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5U4W
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BU of 5u4w by Molmil
Cryo-EM Structure of Immature Zika Virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, E protein, M protein, ...
Authors:Mangala Prasad, V, Miller, A.S, Klose, T, Sirohi, D, Buda, G, Jiang, W, Kuhn, R.J, Rossmann, M.G.
Deposit date:2016-12-06
Release date:2017-01-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Structure of the immature Zika virus at 9 angstrom resolution.
Nat. Struct. Mol. Biol., 24, 2017
5UHY
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BU of 5uhy by Molmil
A Human Antibody Against Zika Virus Crosslinks the E Protein to Prevent Infection
Descriptor: ZV67 Fab chain 1, ZV67 Fab chain 2, envelope protein
Authors:Hasan, S.S, Miller, A, Sapparapu, G, Fernandez, E, Klose, T, Long, F, Fokine, A, Porta, J.C, Jiang, W, Diamond, M.S, Crowe Jr, J.E, Kuhn, R.J, Rossmann, M.G.
Deposit date:2017-01-12
Release date:2017-03-29
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:A human antibody against Zika virus crosslinks the E protein to prevent infection.
Nat Commun, 8, 2017
1J8S
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BU of 1j8s by Molmil
PAPG ADHESIN RECEPTOR BINDING DOMAIN-UNBOUND FORM
Descriptor: PYELONEPHRITIC ADHESIN
Authors:Dodson, K.W, Pinkner, J.S, Rose, T, Magnusson, G, Hultgren, S.J, Waksman, G.
Deposit date:2001-05-22
Release date:2001-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the interaction of the pyelonephritic E. coli adhesin to its human kidney receptor.
Cell(Cambridge,Mass.), 105, 2001
1IS0
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BU of 1is0 by Molmil
Crystal Structure of a Complex of the Src SH2 Domain with Conformationally Constrained Peptide Inhibitor
Descriptor: AY0 GLU GLU ILE peptide, Tyrosine-protein kinase transforming protein SRC
Authors:Davidson, J.P, Lubman, O, Rose, T, Waksman, G, Martin, S.F.
Deposit date:2001-11-02
Release date:2002-02-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Calorimetric and structural studies of 1,2,3-trisubstituted cyclopropanes as conformationally constrained peptide inhibitors of Src SH2 domain binding.
J.Am.Chem.Soc., 124, 2002
1J8R
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BU of 1j8r by Molmil
BINARY COMPLEX OF THE PAPG RECEPTOR-BINDING DOMAIN BOUND TO GBO4 RECEPTOR
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, PYELONEPHRITIC ADHESIN
Authors:Dodson, K.W, Pinkner, J.S, Rose, T, Magnusson, G, Hultgren, S.J, Waksman, G, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-05-22
Release date:2001-06-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of the interaction of the pyelonephritic E. coli adhesin to its human kidney receptor.
Cell(Cambridge,Mass.), 105, 2001
2D44
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BU of 2d44 by Molmil
Crystal structure of arabinofuranosidase complexed with arabinofuranosyl-alpha-1,2-xylobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-L-arabinofuranose-(1-2)-alpha-D-xylopyranose-(1-4)-alpha-D-xylopyranose, alpha-L-arabinofuranosidase B
Authors:Miyanaga, A, Koseki, T, Miwa, Y, Matsuzawa, H, Wakagi, T, Shoun, H, Fushinobu, S.
Deposit date:2005-10-07
Release date:2006-09-19
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose
Biochem.J., 399, 2006
2D43
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Crystal structure of arabinofuranosidase complexed with arabinotriose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose, alpha-L-arabinofuranosidase B
Authors:Miyanaga, A, Koseki, T, Miwa, Y, Matsuzawa, H, Wakagi, T, Shoun, H, Fushinobu, S.
Deposit date:2005-10-07
Release date:2006-09-19
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose
Biochem.J., 399, 2006
7W71
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BU of 7w71 by Molmil
Crystal structure of the PDZ-C domain of E. coli RseP in complex with 12C7 Fab
Descriptor: Heavy chain of Fab, Light chain of Fab, Regulator of sigma-E protease RseP
Authors:Hirose, T, Katagiri, S, Nogi, T.
