Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2JC7
DownloadVisualize
BU of 2jc7 by Molmil
The crystal structure of the carbapenemase OXA-24 reveals new insights into the mechanism of carbapenem-hydrolysis
Descriptor: BETA-LACTAMASE OXA-24, SULFATE ION
Authors:Santillana, E, Romero, A.
Deposit date:2006-12-20
Release date:2007-03-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Carbapenemase Oxa-24 Reveals Insights Into the Mechanism of Carbapenem Hydrolysis.
Proc.Natl.Acad.Sci.USA, 104, 2007
8R6M
DownloadVisualize
BU of 8r6m by Molmil
Crystal structure of Candida glabrata Bdf1 bromodomain 2 bound to I-BET151
Descriptor: 7-(3,5-DIMETHYL-1,2-OXAZOL-4-YL)-8-METHOXY-1-[(1R)-1-(PYRIDIN-2-YL)ETHYL]-1H,2H,3H-IMIDAZO[4,5-C]QUINOLIN-2-ONE, Candida glabrata strain CBS138 chromosome C complete sequence, GLYCEROL, ...
Authors:Petosa, C, Wei, K, McKenna, C.E, Govin, J.
Deposit date:2023-11-22
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Humanized Candida and NanoBiT Assays Expedite Discovery of Bdf1 Bromodomain Inhibitors with Antifungal Potential against invasive Candida infection
Advanced Science, 2024
8R6I
DownloadVisualize
BU of 8r6i by Molmil
Crystal structure of Candida glabrata Bdf1 bromodomain 1 in the unbound state
Descriptor: Candida glabrata strain CBS138 chromosome C complete sequence
Authors:Petosa, C, Wei, K, McKenna, C.E, Govin, J.
Deposit date:2023-11-22
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Humanized Candida and NanoBiT Assays Expedite Discovery of Bdf1 Bromodomain Inhibitors with Antifungal Potential against invasive Candida infection
Advanced Science, 2024
8R6K
DownloadVisualize
BU of 8r6k by Molmil
Crystal structure of Candida glabrata Bdf1 bromodomain 1 bound to a phenyltriazine ligand
Descriptor: 6-methyl-~{N}-[(5-methylfuran-2-yl)methyl]-3-(4-methylphenyl)-1,2,4-triazin-5-amine, Candida glabrata strain CBS138 chromosome C complete sequence, PHOSPHATE ION, ...
Authors:Petosa, C, Wei, K, McKenna, C.E, Govin, J.
Deposit date:2023-11-22
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Humanized Candida and NanoBiT Assays Expedite Discovery of Bdf1 Bromodomain Inhibitors with Antifungal Potential against invasive Candida infection
Advanced Science, 2024
8R6N
DownloadVisualize
BU of 8r6n by Molmil
Crystal structure of Candida glabrata Bdf1 bromodomain 2 bound to a pyridoindole ligand
Descriptor: 2-ethanoyl-~{N}-(4-morpholin-4-ylphenyl)-1,3,4,5-tetrahydropyrido[4,3-b]indole-8-carboxamide, Candida glabrata strain CBS138 chromosome C complete sequence
Authors:Petosa, C, Wei, K, McKenna, C.E, Govin, J.
Deposit date:2023-11-22
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Humanized Candida and NanoBiT Assays Expedite Discovery of Bdf1 Bromodomain Inhibitors with Antifungal Potential against invasive Candida infection
Advanced Science, 2024
8R6L
DownloadVisualize
BU of 8r6l by Molmil
Crystal structure of Candida glabrata Bdf1 bromodomain 2 in the unbound state
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Candida glabrata strain CBS138 chromosome C complete sequence, ...
Authors:Petosa, C, Wei, K, McKenna, C.E, Govin, J.
