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2DEV
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BU of 2dev by Molmil
Crystal structure of tt0972 protein from Thermus Thermophilus with Cs(+) ions
Descriptor: CESIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-17
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of tt0972 protein from Thermus Thermophilus
To be Published
2DVS
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BU of 2dvs by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DJ0
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BU of 2dj0 by Molmil
The solution structure of the thioredoxin domain of human Thioredoxin-related transmembrane protein 2
Descriptor: Thioredoxin-related transmembrane protein 2
Authors:Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-30
Release date:2006-09-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the thioredoxin domain of human Thioredoxin-related transmembrane protein 2
To be Published
2DDR
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BU of 2ddr by Molmil
Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion
Descriptor: CALCIUM ION, Sphingomyelin phosphodiesterase
Authors:Ago, H, Oda, M, Takahashi, M, Tsuge, H, Ochi, S, Katunuma, N, Miyano, M, Sakurai, J, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-02
Release date:2006-05-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Basis of the Sphingomyelin Phosphodiesterase Activity in Neutral Sphingomyelinase from Bacillus cereus.
J.Biol.Chem., 281, 2006
2DEG
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BU of 2deg by Molmil
Crystal structure of tt0972 protein form Thermus Thermophilus with Mn2(+) ions
Descriptor: GLYCEROL, MANGANESE (II) ION, SODIUM ION, ...
Authors:Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-10
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of tt0972 protein form Thermus Thermophilus
To be Published
2DGB
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BU of 2dgb by Molmil
Structure of Thermus thermophilus PurS in the P21 Form
Descriptor: hypothetical protein PurS
Authors:Yanai, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-10
Release date:2006-09-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Thermus thermophilus PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be published
2DNA
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BU of 2dna by Molmil
Solution Structure of RSGI RUH-056, a UBA domain from mouse cDNA
Descriptor: unnamed protein product
Authors:Ruhul Momen, A.Z.M, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-25
Release date:2006-10-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-056, a UBA domain from mouse cDNA
To be published
2DVR
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BU of 2dvr by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DVQ
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BU of 2dvq by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: Bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DDZ
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BU of 2ddz by Molmil
Protein of Unknown Function from Pyrococcus horikoshi
Descriptor: 190aa long hypothetical protein, GLYCEROL, GUANIDINE
Authors:Rehse, P.H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-07
Release date:2007-02-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:X-ray structure of Unknown Protein from Pyrococcus horikoshi
To be Published
2DPW
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BU of 2dpw by Molmil
Hpothetical Transferase Structure from Thermus thermophilus
Descriptor: Hypothetical protein TTHA0179, SODIUM ION
Authors:Rehse, P.H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-17
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Hypothetical Transferase from Thermus thermophilus
To be Published
2EGT
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BU of 2egt by Molmil
Crystal Structure of Hypothetical protein (AQ1549) from Aquifex aeolicus
Descriptor: Hypothetical protein AQ_1549
Authors:Niwa, H, Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Hypothetical protein (AQ1549) from Aquifex aeolicus
To be Published
2EK2
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BU of 2ek2 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (E140M)
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:Asada, Y, Matsuura, Y, Tanaka, Y, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-22
Release date:2007-09-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (E140M)
To be Published
2EPI
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BU of 2epi by Molmil
Crystal Structure pf hypothetical protein MJ1052 from Methanocaldococcus jannascii (Form 2)
Descriptor: UPF0045 protein MJ1052
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure pf hypothetical protein MJ1052 from Methanocaldococcus jannascii
To be Published
2DZN
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BU of 2dzn by Molmil
Crystal structure analysis of yeast Nas6p complexed with the proteasome subunit, rpt3
Descriptor: 26S protease regulatory subunit 6B homolog, Probable 26S proteasome regulatory subunit p28
Authors:Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-29
Release date:2007-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the recognition between the regulatory particles Nas6 and Rpt3 of the yeast 26S proteasome
Biochem.Biophys.Res.Commun., 359, 2007
2E1O
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BU of 2e1o by Molmil
Solution structure of RSGI RUH-028, a homeobox domain from human cDNA
Descriptor: Homeobox protein PRH
Authors:Nakamura, A, Ohnishi, S, Abe, T, Nameki, N, Tochio, N, Koshiba, S, Kigawa, T, Yokoyama, S, Kawaii, S, Hirota, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-27
Release date:2006-11-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-028, a homeobox domain from human cDNA
To be Published
2E5J
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BU of 2e5j by Molmil
Solution structure of RNA binding domain in Methenyltetrahydrofolate synthetase domain containing
Descriptor: Methenyltetrahydrofolate synthetase domain containing
Authors:Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-21
Release date:2007-06-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RNA binding domain in Methenyltetrahydrofolate synthetase domain containing
To be Published
2E8F
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BU of 2e8f by Molmil
Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 (Oxidised form)
Descriptor: Hypothetical protein Aq_1549
Authors:Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5
To be Published
2E8R
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BU of 2e8r by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
Descriptor: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
Authors:Asada, Y, Taketa, M, Shimada, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-23
Release date:2007-07-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
To be Published
2EBS
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BU of 2ebs by Molmil
Crystal Structure Anaalysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH) D465N Mutant Complexed with a Xyloglucan Heptasaccharide
Descriptor: Oligoxyloglucan reducing end-specific cellobiohydrolase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Yaoi, K, Kondo, H, Hiyoshi, A, Noro, N, Sugimoto, H, Miyazaki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structural Basis for the Exo-mode of Action in GH74 Oligoxyloglucan Reducing End-specific Cellobiohydrolase.
J.Mol.Biol., 370, 2007
2EIU
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BU of 2eiu by Molmil
Crystal Structure of a Putative protein (AQ1627) from Aquifex aeolicus
Descriptor: Hypothetical protein aq_1627
Authors:Kumarevel, T.S, Karthe, P, Nakano, N, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-13
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a Putative protein (AQ1627) from Aquifex aeolicus
To be Published
2EJ4
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BU of 2ej4 by Molmil
Functional and structural basis of nuclear localization signal in ZIC3 zinc finger domain: a role of conserved tryptophan residue in the zinc finger domain
Descriptor: ZINC ION, Zinc finger protein ZIC 3
Authors:Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-14
Release date:2008-02-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Functional and structural basis of nuclear localization signal in ZIC3 zinc finger domain: a role of conserved tryptophan residue in the zinc finger domain
To be Published
2EC4
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BU of 2ec4 by Molmil
Solution structure of the UAS domain from human FAS-associated factor 1
Descriptor: FAS-associated factor 1
Authors:Zhang, H.P, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2008-03-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the UAS domain from human FAS-associated factor 1
To be Published
2D9U
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BU of 2d9u by Molmil
Solution structure of the Chromo domain of chromobox homolog 2 from human
Descriptor: Chromobox protein homolog 2 (isoform 2)
Authors:Li, H, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2007-01-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Chromo domain of chromobox homolog 2 from human
To be Published
2D1S
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BU of 2d1s by Molmil
Crystal structure of the thermostable Japanese Firefly Luciferase complexed with High-energy intermediate analogue
Descriptor: 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE, CHLORIDE ION, Luciferin 4-monooxygenase
Authors:Nakatsu, T, Ichiyama, S, Hiratake, J, Saldanha, A, Kobashi, N, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-08-31
Release date:2006-03-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for the spectral difference in luciferase bioluminescence.
Nature, 440, 2006

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