Deposit date:2021-12-02
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
3N4N
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BU of 3n4n by Molmil
Insights into the stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido[2,3-d]pyrimidin-2-one
Descriptor: 5'-D(*CP*GP*CP*GP*AP*A)-3', 5'-D(P*TP*TP*(B7C)P*GP*CP*G)-3'
Authors:Takenaka, A, Juan, E.C.M, Shimizu, S.
Deposit date:2010-05-22
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.
Nucleic Acids Res., 2010
5VU2
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BU of 5vu2 by Molmil
Electron cryo-microscopy of "immature" Chikungunya VLP
Descriptor: E1 envelope glycoprotein, E2 envelope glycoprotein, E3 envelope glycoprotein, ...
Authors:Rossmann, M.G, Yap, M.L.
Deposit date:2017-05-18
Release date:2017-12-06
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Structural studies of Chikungunya virus maturation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6NCL
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BU of 6ncl by Molmil
Near-atomic structure of icosahedrally averaged PBCV-1 capsid
Descriptor: Major capsid protein, P1, P10, ...
Authors:Fang, Q, Rossmann, M.G.
Deposit date:2018-12-11
Release date:2019-01-30
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Near-atomic structure of a giant virus.
Nat Commun, 10, 2019
9CVG
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BU of 9cvg by Molmil
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18, DTT-treated
Descriptor: Capsid protein
Authors:Sun, C, Jiang, W.
Deposit date:2024-07-29
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (2.08 Å)
Cite:The 2.6 angstrom Structure of a Tulane Virus Variant with Minor Mutations Leading to Receptor Change.
Biomolecules, 14, 2024
9CVF
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BU of 9cvf by Molmil
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18
Descriptor: Capsid protein
Authors:Sun, C, Jiang, W.
Deposit date:2024-07-29
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The 2.6 angstrom Structure of a Tulane Virus Variant with Minor Mutations Leading to Receptor Change.
Biomolecules, 14, 2024
9CVE
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BU of 9cve by Molmil
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 5-12-18
Descriptor: Capsid protein
Authors:Sun, C, Jiang, W.
Deposit date:2024-07-29
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:The 2.6 angstrom Structure of a Tulane Virus Variant with Minor Mutations Leading to Receptor Change.
Biomolecules, 14, 2024
8H1L
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BU of 8h1l by Molmil
Crystal structure of glucose-2-epimerase in complex with D-Glucitol from Runella slithyformis Runsl_4512
Descriptor: N-acylglucosamine 2-epimerase, sorbitol
Authors:Wang, H, Sun, X.M, Saburi, W, Yu, J, Yao, M.
Deposit date:2022-10-03
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural insights into the substrate specificity and activity of a novel mannose 2-epimerase from Runella slithyformis.
Acta Crystallogr D Struct Biol, 79, 2023
8H1K
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BU of 8h1k by Molmil
Crystal structure of glucose-2-epimerase from Runella slithyformis Runsl_4512
Descriptor: FORMIC ACID, GLYCEROL, N-acylglucosamine 2-epimerase
Authors:Wang, H, Sun, X.M, Saburi, W, Yu, J, Yao, M.
Deposit date:2022-10-03
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the substrate specificity and activity of a novel mannose 2-epimerase from Runella slithyformis.
Acta Crystallogr D Struct Biol, 79, 2023
8H1M
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BU of 8h1m by Molmil
Crystal structure of glucose-2-epimerase mutant_D254A from Runella slithyformis Runsl_4512
Descriptor: FORMIC ACID, N-acylglucosamine 2-epimerase
Authors:Wang, H, Sun, X.M, Saburi, W, Yu, J, Yao, M.
Deposit date:2022-10-03
Release date:2023-07-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the substrate specificity and activity of a novel mannose 2-epimerase from Runella slithyformis.
Acta Crystallogr D Struct Biol, 79, 2023
8H1N
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BU of 8h1n by Molmil
Crystal structure of glucose-2-epimerase mutant_D254A in complex with D-Glucitol from Runella slithyformis Runsl_4512
Descriptor: FORMIC ACID, N-acylglucosamine 2-epimerase, sorbitol
Authors:Wang, H, Sun, X.M, Saburi, W, Yu, J, Yao, M.
Deposit date:2022-10-03
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural insights into the substrate specificity and activity of a novel mannose 2-epimerase from Runella slithyformis.
Acta Crystallogr D Struct Biol, 79, 2023
5H7L
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BU of 5h7l by Molmil
Complex of Elongation factor 2-50S ribosomal protein L12
Descriptor: 50S ribosomal protein L12, Elongation factor 2, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Tanzawa, T, Kato, K, Uchiumi, T, Yao, M.
Deposit date:2016-11-18
Release date:2018-02-21
Last modified:2018-05-02
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The C-terminal helix of ribosomal P stalk recognizes a hydrophobic groove of elongation factor 2 in a novel fashion
Nucleic Acids Res., 46, 2018
5H7J
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BU of 5h7j by Molmil
Crystal structure of Elongation factor 2
Descriptor: Elongation factor 2, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Tanzawa, T, Kato, K, Uchiumi, T, Yao, M.
Deposit date:2016-11-18
Release date:2018-02-21
Last modified:2018-05-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The C-terminal helix of ribosomal P stalk recognizes a hydrophobic groove of elongation factor 2 in a novel fashion
Nucleic Acids Res., 46, 2018
5H7K
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BU of 5h7k by Molmil
Crystal structure of Elongation factor 2 GDP-form
Descriptor: Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE
Authors:Tanzawa, T, Kato, K, Uchiumi, T, Yao, M.
Deposit date:2016-11-18
Release date:2018-02-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:The C-terminal helix of ribosomal P stalk recognizes a hydrophobic groove of elongation factor 2 in a novel fashion
Nucleic Acids Res., 46, 2018
3AX3
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BU of 3ax3 by Molmil
Crystal structure of rat TOM20-ALDH presequence complex: a complex (form2) between Tom20 and a disulfide-bridged presequence peptide containing D-Cys and L-Cys at the i and i+3 positions.
Descriptor: Aldehyde dehydrogenase, mitochondrial, Mitochondrial import receptor subunit TOM20 homolog
Authors:Saitoh, T, Maita, Y, Kohda, D.
Deposit date:2011-03-28
Release date:2011-07-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic snapshots of tom20-mitochondrial presequence interactions with disulfide-stabilized peptides.
Biochemistry, 50, 2011
3AX2
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BU of 3ax2 by Molmil
Crystal structure of rat TOM20-ALDH presequence complex: a disulfide-tethered complex with a non-optimized, long linker
Descriptor: Aldehyde dehydrogenase, mitochondrial, Mitochondrial import receptor subunit TOM20 homolog, ...
Authors:Saitoh, T, Maita, Y, Kohda, D.
Deposit date:2011-03-28
Release date:2011-07-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic snapshots of tom20-mitochondrial presequence interactions with disulfide-stabilized peptides.
Biochemistry, 50, 2011
3AX5
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BU of 3ax5 by Molmil
Crystal structure of rat TOM20-ALDH presequence complex: A complex (form1) between Tom20 and a disulfide-bridged presequence peptide containing D-Cys and L-Cys at the i and i+3 positions.
Descriptor: Aldehyde dehydrogenase, mitochondrial, Mitochondrial import receptor subunit TOM20 homolog, ...
Authors:Saitoh, T, Maita, Y, Kohda, D.
Deposit date:2011-03-29
Release date:2011-07-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallographic snapshots of tom20-mitochondrial presequence interactions with disulfide-stabilized peptides.
Biochemistry, 50, 2011
5WLG
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BU of 5wlg by Molmil
Crystal Structure of H-2Db with the GAP501 peptide (SQL)
Descriptor: Beta-2-microglobulin, CHLORIDE ION, GAP50 peptide, ...
Authors:Gras, S, Farenc, C, Josephs, T, Rossjohn, J.
Deposit date:2017-07-26
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A T Cell Receptor Locus Harbors a Malaria-Specific Immune Response Gene.
Immunity, 47, 2017

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PDB entries from 2024-09-11

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