Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2ZZJ
DownloadVisualize
BU of 2zzj by Molmil
Crystal structure of endo-beta-1,4-glucuronan lyase from fungus Trichoderma reesei
分子名称: CALCIUM ION, CITRIC ACID, Glucuronan lyase A
著者Konno, N, Ishida, T, Fushinobu, S, Igarashi, K, Habu, N, Samejima, M, Isogai, A.
登録日2009-02-16
公開日2009-05-05
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of polysaccharide lyase family 20 endo-beta-1,4-glucuronan lyase from the filamentous fungus Trichoderma reesei.
Febs Lett., 583, 2009
2ZP7
DownloadVisualize
BU of 2zp7 by Molmil
Crystal structure of LysN, alpha-aminoadipate aminotransferase (Leucine complex), from Thermus thermophilus HB27
分子名称: Alpha-aminodipate aminotransferase, LEUCINE, PYRIDOXAL-5'-PHOSPHATE
著者Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
登録日2008-06-30
公開日2009-01-13
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Mechanism for multiple-substrates recognition of alpha-aminoadipate aminotransferase from Thermus thermophilus
Proteins, 2008
2Z1Y
DownloadVisualize
BU of 2z1y by Molmil
Crystal structure of LysN, alpha-aminoadipate aminotransferase (complexed with N-(5'-phosphopyridoxyl)-L-leucine), from Thermus thermophilus HB27
分子名称: 2-aminoadipate transaminase, LEUCINE, PYRIDOXAL-5'-PHOSPHATE
著者Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
登録日2007-05-16
公開日2008-06-03
最終更新日2025-01-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mechanism of broad substrate specificity of alpha-aminoadipate aminotransferase from Thermus thermophilus
To be Published
2ZXQ
DownloadVisualize
BU of 2zxq by Molmil
Crystal structure of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Endo-alpha-N-acetylgalactosaminidase, MANGANESE (II) ION
著者Suzuki, R, Katayama, T, Ashida, H, Yamamoto, K, Kitaoka, M, Fushinobu, S.
登録日2009-01-05
公開日2009-06-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and mutational analyses of substrate recognition of endo-{alpha}-N-acetylgalactosaminidase from Bifidobacterium longum.
J.Biochem., 2009
3CBF
DownloadVisualize
BU of 3cbf by Molmil
Crystal structure of LysN, alpha-aminoadipate aminotransferase, from Thermus thermophilus HB27
分子名称: (2S)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]hexanedioic acid, Alpha-aminodipate aminotransferase
著者Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
登録日2008-02-21
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Mechanism for multiple-substrates recognition of alpha-aminoadipate aminotransferase from Thermus thermophilus
Proteins, 2008
6YQH
DownloadVisualize
BU of 6yqh by Molmil
GH146 beta-L-arabinofuranosidase bound to covalent inhibitor
分子名称: (1~{S},2~{S},3~{S},4~{S})-4-(hydroxymethyl)cyclopentane-1,2,3-triol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Acetyl-CoA carboxylase, ...
著者McGregor, N.G.S, Davies, G.J.
登録日2020-04-17
公開日2021-01-27
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Cysteine Nucleophiles in Glycosidase Catalysis: Application of a Covalent beta-l-Arabinofuranosidase Inhibitor.
Angew.Chem.Int.Ed.Engl., 60, 2021
4ZM7
DownloadVisualize
BU of 4zm7 by Molmil
PcCel45A N105D mutatnt at cryo condition
分子名称: Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2015-05-02
公開日2015-09-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (0.701 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3WKX
DownloadVisualize
BU of 3wkx by Molmil
Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form
分子名称: Non-reducing end beta-L-arabinofuranosidase, ZINC ION, beta-L-arabinofuranose
著者Ito, T, Saikawa, K, Arakawa, T, Wakagi, T, Fujita, K.
登録日2013-11-01
公開日2014-04-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of glycoside hydrolase family 127 beta-l-arabinofuranosidase from Bifidobacterium longum.
Biochem.Biophys.Res.Commun., 447, 2014
3WKW
DownloadVisualize
BU of 3wkw by Molmil
Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form
分子名称: Non-reducing end beta-L-arabinofuranosidase
著者Ito, T, Saikawa, K, Arakawa, T, Wakagi, T, Fujita, K.
登録日2013-11-01
公開日2014-04-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of glycoside hydrolase family 127 beta-l-arabinofuranosidase from Bifidobacterium longum.
Biochem.Biophys.Res.Commun., 447, 2014
3X2M
DownloadVisualize
BU of 3x2m by Molmil
X-ray structure of PcCel45A with cellopentaose at 0.64 angstrom resolution.
分子名称: Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (0.64 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2P
DownloadVisualize
BU of 3x2p by Molmil
Neutron and X-ray joint refined structure of PcCel45A with cellopentaose at 298K.
分子名称: Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Tanaka, I, Niimura, N, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2025-03-26
実験手法NEUTRON DIFFRACTION (1.518 Å), X-RAY DIFFRACTION
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2O
DownloadVisualize
BU of 3x2o by Molmil
Neutron and X-ray joint refined structure of PcCel45A apo form at 298K.
分子名称: Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Tanaka, I, Niimura, N, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-07
最終更新日2025-03-26
実験手法NEUTRON DIFFRACTION (1.5 Å), X-RAY DIFFRACTION
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2K
DownloadVisualize
BU of 3x2k by Molmil
X-ray structure of PcCel45A D114N with cellopentaose at 95K.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-methylpentane-1,5-diol, Endoglucanase V-like protein, ...
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.182 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2I
DownloadVisualize
BU of 3x2i by Molmil
X-ray structure of PcCel45A N92D apo form at 298K.
分子名称: 3-methylpentane-1,5-diol, Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2G
DownloadVisualize
BU of 3x2g by Molmil
X-ray structure of PcCel45A N92D apo form at 100K
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-methylpentane-1,5-diol, Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2H
DownloadVisualize
BU of 3x2h by Molmil
X-ray structure of PcCel45A N92D with cellopentaose at 95K.
分子名称: 3-methylpentane-1,5-diol, Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-07
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2J
DownloadVisualize
BU of 3x2j by Molmil
X-ray structure of PcCel45A D114N apo form at 95K.
分子名称: 3-methylpentane-1,5-diol, Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.301 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3X2L
DownloadVisualize
BU of 3x2l by Molmil
X-ray structure of PcCel45A apo form at 95K.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-methylpentane-1,5-diol, Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Ohta, K, Tanaka, H, Inaka, K, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (0.83 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
2ZHO
DownloadVisualize
BU of 2zho by Molmil
Crystal structure of the regulatory subunit of aspartate kinase from Thermus thermophilus (ligand free form)
分子名称: Aspartokinase
著者Yoshida, A, Tomita, T, Kuzuyama, T, Nishiyama, M.
登録日2008-02-06
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Crystal structures of the regulatory subunit of Thr-sensitive aspartate kinase from Thermus thermophilus
Febs J., 276, 2009
7W8L
DownloadVisualize
BU of 7w8l by Molmil
Crystal Structure of Co-type nitrile hydratase mutant from Pseudonocardia thermophila - M46R
分子名称: COBALT (II) ION, Cobalt-containing nitrile hydratase subunit beta, Nitrile hydratase
著者Ma, D, Cheng, Z.Y, Hou, X.D, Peplowski, L, Lai, Q.P, Fu, K, Yin, D.J, Rao, Y.J, Zhou, Z.M.
登録日2021-12-08
公開日2022-08-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Insight into the broadened substrate scope of nitrile hydratase by static and dynamic structure analysis.
Chem Sci, 13, 2022
7W8M
DownloadVisualize
BU of 7w8m by Molmil
Crystal structure of Co-type nitrile hydratase mutant from Pseudomonas thermophila - A129R
分子名称: COBALT (II) ION, Cobalt-containing nitrile hydratase subunit beta, Nitrile hydratase
著者Ma, D, Cheng, Z.Y, Hou, X.D, Peplowski, L, Lai, Q.P, Fu, K, Yin, D.J, Rao, Y.J, Zhou, Z.M.
登録日2021-12-08
公開日2022-08-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insight into the broadened substrate scope of nitrile hydratase by static and dynamic structure analysis.
Chem Sci, 13, 2022
3AAW
DownloadVisualize
BU of 3aaw by Molmil
Crystal structure of aspartate kinase from Corynebacterium glutamicum in complex with lysine and threonine
分子名称: Aspartokinase, Aspartokinase LysC beta subunit, LYSINE, ...
著者Yoshida, A, Tomita, T, Kuzuyama, T, Nishiyama, M.
登録日2009-11-27
公開日2010-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism of concerted inhibition of {alpha}2{beta}2-type heterooligomeric aspartate kinase from Corynebacterium glutamicum
J.Biol.Chem., 285, 2010
3AB2
DownloadVisualize
BU of 3ab2 by Molmil
Crystal structure of aspartate kinase from Corynebacterium glutamicum in complex with threonine
分子名称: Aspartokinase, THREONINE
著者Yoshida, A, Tomita, T, Kuzuyama, T, Nishiyama, M.
登録日2009-11-30
公開日2010-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Mechanism of concerted inhibition of {alpha}2{beta}2-type heterooligomeric aspartate kinase from Corynebacterium glutamicum
J.Biol.Chem., 285, 2010
3AB4
DownloadVisualize
BU of 3ab4 by Molmil
Crystal structure of feedback inhibition resistant mutant of aspartate kinase from Corynebacterium glutamicum in complex with lysine and threonine
分子名称: Aspartokinase, LYSINE, THREONINE
著者Yoshida, A, Tomita, T, Kuzuyama, T, Nishiyama, M.
登録日2009-11-30
公開日2010-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Mechanism of concerted inhibition of {alpha}2{beta}2-type heterooligomeric aspartate kinase from Corynebacterium glutamicum
J.Biol.Chem., 285, 2010

236963

件を2025-06-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon