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7OH9
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BU of 7oh9 by Molmil
Nucleosome with TBP and TFIIA bound at SHL -6
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-09
公開日2021-07-28
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OHB
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BU of 7ohb by Molmil
TBP-nucleosome complex
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-10
公開日2021-07-28
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OHC
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BU of 7ohc by Molmil
Cryo-EM structure of nucleosome core particle composed of the Widom 601 DNA sequence
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-10
公開日2021-07-28
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OYG
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BU of 7oyg by Molmil
Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase
分子名称: RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3'), RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3'), SARS-CoV-2 RNA-dependent RNA polymerase (nsp12), ...
著者Jochheim, F.A, Tegunov, D, Hillen, H.S, Schmitzova, J, Kokic, G, Dienemann, C, Cramer, P.
登録日2021-06-24
公開日2021-08-25
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献The structure of a dimeric form of SARS-CoV-2 polymerase
Communications Biology, 4, 2021
7OZN
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BU of 7ozn by Molmil
RNA Polymerase II dimer (Class 1)
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
著者Aibara, S, Dienemann, C, Cramer, P.
登録日2021-06-28
公開日2021-10-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of an inactive RNA polymerase II dimer.
Nucleic Acids Res., 49, 2021
7OZP
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BU of 7ozp by Molmil
RNA Polymerase II dimer (Class 3)
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
著者Aibara, S, Dienemann, C, Cramer, P.
登録日2021-06-28
公開日2021-10-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of an inactive RNA polymerase II dimer.
Nucleic Acids Res., 49, 2021
7OOP
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BU of 7oop by Molmil
Pol II-CSB-CSA-DDB1-UVSSA-PAF-SPT6 (Structure 3)
分子名称: DNA damage-binding protein 1, DNA excision repair protein ERCC-6, DNA excision repair protein ERCC-8, ...
著者Kokic, G, Cramer, P.
登録日2021-05-28
公開日2021-10-06
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of human transcription-DNA repair coupling.
Nature, 598, 2021
7OO3
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BU of 7oo3 by Molmil
Pol II-CSB-CSA-DDB1-UVSSA (Structure1)
分子名称: CSB element, DNA damage-binding protein 1, DNA excision repair protein ERCC-6, ...
著者Kokic, G, Cramer, P.
登録日2021-05-26
公開日2021-10-06
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of human transcription-DNA repair coupling.
Nature, 598, 2021
7OZO
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BU of 7ozo by Molmil
RNA Polymerase II dimer (Class 2)
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
著者Aibara, S, Dienemann, C, Cramer, P.
登録日2021-06-28
公開日2021-10-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of an inactive RNA polymerase II dimer.
Nucleic Acids Res., 49, 2021
7OPD
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BU of 7opd by Molmil
Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5)
分子名称: Cullin-4A, DNA damage-binding protein 1, DNA excision repair protein ERCC-6, ...
著者Kokic, G, Cramer, P.
登録日2021-05-31
公開日2021-10-06
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of human transcription-DNA repair coupling.
Nature, 598, 2021
7OOB
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BU of 7oob by Molmil
Pol II-CSB-CSA-DDB1-UVSSA-ADPBeF3 (Structure2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA damage-binding protein 1, ...
著者Kokic, G, Cramer, P.
登録日2021-05-27
公開日2021-10-13
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis of human transcription-DNA repair coupling.
Nature, 598, 2021
7OPC
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BU of 7opc by Molmil
Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4)
分子名称: Cullin-4A, DNA damage-binding protein 1, DNA excision repair protein ERCC-6, ...
著者Kokic, G, Cramer, P.
登録日2021-05-31
公開日2021-10-13
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of human transcription-DNA repair coupling.
Nature, 598, 2021
7PF0
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BU of 7pf0 by Molmil
Trinucleosome of the 4x177 nucleosome array containing H1
分子名称: DNA (563-MER), Histone H1.4, Histone H2A type 1-B/E, ...
著者Dombrowski, M, Cramer, P.
