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9B2C
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BU of 9b2c by Molmil
Structure of the Porcine deltacoronavirus (PDCoV) receptor-binding domain bound to the PD33 antibody Fab fragment and the Kappa light chain nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Kappa light chain nanobody, PD33 Fab heavy chain, ...
Authors:Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2024-03-14
Release date:2024-11-13
Last modified:2024-12-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Isolation and escape mapping of broadly neutralizing antibodies against emerging delta-coronaviruses.
Immunity, 57, 2024
4Q12
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BU of 4q12 by Molmil
Crystal structure of a putative uncharacterized protein Rv3404c and likely sugar N-formyltransferase from Mycobacterium tuberculosis bound to uridine diphosphate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-04-02
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a putative uncharacterized protein Rv3404c and likely sugar N-formyltransferase from Mycobacterium tuberculosis
To be Published
4PY3
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BU of 4py3 by Molmil
Crystal Structure of the N-terminal FIC domain of Bep8 protein (VirB-translocated Bartonella effector protein) from Bartonella sp. 1-1C
Descriptor: 1,2-ETHANEDIOL, Bartonella effector protein (Bep) substrate of VirB T4SS
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-03-25
Release date:2015-06-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module.
Microorganisms, 9, 2021
4F4F
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BU of 4f4f by Molmil
X-Ray crystal structure of PLP bound Threonine synthase from Brucella melitensis
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Threonine synthase
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-05-10
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-Ray crystal structure of PLP bound Threonine synthase from Brucella melitensis
TO BE PUBLISHED
9C6O
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BU of 9c6o by Molmil
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MOW15-22 RBD, ...
Authors:Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-06-07
Release date:2025-03-05
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Multiple independent acquisitions of ACE2 usage in MERS-related coronaviruses.
Cell, 188, 2025
9DAK
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BU of 9dak by Molmil
Merbecovirus PnNL2018B Spike glycoprotein RBD bound to the P. Nathusii ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-08-22
Release date:2025-02-19
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Multiple independent acquisitions of ACE2 usage in MERS-related coronaviruses.
Cell, 188, 2025
9E0I
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BU of 9e0i by Molmil
Structure of the HKU5-19s RBD bound to the Bos taurus ACE2 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2024-10-18
Release date:2025-02-19
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Molecular basis of convergent evolution of ACE2 receptor utilization among HKU5 coronaviruses.
Cell, 188, 2025
2MJ3
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BU of 2mj3 by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments and structure of Iron-sulfur cluster binding protein from Ehrlichia chaffeensis
Descriptor: Iron-sulfur cluster binding protein
Authors:Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-12-23
Release date:2014-01-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Backbone 1H, 13C, and 15N Chemical Shift Assignments and structure of Iron-sulfur cluster binding protein from Ehrlichia chaffeensis
To be Published
6C0E
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BU of 6c0e by Molmil
Crystal Structure of Isocitrate Dehydrogenase from Legionella pneumophila with bound NADPH with an alpha-ketoglutarate adduct
Descriptor: (3~{S})-3-[(4~{S})-3-aminocarbonyl-1-[(2~{R},3~{R},4~{S},5~{R})-5-[[[[(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]-4~{H}-pyridin-4-yl]-2-oxidanylidene-pentanedioic acid, CHLORIDE ION, GLYCINE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-12-29
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Isocitrate Dehydrogenase from Legionella pneumophila with bound NADPH with an ??-ketoglutarate adduct
to be published
8VYE
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BU of 8vye by Molmil
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S2L20 Heavy Chain, S2L20 Light Chain, ...
Authors:McCallum, M, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-02-08
Release date:2024-03-27
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Quantifying how single dose Ad26.COV2.S vaccine efficacy depends on Spike sequence features.
Nat Commun, 15, 2024
8VYF
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BU of 8vyf by Molmil
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, S2L20 Heavy Chain, ...
Authors:McCallum, M, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-02-08
Release date:2024-03-27
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Quantifying how single dose Ad26.COV2.S vaccine efficacy depends on Spike sequence features.
Nat Commun, 15, 2024
8W22
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BU of 8w22 by Molmil
Umb1 umbrella toxin particle (local refinement of UmbB1 bound ALF of UmbC1 and UmbA1)
Descriptor: Intein C-terminal splicing domain-containing protein, Secreted esterase, Secreted protein
Authors:Park, Y.J, Zhao, Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F, Mougous, J.D, Veesler, D.
Deposit date:2024-02-19
Release date:2024-04-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Streptomyces umbrella toxin particles block hyphal growth of competing species.
Nature, 629, 2024
8W20
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BU of 8w20 by Molmil
Umb1 umbrella toxin particle
Descriptor: Intein C-terminal splicing domain-containing protein, Secreted esterase, Secreted protein
Authors:Park, Y.J, Zhao, Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F, Mougous, J.D, Veesler, D.
Deposit date:2024-02-19
Release date:2024-04-17
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Streptomyces umbrella toxin particles block hyphal growth of competing species.
Nature, 629, 2024
8VWP
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BU of 8vwp by Molmil
Langya Virus attachment (G) glycoprotein with K85L/L86K mutation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Langya virus attachment (G) protein
Authors:Gibson, C.G, McCallum, M.M, Veesler, D.V, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-02-02
Release date:2024-05-01
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structure and design of Langya virus glycoprotein antigens.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VYG
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BU of 8vyg by Molmil
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S309 Heavy Chain, S309 Light Chain, ...
Authors:McCallum, M, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-02-08
Release date:2024-03-27
Last modified:2025-01-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Quantifying how single dose Ad26.COV2.S vaccine efficacy depends on Spike sequence features.
Nat Commun, 15, 2024
9DGO
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BU of 9dgo by Molmil
Designed miniproteins potently inhibit and protect against MERS-CoV. Crystal structure of MERS-CoV S RBD in complex with miniprotein cb3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Designed miniprotein cb_3, ...
Authors:Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-09-03
Release date:2025-06-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Designed miniproteins potently inhibit and protect against MERS-CoV.
Cell Rep, 44, 2025
4EFI
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BU of 4efi by Molmil
Crystal Structure of 3-oxoacyl-(Acyl-carrier protein) Synthase from Burkholderia Xenovorans LB400
Descriptor: 3-oxoacyl-(Acyl-carrier protein) synthase, CHLORIDE ION, FORMIC ACID, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Craig, T.K, Abendroth, J, Staker, B, Stewart, L, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-03-29
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
6E54
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BU of 6e54 by Molmil
Crystal structure of LpxC from Pseudomonas aeruginosa in complex with ligand PT802
Descriptor: (2R)-4-{4-[4-(benzyloxy)-2-fluorophenyl]-2-oxopyridin-1(2H)-yl}-N-hydroxy-2-methyl-2-(methylsulfonyl)butanamide, (2S)-4-{4-[4-(benzyloxy)-2-fluorophenyl]-2-oxopyridin-1(2H)-yl}-N-hydroxy-2-methyl-2-(methylsulfonyl)butanamide, CALCIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-07-19
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of LpxC from Pseudomonas aeruginosa in complex with ligand PT802
to be published
8U29
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BU of 8u29 by Molmil
Prefusion structure of the PRD-0038 spike glycoprotein ectodomain trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PRD-0038 Spike glycoprotein, ...
Authors:Lee, J, Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-05
Release date:2023-12-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Broad receptor tropism and immunogenicity of a clade 3 sarbecovirus.
Cell Host Microbe, 31, 2023
8U0T
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BU of 8u0t by Molmil
PRD-0038 RBD bound to Rhinolophus alcyone ACE2 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, PRD-0038, ...
Authors:Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-08-29
Release date:2023-12-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Broad receptor tropism and immunogenicity of a clade 3 sarbecovirus.
Cell Host Microbe, 31, 2023
4PZU
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BU of 4pzu by Molmil
Crystal structure of a putative uncharacterize protein Rv3404c and likely sugar N-formyltransferase from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, Uncharacterized protein Rv3404c/MT3512
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-03-31
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative uncharacterize protein Rv3404c and likely sugar N-formyltransferase from Mycobacterium tuberculosis
TO BE PUBLISHED
4QTP
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BU of 4qtp by Molmil
Crystal Structure of an Anti-sigma Factor Antagonist from Mycobacterium paratuberculosis
Descriptor: 1,2-ETHANEDIOL, Anti-sigma factor antagonist, CITRIC ACID, ...
Authors:Dranow, D.M, Clifton, M.C, Edwards, T.E, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-07-08
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of an Anti-sigma Factor Antagonist from Mycobacterium paratuberculosis
TO BE PUBLISHED
6BLA
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BU of 6bla by Molmil
Structure of AMM01 Fab, an anti EBV gH/gL neutralizing antibody
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AMM01 Fab Heavy chain, ...
Authors:Pancera, M, Weidle, C, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-11-09
Release date:2018-04-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An Antibody Targeting the Fusion Machinery Neutralizes Dual-Tropic Infection and Defines a Site of Vulnerability on Epstein-Barr Virus.
Immunity, 48, 2018
3CEZ
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BU of 3cez by Molmil
Crystal structure of methionine-R-sulfoxide reductase from Burkholderia pseudomallei
Descriptor: ACETIC ACID, Methionine-R-sulfoxide reductase, ZINC ION
Authors:Staker, B, Napuli, A, Nakazawa, S.H, Castaneda, L, Alkafeef, S, Vanvoorhis, W, Stewart, L, Myler, P, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-02-29
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Methionine-R-sulfoxide reductase from Burkholderia pseudomallei.
To be Published
8SOY
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BU of 8soy by Molmil
Cryo-EM structure of Enoyl-CoA hydratase from Mycobacterium smegmatis
Descriptor: Enoyl-CoA hydratase EchA21
Authors:Shek, R, Quispe, J, Staker, B, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-04-30
Release date:2023-05-10
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Cryo-EM structure of Enoyl-CoA hydratase from Mycobacterium smegmatis
To Be Published

238582

PDB entries from 2025-07-09

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