Deposit date:2023-11-22
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Humanized Candida and NanoBiT Assays Expedite Discovery of Bdf1 Bromodomain Inhibitors with Antifungal Potential against invasive Candida infection
Advanced Science, 2024
8R6J
DownloadVisualize
BU of 8r6j by Molmil
Crystal structure of Candida glabrata Bdf1 bromodomain 1 bound to a pyrazole ligand
Descriptor: 2-methyl-~{N}-[[5-(3-thiophen-2-yl-1,2,4-oxadiazol-5-yl)thiophen-2-yl]methyl]pyrazole-3-carboxamide, Candida glabrata strain CBS138 chromosome C complete sequence, SULFATE ION
Authors:Petosa, C, Wei, K, McKenna, C.E, Govin, J.
Deposit date:2023-11-22
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Humanized Candida and NanoBiT Assays Expedite Discovery of Bdf1 Bromodomain Inhibitors with Antifungal Potential against invasive Candida infection
Advanced Science, 2024
7BHD
DownloadVisualize
BU of 7bhd by Molmil
FimH in complex with alpha1,6 core-fucosylated oligomannose-3, crystallized in the trigonal space group
Descriptor: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ...
Authors:Bridot, C, Bouckaert, J, Krammer, E.-M.
Deposit date:2021-01-11
Release date:2022-07-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors.
J.Biol.Chem., 299, 2023
7QUO
DownloadVisualize
BU of 7quo by Molmil
FimH lectin domain in complex with oligomannose-6
Descriptor: FimH, NICKEL (II) ION, SULFATE ION, ...
Authors:Bouckaert, J, Bourenkov, G.P.
Deposit date:2022-01-18
Release date:2023-02-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors
J.Biol.Chem., 299, 2023
7NYL
DownloadVisualize
BU of 7nyl by Molmil
Mutant H493A of SH3 domain of JNK-interacting Protein 1 (JIP1)
Descriptor: SH3 domain of JNK-interacting Protein 1 (JIP1), TETRAETHYLENE GLYCOL, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NZD
DownloadVisualize
BU of 7nzd by Molmil
Fourth SH3 domain of POSH (Plenty of SH3 Domains protein)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase SH3RF1
Authors:Palencia, A, Bessa, L.M, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NYO
DownloadVisualize
BU of 7nyo by Molmil
Mutant A541L of SH3 domain of JNK-interacting Protein 1 (JIP1)
Descriptor: 1,2-ETHANEDIOL, SH3 domain of JNK-interacting Protein 1 (JIP1), SULFATE ION, ...
Authors:Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NZC
DownloadVisualize
BU of 7nzc by Molmil
First SH3 domain of POSH (Plenty of SH3 Domains protein)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, E3 ubiquitin-protein ligase SH3RF1
Authors:Palencia, A, Bessa, L.M, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.111 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NYK
DownloadVisualize
BU of 7nyk by Molmil
SH3 domain of JNK-interacting Protein 1 (JIP1)
Descriptor: SH3 domain of JNK-interacting Protein 1 (JIP1)
Authors:Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
Deposit date:2021-03-22
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NYM
DownloadVisualize
BU of 7nym by Molmil
Mutant V517A - SH3 domain of JNK-interacting Protein 1 (JIP1)
Descriptor: HEXAETHYLENE GLYCOL, PHOSPHATE ION, SH3 domain of JNK-interacting Protein 1 (JIP1), ...
Authors:Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.614 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NZB
DownloadVisualize
BU of 7nzb by Molmil
Mutant V517L of the SH3 domain of JNK-interacting protein 1 (JIP1)
Descriptor: PHOSPHATE ION, SH3 domain of JNK-interacting protein 1 (JIP1), TETRAETHYLENE GLYCOL
Authors:Perez, L.M, Ielasi, F.S, Jensen, M.R, Palencia, A.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.959 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
7NYN
DownloadVisualize
BU of 7nyn by Molmil
Mutant Y526A of SH3 domain of JNK-interacting Protein 1 (JIP1)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
Authors:Perez, L.M, Ielasi, F.S, Palencia, A, Jensen, M.R.
Deposit date:2021-03-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.537 Å)
Cite:Visualizing protein breathing motions associated with aromatic ring flipping.
Nature, 602, 2022
8BY3
DownloadVisualize
BU of 8by3 by Molmil
FimH lectin domain in complex with oligomannose-6
Descriptor: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ...
Authors:Bouckaert, J, Bourenkov, G.P.
Deposit date:2022-12-11
Release date:2023-04-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.186 Å)
Cite:Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors.
J.Biol.Chem., 299, 2023
8R7H
DownloadVisualize
BU of 8r7h by Molmil
Cryo-EM structure of Human SHMT1
Descriptor: Serine hydroxymethyltransferase, cytosolic
Authors:Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
Deposit date:2023-11-24
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 84, 2024
8BXY
DownloadVisualize
BU of 8bxy by Molmil
FimH in complex with alpha1,6 core-fucosylated oligomannose-3, crystallized in the trigonal space group
Descriptor: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ...
Authors:Bridot, C, Bouckaert, J, Krammer, E.-M.
Deposit date:2022-12-11
Release date:2023-04-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors.
J.Biol.Chem., 299, 2023
1A7N
DownloadVisualize
BU of 1a7n by Molmil
FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) VARIANT FOR CHAIN L GLU81->ASP AND CHAIN H LEU312->VAL
Descriptor: IGG1-KAPPA D1.3 FV (HEAVY CHAIN), IGG1-KAPPA D1.3 FV (LIGHT CHAIN)
Authors:Marks, C, Henrick, K, Winter, G.
Deposit date:1998-03-16
Release date:1998-04-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:X-Ray Structures of D1.3 Fv Mutants
To be Published
1A7P
DownloadVisualize
BU of 1a7p by Molmil
FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) ENGINEERED MUTANT PRO95L->SER ON VARIANT CHAIN L GLU81->ASP AND CHAIN H LEU312->VAL
Descriptor: ACETIC ACID, IGG1-KAPPA D1.3 FV (HEAVY CHAIN), IGG1-KAPPA D1.3 FV (LIGHT CHAIN)
Authors:Marks, C, Henrick, K, Winter, G.
Deposit date:1998-03-16
Release date:1998-04-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:X-Ray Structures of D1.3 Fv Mutants
To be Published
1A7Q
DownloadVisualize
BU of 1a7q by Molmil
FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) HIGH AFFINITY EXPRESSED VARIANT CONTAINING SER26L->GLY, ILE29L->THR, GLU81L->ASP, THR97L->SER, PRO240H->LEU, ASP258H->ALA, LYS281H->GLU, ASN283H->ASP AND LEU312H->VAL
Descriptor: IGG1-KAPPA D1.3 FV (HEAVY CHAIN), IGG1-KAPPA D1.3 FV (LIGHT CHAIN)
Authors:Marks, C, Henrick, K, Winter, G.
Deposit date:1998-03-16
Release date:1998-04-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray Structures of D1.3 Fv Mutants
To be Published
1A7O
DownloadVisualize
BU of 1a7o by Molmil
FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) R96L DELETION MUTANT ON VARIANT FOR CHAIN L GLU81->ASP AND CHAIN H LEU312->VAL
Descriptor: IGG1-KAPPA D1.3 FV (HEAVY CHAIN), IGG1-KAPPA D1.3 FV (LIGHT CHAIN)
Authors:Marks, C, Henrick, K, Winter, G.
Deposit date:1998-03-16
Release date:1998-04-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray Structures of D1.3 Fv Mutants
To be Published
6SBO
DownloadVisualize
BU of 6sbo by Molmil
Estrogen receptor mutant L536S
Descriptor: 6-(2,4-dichlorophenyl)-5-[4-[(3~{S})-1-(3-fluoranylpropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7~{H}-benzo[7]annulene-2-carboxylic acid, Estrogen receptor
Authors:Vallee, F, Steier, V, Rak, A.
Deposit date:2019-07-22
Release date:2019-11-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Discovery of 6-(2,4-Dichlorophenyl)-5-[4-[(3S)-1-(3-fluoropropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7H-benzo[7]annulene-2-carboxylic acid (SAR439859), a Potent and Selective Estrogen Receptor Degrader (SERD) for the Treatment of Estrogen-Receptor-Positive Breast Cancer.
J.Med.Chem., 63, 2020

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon