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5AEW
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BU of 5aew by Molmil
Crystal structure of II9 variant of Biphenyl dioxygenase from Burkholderia xenovorans LB400 in complex with biphenyl
分子名称: BIPHENYL, BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, ...
著者Dhindwal, S, Gomez-Gil, L, Sylvestre, M, Eltis, L.D, Bolin, J.T, Kumar, P.
登録日2015-01-10
公開日2016-04-06
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural Basis of the Enhanced Pollutant-Degrading Capabilities of an Engineered Biphenyl Dioxygenase.
J.Bacteriol., 198, 2016
4I14
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BU of 4i14 by Molmil
Crystal Structure of Mtb-ribA2 (Rv1415)
分子名称: Riboflavin biosynthesis protein RibBA, SULFATE ION, ZINC ION
著者Singh, M, Kumar, P, Yadav, S, Gautam, R, Sharma, N, Karthikeyan, S.
登録日2012-11-20
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The crystal structure reveals the molecular mechanism of bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II (Rv1415) from Mycobacterium tuberculosis
Acta Crystallogr.,Sect.D, 69, 2013
9J7H
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BU of 9j7h by Molmil
Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Providencia alcalifaciens complexed with quinic acid
分子名称: (1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid, Phospho-2-dehydro-3-deoxyheptonate aldolase
著者Jangid, K, Mahto, J.K, Kumar, K.A, Kumar, P.
登録日2024-08-19
公開日2025-01-22
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural and biochemical analyses reveal quinic acid inhibits DAHP synthase a key player in shikimate pathway.
Arch.Biochem.Biophys., 763, 2025
9J7S
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BU of 9j7s by Molmil
Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Providencia alcalifaciens complexed with Phe
分子名称: DI(HYDROXYETHYL)ETHER, PHENYLALANINE, Phospho-2-dehydro-3-deoxyheptonate aldolase
著者Jangid, K, Mahto, J.K, Kumar, K.A, Kumar, P.
登録日2024-08-19
公開日2025-01-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and biochemical analyses reveal quinic acid inhibits DAHP synthase a key player in shikimate pathway.
Arch.Biochem.Biophys., 763, 2025
9J5B
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BU of 9j5b by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with Dimethyl phthalate
分子名称: 1,2-ETHANEDIOL, ACETYL GROUP, Alpha/beta hydrolase fold-3 domain-containing protein, ...
著者Verma, S, Kumar, P.
登録日2024-08-11
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J1E
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BU of 9j1e by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus at 1.22A
分子名称: 1,2-ETHANEDIOL, ACETYL GROUP, Alpha/beta hydrolase fold-3 domain-containing protein, ...
著者Verma, S, Kumar, P.
登録日2024-08-04
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J1V
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BU of 9j1v by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with Monomethyl phthalate
分子名称: 1,2-ETHANEDIOL, 2-methoxycarbonylbenzoic acid, Alpha/beta hydrolase fold-3 domain-containing protein
著者Verma, S, Kumar, P.
登録日2024-08-05
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J1G
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BU of 9j1g by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with phthalate
分子名称: 1,2-ETHANEDIOL, Alpha/beta hydrolase fold-3 domain-containing protein, PHTHALIC ACID
著者Verma, S, Kumar, P.
登録日2024-08-05
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J5C
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BU of 9j5c by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with diethylhexyl phthalate
分子名称: Alpha/beta hydrolase fold-3 domain-containing protein, ~{O}1-[(2~{R})-2-ethylhexyl] ~{O}2-[(2~{S})-2-ethylhexyl] benzene-1,2-dicarboxylate
著者Verma, S, Kumar, P.
登録日2024-08-11
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J59
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BU of 9j59 by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus
分子名称: 1,2-ETHANEDIOL, Alpha/beta hydrolase fold-3 domain-containing protein
著者Verma, S, Kumar, P.
登録日2024-08-11
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J58
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BU of 9j58 by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with jeffamine
分子名称: 1,2-ETHANEDIOL, Alpha/beta hydrolase fold-3 domain-containing protein, MALONIC ACID, ...
著者Verma, S, Kumar, P.
登録日2024-08-11
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J57
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BU of 9j57 by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with paranitrophenyl butyrate
分子名称: (4-nitrophenyl) butanoate, 1,2-ETHANEDIOL, Alpha/beta hydrolase fold-3 domain-containing protein
著者Verma, S, Kumar, P.
