeglitazar, a PPAR pan-active anti-diabetic agent
Proc.Natl.Acad.Sci.USA, 106, 2009
3ET3
DownloadVisualize
BU of 3et3 by Molmil
Structure of PPARgamma with 3-[5-Methoxy-1-(4-methoxy-benzenesulfonyl)-1H-indol-3-yl]-propionic acid
分子名称: 3-{5-methoxy-1-[(4-methoxyphenyl)sulfonyl]-1H-indol-3-yl}propanoic acid, Peroxisome proliferator-activated receptor gamma, Steroid receptor coactivator 1
著者Zhang, K.Y.J, Wang, W.
登録日2008-10-06
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Scaffold-based discovery of indeglitazar, a PPAR pan-active anti-diabetic agent
Proc.Natl.Acad.Sci.USA, 106, 2009

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon