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1NWR
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BU of 1nwr by Molmil
Crystal structure of human cartilage gp39 (HC-gp39)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1
著者Fusetti, F, Pijning, T, Kalk, K.H, Bos, E, Dijkstra, B.W.
登録日2003-02-06
公開日2003-08-26
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure and Carbohydrate-binding Properties of the Human Cartilage Glycoprotein-39
J.Biol.Chem., 278, 2003
1NX9
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Acetobacter turbidans alpha-amino acid ester hydrolase S205A mutant complexed with ampicillin
分子名称: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, GLYCEROL, alpha-amino acid ester hydrolase
著者Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Janssen, D.B, Dijkstra, B.W.
登録日2003-02-10
公開日2004-03-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Acetobacter turbidans {alpha}-Amino Acid Ester Hydrolase: HOW A SINGLE MUTATION IMPROVES AN ANTIBIOTIC-PRODUCING ENZYME.
J.Biol.Chem., 281, 2006
1LTM
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BU of 1ltm by Molmil
ACCELERATED X-RAY STRUCTURE ELUCIDATION OF A 36 KDA MURAMIDASE/TRANSGLYCOSYLASE USING WARP
分子名称: 1,2-ETHANEDIOL, 36 KDA SOLUBLE LYTIC TRANSGLYCOSYLASE, BICINE, ...
著者Van Asselt, E.J, Dijkstra, B.W.
登録日1997-09-26
公開日1998-11-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Accelerated X-ray structure elucidation of a 36 kDa muramidase/transglycosylase using wARP.
Acta Crystallogr.,Sect.D, 54, 1998
1OT1
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Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant D135A
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ...
著者Rozeboom, H.J, Dijkstra, B.W.
登録日2003-03-21
公開日2003-06-03
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The fully conserved Asp residue in Conserved sequence region I of the alpha-amylase Family is crucial for the Catalytic Site Architecture and Activity
Febs Lett., 541, 2003
1MPX
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ALPHA-AMINO ACID ESTER HYDROLASE LABELED WITH SELENOMETHIONINE
分子名称: CALCIUM ION, GLYCEROL, alpha-amino acid ester hydrolase
著者Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Hensgens, C.M.H, de Vries, E.J, Janssen, D.B, Dijkstra, B.W.
登録日2002-09-13
公開日2003-04-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The sequence and crystal structure of the alpha-amino acid ester hydrolase from Xanthomonas citri define a new family of beta-lactam antibiotic acylases.
J.Biol.Chem., 278, 2003
1OT2
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Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant D135N
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ...
著者Rozeboom, H.J, Dijkstra, B.W.
登録日2003-03-21
公開日2003-06-03
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The fully conserved Asp residue in Conserved sequence region I of the alpha-amylase Family is crucial for the Catalytic Site Architecture and Activity
Febs Lett., 541, 2003
1OXX
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BU of 1oxx by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
分子名称: ABC transporter, ATP binding protein, IODIDE ION
著者Verdon, G, Albers, S.-V, van Oosterwijk, N, Dijkstra, B.W, Driessen, A.J.M, Thunnissen, A.M.W.H.
登録日2003-04-03
公開日2003-09-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Formation of the productive ATP-Mg2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus
J.Mol.Biol., 334, 2003
1D0K
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THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH TWO MURODIPEPTIDES (GLCNAC-MURNAC-L-ALA-D-GLU)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE, ALANINE, ...
著者van Asselt, E.J, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-12
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.
Biochemistry, 39, 2000
1EX9
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CRYSTAL STRUCTURE OF THE PSEUDOMONAS AERUGINOSA LIPASE COMPLEXED WITH RC-(RP,SP)-1,2-DIOCTYLCARBAMOYL-GLYCERO-3-O-OCTYLPHOSPHONATE
分子名称: CALCIUM ION, LACTONIZING LIPASE, OCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER
著者Nardini, M, Lang, D.A, Liebeton, K, Jaeger, K.-E, Dijkstra, B.W.
登録日2000-05-02
公開日2000-10-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Crystal structure of pseudomonas aeruginosa lipase in the open conformation. The prototype for family I.1 of bacterial lipases.
J.Biol.Chem., 275, 2000
1D0L
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THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH BULGECIN A
分子名称: 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE, 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5-METHYLHYDROXY-L-PROLINE-TAURINE, CALCIUM ION
著者van Asselt, E.J, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-12
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.
Biochemistry, 39, 2000
1CZF
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ENDO-POLYGALACTURONASE II FROM ASPERGILLUS NIGER
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, POLYGALACTURONASE II, ZINC ION
著者van Santen, Y, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-02
公開日1999-10-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献1.68-A crystal structure of endopolygalacturonase II from Aspergillus niger and identification of active site residues by site-directed mutagenesis.
J.Biol.Chem., 274, 1999
1D0M
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BU of 1d0m by Molmil
THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH BULGECIN A AND (GLCNAC)2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE, 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5-METHYLHYDROXY-L-PROLINE-TAURINE, ...
著者van Asselt, E.J, Kalk, K.H, Dijkstra, B.W.
登録日1999-09-12
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.
Biochemistry, 39, 2000
1FP9
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STRUCTURE OF AMYLOMALTASE FROM THERMUS THERMOPHILUS HB8 IN SPACE GROUP C2
分子名称: 4-ALPHA-GLUCANOTRANSFERASE
著者Uitdehaag, J.C.M, Euverink, G.J, van der Veen, B.A, van der Maarel, M, Dijkstra, B.W.
