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1DEF
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BU of 1def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 9 STRUCTURES
Descriptor: PEPTIDE DEFORMYLASE, ZINC ION
Authors:Meinnel, T, Dardel, F.
Deposit date:1996-03-19
Release date:1997-04-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A new subclass of the zinc metalloproteases superfamily revealed by the solution structure of peptide deformylase.
J.Mol.Biol., 262, 1996
2DEF
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BU of 2def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 20 STRUCTURES
Descriptor: NICKEL (II) ION, PEPTIDE DEFORMYLASE
Authors:Meinnel, T, Dardel, F.
Deposit date:1997-12-15
Release date:1998-03-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of nickel-peptide deformylase.
J.Mol.Biol., 280, 1998
6QRM
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BU of 6qrm by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKRRAA substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, COENZYME A, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-02-19
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
5JF4
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BU of 5jf4 by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor AT019
Descriptor: (3R)-3-{3-[(1-benzofuran-3-yl)methyl]-1,2,4-oxadiazol-5-yl}-4-cyclopentyl-N-hydroxybutanamide, ACETATE ION, IMIDAZOLE, ...
Authors:Fieulaine, S, Giglione, C, Meinnel, T.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
5JF5
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BU of 5jf5 by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor AT020
Descriptor: (3R)-3-{3-[(2H-1,3-benzodioxol-5-yl)methyl]-1,2,4-oxadiazol-5-yl}-4-cyclopentyl-N-hydroxybutanamide, ACETATE ION, IMIDAZOLE, ...
Authors:Fieulaine, S, Giglione, C, Meinnel, T.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
5JF0
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BU of 5jf0 by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with tripeptide Met-Ala-Arg
Descriptor: ACETATE ION, MET-ALA-ARG, NICKEL (II) ION, ...
Authors:Fieulaine, S, Giglione, C, Meinnel, T.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
5JF2
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BU of 5jf2 by Molmil
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor AT002
Descriptor: (3R)-3-{3-[(4-fluorophenyl)methyl]-1,2,4-oxadiazol-5-yl}-N-hydroxyheptanamide, ACETATE ION, IMIDAZOLE, ...
Authors:Fieulaine, S, Giglione, C, Meinnel, T, Hamiche, K.
Deposit date:2016-04-19
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:A unique peptide deformylase platform to rationally design and challenge novel active compounds.
Sci Rep, 6, 2016
8Q26
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BU of 8q26 by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKPR inhibitor peptide
Descriptor: CHLORIDE ION, COENZYME A, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2023-08-01
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:HsNMT1 in complex with both MyrCoA and GNCFSKPR inhibitor peptide
to be published
8Q3D
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BU of 8q3d by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKPR(NH2) inhibitor peptide
Descriptor: CHLORIDE ION, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2023-08-04
Release date:2024-08-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:HsNMT1 in complex with both MyrCoA and GNCFSKPR(NH2) inhibitor peptide
to be published
8Q3S
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BU of 8q3s by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKAR inhibitor peptide
Descriptor: CHLORIDE ION, COENZYME A, GLY-ASN-CYS-PHE-SER-LYS-ALA-ARG, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2023-08-04
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:HsNMT1 in complex with both MyrCoA and GNCFSKAR inhibitor peptide
to be published
8Q23
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BU of 8q23 by Molmil
HsNMT1 in complex with both MyrCoA and Ac-D-ORN-SFSKPR inhibitor peptide
Descriptor: ACE-ORD-SER-PHE-SER-LYS-PRO-ARG, CHLORIDE ION, GLYCEROL, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2023-08-01
Release date:2024-08-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:HsNMT1 in complex with both MyrCoA and Ac-D-ORN-SFSKPR inhibitor peptide
to be published
8Q24
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BU of 8q24 by Molmil
HsNMT1 in complex with both MyrCoA and (DAB)SFSKPR inhibitor peptide
Descriptor: CHLORIDE ION, DAB-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2023-08-01
Release date:2024-08-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:HsNMT1 in complex with both MyrCoA and Dab-SFSKPR inhibitor peptide
to be published
8Q3T
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BU of 8q3t by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKPRVPTK inhibitor peptide
Descriptor: CHLORIDE ION, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2023-08-04
Release date:2024-08-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:HsNMT1 in complex with both MyrCoA and GNCFSKPR inhibitor peptide
to be published
8Q2Z
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BU of 8q2z by Molmil
HsNMT1 in complex with both MyrCoA and GNLLSKFR peptide
Descriptor: CHLORIDE ION, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2023-08-03
Release date:2024-08-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:HsNMT1 in complex with both MyrCoA and GNLLSKFR inhibitor peptide
to be published
4JE6
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BU of 4je6 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase
Descriptor: Peptide deformylase 1A, chloroplastic/mitochondrial, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
4JE8
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BU of 4je8 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase in complex with Met-Ala-Ser
Descriptor: Peptide deformylase 1A, chloroplastic/mitochondrial, ZINC ION, ...
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
4JE7
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BU of 4je7 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1A, chloroplastic/mitochondrial, ...
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
1ZXZ
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BU of 1zxz by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A); crystals grown in PEG-5000 MME as precipitant
Descriptor: Peptide deformylase, mitochondrial, ZINC ION
Authors:Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
Deposit date:2005-06-09
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
1ZY1
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BU of 1zy1 by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A) in complex with Met-Ala-Ser
Descriptor: Peptide deformylase, mitochondrial, ZINC ION, ...
Authors:Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
Deposit date:2005-06-09
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
6SK2
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BU of 6sk2 by Molmil
HsNMT1 in complex with both MyrCoA and Acetylated-GKSFSKPR peptide reveals N-terminal Lysine Myristoylation
Descriptor: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.90000653 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SKJ
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BU of 6skj by Molmil
DeltaC2 C-terminal truncation of HsNMT1 in complex with MyrCoA and GNCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-15
Release date:2020-03-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK8
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BU of 6sk8 by Molmil
DeltaC3 C-terminal truncation of HsNMT1 in complex with MyrCoA and GDCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK3
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BU of 6sk3 by Molmil
C-terminal HsNMT1 deltaC3 truncation in complex with both MyrCoA and GNCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SJZ
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BU of 6sjz by Molmil
HsNMT1 in complex with both MyrCoA and Acetylated-GNCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.995 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
1ZY0
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BU of 1zy0 by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A); crystals grown in PEG-6000
Descriptor: Peptide deformylase, mitochondrial, ZINC ION
Authors:Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
Deposit date:2005-06-09
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005

 

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