登録日2021-08-11
公開日2022-08-03
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (11 Å)
主引用文献Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
5MY1
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BU of 5my1 by Molmil
E. coli expressome
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Kohler, R, Mooney, R.A, Mills, D.J, Kostrewa, D, Landick, R, Cramer, P.
登録日2017-01-25
公開日2017-04-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Architecture of a transcribing-translating expressome.
Science, 356, 2017
5O7X
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BU of 5o7x by Molmil
CRYSTAL STRUCTURE OF S. CEREVISIAE CORE FACTOR AT 3.2A RESOLUTION
分子名称: MAGNESIUM ION, RNA polymerase I-specific transcription initiation factor RRN11, RNA polymerase I-specific transcription initiation factor RRN6, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-06-09
公開日2017-08-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5OL9
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BU of 5ol9 by Molmil
Structure of human mitochondrial transcription elongation factor (TEFM) N-terminal domain
分子名称: ACETATE ION, Transcription elongation factor, mitochondrial
著者Hillen, H.S, Parshin, A.V, Agaronyan, K, Morozov, Y, Graber, J.J, Chernev, A, Schwinghammer, K, Urlaub, H, Anikin, M, Cramer, P, Temiakov, D.
登録日2017-07-27
公開日2017-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.302 Å)
主引用文献Mechanism of Transcription Anti-termination in Human Mitochondria.
Cell, 171, 2017
5OHQ
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BU of 5ohq by Molmil
Crystal structure of the KOW6-KOW7 domain of human DSIF
分子名称: CHLORIDE ION, SODIUM ION, Transcription elongation factor SPT5
著者Bernecky, C, Plitzko, J.M, Cramer, P.
登録日2017-07-17
公開日2017-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.098 Å)
主引用文献Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
5OIK
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BU of 5oik by Molmil
Structure of an RNA polymerase II-DSIF transcription elongation complex
分子名称: DNA (43-MER), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Bernecky, C, Plitzko, J.M, Cramer, P.
登録日2017-07-18
公開日2017-09-13
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
5OHO
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BU of 5oho by Molmil
Crystal structure of the KOWx-KOW4 domain of human DSIF
分子名称: CHLORIDE ION, GLYCEROL, Transcription elongation factor SPT5
著者Bernecky, C, Plitzko, J.M, Cramer, P.
登録日2017-07-17
公開日2017-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
5N5Y
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BU of 5n5y by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III)
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-02-14
公開日2017-04-05
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5N5Z
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BU of 5n5z by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II)
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-02-14
公開日2017-04-05
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5OT2
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BU of 5ot2 by Molmil
RNA polymerase II elongation complex in the presence of 3d-Napht-A
分子名称: 2-ethyl-7-methoxy-naphthalene, DNA non-template strand, DNA template strand, ...
著者Malvezzi, S, Farnung, L, Aloisi, C, Angelov, T, Cramer, P, Sturla, S.J.
登録日2017-08-19
公開日2017-11-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Mechanism of RNA polymerase II stalling by DNA alkylation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5OL8
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BU of 5ol8 by Molmil
Structure of human mitochondrial transcription elongation factor (TEFM) C-terminal domain
分子名称: GLYCEROL, Transcription elongation factor, mitochondrial
著者Hillen, H.S, Parshin, A.V, Agaronyan, K, Morozov, Y, Graber, J.J, Chernev, A, Schwinghammer, K, Urlaub, H, Anikin, M, Cramer, P, Temiakov, D.
登録日2017-07-27
公開日2017-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of Transcription Anti-termination in Human Mitochondria.
Cell, 171, 2017
5OQM
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BU of 5oqm by Molmil
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Urlaub, H, Cramer, P.
登録日2017-08-13
公開日2018-05-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Structures of transcription pre-initiation complex with TFIIH and Mediator.
Nature, 551, 2017
5OQJ
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BU of 5oqj by Molmil
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH
分子名称: DNA repair helicase RAD25, DNA repair helicase RAD3, DNA-directed RNA polymerase II subunit RPB1, ...
著者Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Henning, U, Cramer, P.
登録日2017-08-11
公開日2018-04-25
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structures of transcription pre-initiation complex with TFIIH and Mediator.
Nature, 551, 2017

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