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2PY2
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BU of 2py2 by Molmil
Structure of Herring Type II Antifreeze Protein
Descriptor: Antifreeze protein type II, CALCIUM ION
Authors:Liu, Y, Li, Z, Lin, Q, Seetharaman, J, Sivaraman, J, Hew, C.-L.
Deposit date:2007-05-15
Release date:2007-06-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Evolutionary Origin of Ca-Dependent Herring Type II Antifreeze Protein.
PLoS ONE, 2, 2007
2Q8L
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BU of 2q8l by Molmil
Crystal structure of orotidine 5'-phosphate decarboxylase from Plasmodium falciparum
Descriptor: Orotidine-monophosphate-decarboxylase, PHOSPHATE ION
Authors:Liu, Y, Lau, W, Lew, J, Amani, M, Hui, R, Pai, E.F, Structural Genomics Consortium (SGC)
Deposit date:2007-06-11
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of orotidine 5'-phosphate decarboxylase from Plasmodium falciparum.
To be Published
3PST
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BU of 3pst by Molmil
Crystal structure of PUL and PFU(mutate) domain
Descriptor: Protein DOA1
Authors:Liu, Y, Sun, J.
Deposit date:2010-12-02
Release date:2011-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal structure of PUL and PFU(mutate) domain
To be Published
3PSP
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BU of 3psp by Molmil
Crystal structure of PUL and PFU domain
Descriptor: Protein DOA1
Authors:Liu, Y, Sun, J.
Deposit date:2010-12-02
Release date:2011-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.422 Å)
Cite:Crystal structure of PUL and PFU domain
To be Published
3Q9S
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BU of 3q9s by Molmil
Crystal structure of rra(1-215) from Deinococcus Radiodurans
Descriptor: DNA-binding response regulator
Authors:Liu, Y, Gao, Z.Q, Dong, Y.H, Ji, C.N.
Deposit date:2011-01-09
Release date:2012-01-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of rra(1-215) from Deinococcus Radiodurans
To be Published
3Q9V
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BU of 3q9v by Molmil
Crystal structure of rra c-terminal domain(123-221) from Deinococcus radiodurans
Descriptor: DNA-binding response regulator
Authors:Liu, Y, Gao, Z.Q, Dong, Y.H, Ji, C.N.
Deposit date:2011-01-10
Release date:2012-01-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.60174358 Å)
Cite:Crystal structure of rra c-terminal domain (123-221) from Deinococcus radiodurans.
To be Published
5UK2
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BU of 5uk2 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UJZ
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BU of 5ujz by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
3SGU
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BU of 3sgu by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-iodo-UMP
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-06-15
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-iodo-UMP
To be Published
5UZA
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BU of 5uza by Molmil
Adenine riboswitch aptamer domain labelled with iodo-uridine by position-selective labelling of RNA (PLOR)
Descriptor: ADENINE, MAGNESIUM ION, RNA (71-MER)
Authors:Liu, Y, Stagno, J.R, Wang, Y.-X.
Deposit date:2017-02-25
Release date:2018-02-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Incorporation of isotopic, fluorescent, and heavy-atom-modified nucleotides into RNAs by position-selective labeling of RNA.
Nat Protoc, 13, 2018
5UK0
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BU of 5uk0 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
3SSJ
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BU of 3ssj by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP
Descriptor: 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-07-08
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP
To be Published
5UK1
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BU of 5uk1 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
3SW6
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BU of 3sw6 by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-azido-UMP
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-07-13
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-azido-UMP
To be Published
3TEJ
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BU of 3tej by Molmil
Crystal structure of a domain fragment involved in peptide natural product biosynthesis
Descriptor: Enterobactin synthase component F
Authors:Liu, Y, Zheng, T, Bruner, S.D.
Deposit date:2011-08-15
Release date:2012-01-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for phosphopantetheinyl carrier domain interactions in the terminal module of nonribosomal peptide synthetases.
Chem.Biol., 18, 2011
3THQ
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BU of 3thq by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-AMINOURIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-08-19
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
To be Published
3VAC
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BU of 3vac by Molmil
Crystal Structure of the CFA/I Enterotoxigenic E. coli adhesin CfaE mutant G168D
Descriptor: CFA/I fimbrial subunit E
Authors:Liu, Y, Esser, L, Xia, D.
Deposit date:2011-12-29
Release date:2013-02-20
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Tight Conformational Coupling between the Domains of the Enterotoxigenic Escherichia coli Fimbrial Adhesin CfaE Regulates Binding State Transition.
J.Biol.Chem., 288, 2013
4ORO
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BU of 4oro by Molmil
Structure of Influenza B PB2 cap-binding domain complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Polymerase PB2
Authors:Liu, Y, Zheng, X.
Deposit date:2014-02-11
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Influenza B PB2 cap-binding domain complex with GDP
to be published
4NOX
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BU of 4nox by Molmil
Structure of the nine-bladed beta-propeller of eIF3b
Descriptor: CHLORIDE ION, Eukaryotic translation initiation factor 3 subunit B
Authors:Liu, Y, Neumann, P, Kuhle, B, Monecke, T, Ficner, R.
Deposit date:2013-11-20
Release date:2014-09-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.722 Å)
Cite:Translation initiation factor eIF3b contains a nine-bladed beta-propeller and interacts with the 40S ribosomal subunit
Structure, 22, 2014
4O62
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BU of 4o62 by Molmil
CW-type zinc finger of ZCWPW2 in complex with the amino terminus of histone H3
Descriptor: Histone H3.3, UNKNOWN ATOM OR ION, ZINC ION, ...
Authors:Liu, Y, Tempel, W, Dong, A, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-20
Release date:2014-03-26
Last modified:2016-06-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins.
J.Biol.Chem., 291, 2016
4OJI
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BU of 4oji by Molmil
Crystal Structure of Twister Ribozyme
Descriptor: MAGNESIUM ION, RNA (52-MER)
Authors:Liu, Y, Wilson, T.J, McPhee, S.A, Lilley, D.M.J.
Deposit date:2014-01-21
Release date:2014-07-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and mechanistic investigation of the twister ribozyme.
Nat.Chem.Biol., 10, 2014
4QQ4
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BU of 4qq4 by Molmil
CW-type zinc finger of MORC3 in complex with the amino terminus of histone H3
Descriptor: CHLORIDE ION, Histone H3.3, MORC family CW-type zinc finger protein 3, ...
Authors:Liu, Y, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-06-26
Release date:2014-08-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins.
J.Biol.Chem., 291, 2016
4ROJ
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BU of 4roj by Molmil
Crystal Structure of the VAV2 SH2 domain in complex with TXNIP phosphorylated peptide
Descriptor: Guanine nucleotide exchange factor VAV2, Thioredoxin-interacting protein, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-10-28
Release date:2014-12-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of the VAV2 SH2 domain in complex with TXNIP phosphorylated peptide
TO BE PUBLISHED
5YVX
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BU of 5yvx by Molmil
Crystal structure of SDG8 CW domain in complex with H3K4me1 peptide
Descriptor: H3K4me1, Histone-lysine N-methyltransferase ASHH2, ZINC ION
Authors:Liu, Y, Huang, Y.
Deposit date:2017-11-27
Release date:2018-03-14
Last modified:2018-05-09
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:Uncovering the mechanistic basis for specific recognition of monomethylated H3K4 by the CW domain ofArabidopsishistone methyltransferase SDG8.
J. Biol. Chem., 293, 2018
6JPI
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BU of 6jpi by Molmil
Crystal structure of PA4674 in complex with its operator DNA (28bp) from Pseudomonas aeruginosa
Descriptor: DNA (28-MER), HTH cro/C1-type domain-containing protein
Authors:Liu, Y, Gao, Z, Zhang, H, Dong, Y.
Deposit date:2019-03-27
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.143 Å)
Cite:Crystal structure of PA4674 in complex with its operator DNA (28bp) from Pseudomonas aeruginosa
To Be Published

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