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8HAR
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BU of 8har by Molmil
SAH-bound C-Methyltransferase Fur6 from Streptomyces sp. KO-3988
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Fur6, S-ADENOSYL-L-HOMOCYSTEINE
著者Noguchi, T, Nagata, R, Tomita, T, Kuzuyama, T.
登録日2022-10-26
公開日2023-11-01
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Reductive biosynthesis of meroterpenoids via transient diazotization
To Be Published
8I4J
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BU of 8i4j by Molmil
Structure of wild-type Azami Green from Galaxea fascicularis
分子名称: Azami-Green
著者Otsubo, S, Takekawa, N, Imamura, H, Imada, K.
登録日2023-01-19
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Red fluorescent proteins engineered from green fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
8I4K
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BU of 8i4k by Molmil
Structure of Azami Red1.0, a red fluorescent protein engineered from Azami Green
分子名称: Azami Red1.0, CALCIUM ION
著者Otsubo, S, Takekawa, N, Imamura, H, Imada, K.
登録日2023-01-19
公開日2023-11-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Red fluorescent proteins engineered from green fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
4NNO
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BU of 4nno by Molmil
Crystal Structure of Manganese ABC transporter substrate-binding protein MntC from Staphylococcus Aureus bound to a Zinc ion
分子名称: Lipoprotein, ZINC ION
著者Rouge, L, Ahuja, S, Sudhamsu, J.
登録日2013-11-18
公開日2014-11-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.174 Å)
主引用文献Structural analysis of bacterial ABC transporter inhibition by an antibody fragment.
Structure, 23, 2015
2YY8
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BU of 2yy8 by Molmil
Crystal structure of archaeal tRNA-methylase for position 56 (aTrm56) from Pyrococcus horikoshii, complexed with S-adenosyl-L-methionine
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, UPF0106 protein PH0461
著者Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-03-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystal structure and mutational study of a unique SpoU family archaeal methylase that forms 2'-O-methylcytidine at position 56 of tRNA
J.Mol.Biol., 375, 2008
2YTZ
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BU of 2ytz by Molmil
Complex structure of Trm1 from Pyrococcus horikoshii with S-adenosyl-L-Homocystein in the orthorhombic crystal-lattice
分子名称: N(2),N(2)-dimethylguanosine tRNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
著者Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2007-10-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii
J.Mol.Biol., 383, 2008
4NNP
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BU of 4nnp by Molmil
Crystal Structure of Apo Manganese ABC transporter MntC from Staphylococcus aureus bound to an antagonistic fab fragment
分子名称: Heavy chain of antagonistic fab fragment, Light chain of antagonistic fab fragment, Lipoprotein
著者Rouge, L, Sudhamsu, J.
登録日2013-11-18
公開日2014-12-10
最終更新日2020-05-20
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural analysis of bacterial ABC transporter inhibition by an antibody fragment.
Structure, 23, 2015
3VSM
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BU of 3vsm by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
2Z98
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BU of 2z98 by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: Oxidized AzoR in tetragonal crystals (The resolution has improved from 1.8 (1v4b) to 1.4 angstrom)
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008
2Z9C
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BU of 2z9c by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: AzoR in complex with dicoumarol
分子名称: BISHYDROXY[2H-1-BENZOPYRAN-2-ONE,1,2-BENZOPYRONE], FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase, ...
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008
3VSN
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BU of 3vsn by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, IODIDE ION, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
3W1D
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BU of 3w1d by Molmil
Structure of a pressure sensitive YFP variant YFP-G3
分子名称: Green Fluorescent protein
著者Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
登録日2012-11-14
公開日2013-10-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
3W1C
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BU of 3w1c by Molmil
Structure of a pressure sensitive YFP variant YFP-G1
分子名称: Green Fluorescent protein
著者Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
登録日2012-11-14
公開日2013-10-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
2Z9D
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BU of 2z9d by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: Oxidized AzoR in orthorhombic crystals
分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008
2RSG
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BU of 2rsg by Molmil
Solution structure of the CERT PH domain
分子名称: Collagen type IV alpha-3-binding protein
著者Sugiki, T, Takeuchi, K, Tokunaga, Y, Kumagai, K, Kawano, M, Nishijima, M, Hanada, K, Takahashi, H, Shimada, I.
登録日2012-02-25
公開日2012-08-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for the Golgi association by the pleckstrin homology domain of the ceramide trafficking protein (CERT)
J.Biol.Chem., 287, 2012
2Z9B
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BU of 2z9b by Molmil
The crystal structure of AzoR (azoreductase) from Escherichia coli: Reduced AzoR in tetragonal crystals
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ito, K.
登録日2007-09-18
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Expansion of Substrate Specificity and Catalytic Mechanism of Azoreductase by X-ray Crystallography and Site-directed Mutagenesis
J.Biol.Chem., 283, 2008
7WBK
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BU of 7wbk by Molmil
Crystal structure of Legionella pneumophila effector protein Lpg0081
分子名称: Lpg0081, SULFATE ION
著者Lee, J, Kim, H, Oh, B.H.
登録日2021-12-16
公開日2022-06-15
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WBM
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BU of 7wbm by Molmil
Crystal structure of Legionella pneumophila effector protein Lpg0081
分子名称: Lpg0081, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Lee, J, Kim, H, Oh, B.H.
登録日2021-12-17
公開日2022-06-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XGO
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BU of 7xgo by Molmil
Human renin in complex with compound2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin, UNKNOWN LIGAND
著者Kashima, A.
登録日2022-04-05
公開日2022-08-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of Novel 2-Carbamoyl Morpholine Derivatives as Highly Potent and Orally Active Direct Renin Inhibitors.
Acs Med.Chem.Lett., 13, 2022
7XGK
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BU of 7xgk by Molmil
Human renin in complex with compound1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin, UNKNOWN LIGAND
著者Kashima, A.
登録日2022-04-05
公開日2022-08-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery of Novel 2-Carbamoyl Morpholine Derivatives as Highly Potent and Orally Active Direct Renin Inhibitors.
Acs Med.Chem.Lett., 13, 2022
3GFL
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BU of 3gfl by Molmil
Crystal structure of the ST1710 mutant (R90A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GF2
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BU of 3gf2 by Molmil
Crystal structure of the hypothetical regulator ST1710 complexed with sodium salicylate
分子名称: 146aa long hypothetical transcriptional regulator, 2-HYDROXYBENZOIC ACID
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GEZ
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BU of 3gez by Molmil
Crystal Structure of the hypothetical egulator from Sulfolobus tokodaii 7
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GFJ
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BU of 3gfj by Molmil
Crystal structure of the ST1710 mutant (R89A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GFI
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BU of 3gfi by Molmil
Crystal structure of ST1710 complexed with its promoter DNA
分子名称: 146aa long hypothetical transcriptional regulator, 5'-D(*TP*AP*AP*CP*AP*AP*TP*AP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*GP*CP*TP*AP*TP*TP*GP*T)-3'
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009

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