登録日2024-08-11
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J5D
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BU of 9j5d by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with dimethyl phthalate on surface
分子名称: 1,2-ETHANEDIOL, ACETYL GROUP, Alpha/beta hydrolase fold-3 domain-containing protein, ...
著者Verma, S, Kumar, P.
登録日2024-08-11
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
9J5A
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BU of 9j5a by Molmil
ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with p-nitrophenol
分子名称: 1,2-ETHANEDIOL, ACETYL GROUP, Alpha/beta hydrolase fold-3 domain-containing protein, ...
著者Verma, S, Kumar, P.
登録日2024-08-11
公開日2024-12-25
最終更新日2025-02-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic and structural insights into EstS1 esterase: A potent broad-spectrum phthalate diester degrading enzyme.
Structure, 33, 2025
5ZH8
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BU of 5zh8 by Molmil
Crystal Structure of FmtA from Staphylococcus aureus at 2.58 A
分子名称: GLYCEROL, Protein FmtA
著者Dalal, V, Kumar, P, Golemi-Kotra, D, Kumar, P.
登録日2018-03-12
公開日2019-07-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Repurposing an Ancient Protein Core Structure: Structural Studies on FmtA, a Novel Esterase of Staphylococcus aureus.
J.Mol.Biol., 431, 2019
9J19
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BU of 9j19 by Molmil
The crystal structure of COVID-19 main protease in complex with an inhibitor minocycline
分子名称: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, 3C-like proteinase nsp5
著者Singh, A, Jangid, K, Dhaka, P, Tomar, S, Kumar, P.
登録日2024-08-04
公開日2025-02-12
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Mechanistic Insights into the Main Protease (Mpro) Dimer Interface Destabilization Inhibitor: Unveiling New Therapeutic Avenues against SARS-CoV-2.
Biochemistry, 64, 2025
9IN1
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BU of 9in1 by Molmil
Crystal Structure of C-terminal domain of nucleocapsid protein from SARS-CoV-2
分子名称: Nucleoprotein
著者Dhaka, P, Mahto, J.K, Tomar, S, Kumar, P.
登録日2024-07-05
公開日2025-04-02
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural insights into the RNA binding inhibitors of the C-terminal domain of the SARS-CoV-2 nucleocapsid.
J.Struct.Biol., 217, 2025
6KM8
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BU of 6km8 by Molmil
Crystal Structure of Momordica charantia 7S globulin
分子名称: 7S globulin, ACETATE ION, COPPER (II) ION
著者Kesari, P, Pratap, S, Dhankhar, P, Dalal, V, Kumar, P.
登録日2019-07-31
公開日2020-02-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.099 Å)
主引用文献Structural characterization and in-silico analysis of Momordica charantia 7S globulin for stability and ACE inhibition.
Sci Rep, 10, 2020
6LK2
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BU of 6lk2 by Molmil
Crystal structure of Providencia alcalifaciens 3-dehydroquinate synthase (DHQS) in complex with Mg2+, NAD and chlorogenic acid
分子名称: (1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid, 1,2-ETHANEDIOL, 3-dehydroquinate synthase, ...
著者Neetu, N, Katiki, M, Kumar, P.
登録日2019-12-17
公開日2020-07-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Structural and Biochemical Analyses Reveal that Chlorogenic Acid Inhibits the Shikimate Pathway.
J.Bacteriol., 202, 2020
6KMM
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BU of 6kmm by Molmil
Crystal Structure of HEPES bound Dye Decolorizing peroxidase from Bacillus subtilis
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Dhankhar, P, Dalal, V, Mahto, J.K, Kumar, P.
登録日2019-07-31
公開日2020-10-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Characterization of dye-decolorizing peroxidase from Bacillus subtilis.
Arch.Biochem.Biophys., 693, 2020
6KMN
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BU of 6kmn by Molmil
Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Deferrochelatase/peroxidase EfeB, ...
著者Dhankhar, P, Dalal, V, Mahto, J.K, Kumar, P.
登録日2019-07-31
公開日2020-10-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Characterization of dye-decolorizing peroxidase from Bacillus subtilis.
Arch.Biochem.Biophys., 693, 2020
2GET
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BU of 2get by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (LT)
分子名称: GLYCEROL, Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEU
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BU of 2geu by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (RT)
分子名称: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEV
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BU of 2gev by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (LT)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Pantothenate kinase, ...
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GES
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BU of 2ges by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (RT)
分子名称: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006

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