登録日2000-08-31
公開日2003-09-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the amylomaltase from Thermus thermophilus HB8 in space group C2
To be Published
1FP8
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STRUCTURE OF THE AMYLOMALTASE FROM THERMUS THERMOPHILUS HB8 IN SPACE GROUP P21212
分子名称: 4-ALPHA-GLUCANOTRANSFERASE, CHLORIDE ION, MERCURY (II) ION
著者Uitdehaag, J.C.M, Euverink, G.J, van der Veen, B.A, van der Maarel, M, Dijkstra, B.W.
登録日2000-08-31
公開日2003-09-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and mechanism of the amylomaltase from Thermus thermophilus HB8
To be Published
1FXH
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BU of 1fxh by Molmil
MUTANT OF PENICILLIN ACYLASE IMPAIRED IN CATALYSIS WITH PHENYLACETIC ACID IN THE ACTIVE SITE
分子名称: 2-PHENYLACETIC ACID, CALCIUM ION, PENICILLIN ACYLASE
著者Alkema, W.B, Hensgens, C.M, Kroezinga, E.H, de Vries, E, Floris, R, van der Laan, J.M, Dijkstra, B.W, Janssen, D.B.
登録日2000-09-26
公開日2001-03-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Characterization of the beta-lactam binding site of penicillin acylase of Escherichia coli by structural and site-directed mutagenesis studies.
Protein Eng., 13, 2000
1FXV
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PENICILLIN ACYLASE MUTANT IMPAIRED IN CATALYSIS WITH PENICILLIN G IN THE ACTIVE SITE
分子名称: CALCIUM ION, PENICILLIN ACYLASE, PENICILLIN G
著者Alkema, W.B, Hensgens, C.M, Kroezinga, E.H, de Vries, E, Floris, R, van der Laan, J.M, Dijkstra, B.W, Janssen, D.B.
登録日2000-09-27
公開日2001-03-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Characterization of the beta-lactam binding site of penicillin acylase of Escherichia coli by structural and site-directed mutagenesis studies.
Protein Eng., 13, 2000
1QDT
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2.1 A RESOLUTION STRUCTURE OF ESCHERICHIA COLI LYTIC TRANSGLYCOYSLASE SLT35 IN COMPLEX WITH CALCIUM
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
著者van Asselt, E.J, Dijkstra, A.J.
登録日1999-07-10
公開日2000-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Binding of calcium in the EF-hand of Escherichia coli lytic transglycosylase Slt35 is important for stability.
FEBS Lett., 458, 1999
1QDR
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2.1 A RESOLUTION STRUCTURE OF ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35
分子名称: 1,2-ETHANEDIOL, BICINE, LYTIC MUREIN TRANSGLYCOSYLASE B, ...
著者van Asselt, E.J, Dijkstra, A.J.
登録日1999-07-10
公開日2000-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Binding of calcium in the EF-hand of Escherichia coli lytic transglycosylase Slt35 is important for stability.
FEBS Lett., 458, 1999
4WIN
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BU of 4win by Molmil
Crystal structure of the GATase domain from Plasmodium falciparum GMP synthetase
分子名称: GMP synthetase, NITRATE ION
著者Ballut, L, Violot, S, Haser, R, Aghajari, N.
登録日2014-09-26
公開日2015-12-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation.
Nat Commun, 6, 2015
1KB0
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Crystal Structure of Quinohemoprotein Alcohol Dehydrogenase from Comamonas testosteroni
分子名称: CALCIUM ION, GLYCEROL, HEME C, ...
著者Rozeboom, H.J, Oubrie, A.
登録日2001-11-05
公開日2001-12-28
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal structure of quinohemoprotein alcohol dehydrogenase from Comamonas testosteroni: structural basis for substrate oxidation and electron transfer.
J.Biol.Chem., 277, 2002
4WIO
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Crystal structure of the C89A GMP synthetase inactive mutant from Plasmodium falciparum in complex with glutamine
分子名称: GLUTAMINE, GMP synthetase
著者Ballut, L, Violot, S, Haser, R, Aghajari, N.
登録日2014-09-26
公開日2015-12-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Active site coupling in Plasmodium falciparum GMP synthetase is triggered by domain rotation.
Nat Commun, 6, 2015
7QZ8
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Transcriptional regulator LmrR with bound daunomycin and with Trp-67 and Trp-96 replaced by the unnatural amino acid 5,6-difluoroTrp
分子名称: DAUNOMYCIN, Transcriptional regulator, PadR-like family
著者Thunnissen, A.M.W.H.
登録日2022-01-30
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach.
J.Am.Chem.Soc., 144, 2022
7QZ7
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Transcriptional regulator LmrR with bound daunomycin and with Trp-67 and Trp-96 replaced by 5,6,7-trifluoroTrp
分子名称: DAUNOMYCIN, Transcriptional regulator, PadR-like family
著者Thunnissen, A.M.W.H.
登録日2022-01-30
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach.
J.Am.Chem.Soc., 144, 2022
7QZ6
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Transcriptional regulator LmrR with bound daunomycin and with Trp-67 and Trp-96 replaced by 5-fluoroTrp
分子名称: DAUNOMYCIN, Transcriptional regulator, PadR-like family
著者Thunnissen, A.M.W.H.
登録日2022-01-30
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach.
J.Am.Chem.Soc., 144, 2022
7QZ9
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Transcriptional regulator LmrR with Trp-67 and Trp-96 replaced by the unnatural amino acid 5,6-difluoroTrp
分子名称: Transcriptional regulator, PadR-like family
著者Thunnissen, A.M.W.H.
登録日2022-01-30
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach.
J.Am.Chem.Soc., 144, 2022

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