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7EPR
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BU of 7epr by Molmil
Partial Consensus L-threonine 3-dehydrogenase (C-Change)
Descriptor: L-threonine 3-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kozuka, K, Nakano, S, Asano, Y, Ito, S.
Deposit date:2021-04-27
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Partial Consensus Design and Enhancement of Protein Function by Secondary-Structure-Guided Consensus Mutations.
Biochemistry, 60, 2021
3WEV
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BU of 3wev by Molmil
Crystal structure of the Schiff base intermediate of L-Lys epsilon-oxidase from Marinomonas mediterranea with L-Lys
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, L-lysine 6-oxidase, ...
Authors:Okazaki, S, Nakano, S, Matsui, D, Akaji, S, Inagaki, K, Asano, Y.
Deposit date:2013-07-12
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:X-Ray crystallographic evidence for the presence of the cysteine tryptophylquinone cofactor in L-lysine {varepsilon}-oxidase from Marinomonas mediterranea
J.Biochem., 154, 2013
3WGT
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BU of 3wgt by Molmil
Crystal structure of D-amino acid oxidase mutant
Descriptor: (1R)-1-phenylethanamine, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Yasukawa, K, Nakano, S, Asano, Y.
Deposit date:2013-08-09
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Tailoring D-amino acid oxidase from the pig kidney to R-stereoselective amine oxidase and its use in the deracemization of alpha-methylbenzylamine.
Angew.Chem.Int.Ed.Engl., 53, 2014
3WMW
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BU of 3wmw by Molmil
GalE-like L-Threonine dehydrogenase from Cupriavidus necator (apo form)
Descriptor: CALCIUM ION, NAD dependent epimerase/dehydratase
Authors:Nakano, S, Okazaki, S, Tokiwa, H, Asano, Y.
Deposit date:2013-11-29
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Binding of NAD+ and L-Threonine Induces Stepwise Structural and Flexibility Changes in Cupriavidus necator L-Threonine Dehydrogenase
J.Biol.Chem., 289, 2014
3WWO
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BU of 3wwo by Molmil
S-selective hydroxynitrile lyase from Baliospermum montanum (apo1)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (S)-hydroxynitrile lyase, CALCIUM ION
Authors:Nakano, S, Dadashipour, M, Asano, Y.
Deposit date:2014-06-23
Release date:2014-10-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural and functional analysis of hydroxynitrile lyase from Baliospermum montanum with crystal structure, molecular dynamics and enzyme kinetics
Biochim.Biophys.Acta, 1844, 2014
3WEU
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BU of 3weu by Molmil
Crystal structure of the L-Lys epsilon-oxidase from Marinomonas mediterranea
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, L-lysine 6-oxidase, ...
Authors:Okazaki, S, Nakano, S, Matsui, D, Akaji, S, Inagaki, K, Asano, Y.
Deposit date:2013-07-12
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:X-Ray crystallographic evidence for the presence of the cysteine tryptophylquinone cofactor in L-lysine {varepsilon}-oxidase from Marinomonas mediterranea
J.Biochem., 154, 2013
3WWP
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BU of 3wwp by Molmil
S-selective hydroxynitrile lyase from Baliospermum montanum (apo2)
Descriptor: (S)-hydroxynitrile lyase, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Nakano, S, Dadashipour, M, Asano, Y.
Deposit date:2014-06-23
Release date:2014-10-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional analysis of hydroxynitrile lyase from Baliospermum montanum with crystal structure, molecular dynamics and enzyme kinetics
Biochim.Biophys.Acta, 1844, 2014
3WMX
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BU of 3wmx by Molmil
GalE-like L-Threonine dehydrogenase from Cupriavidus necator (holo form)
Descriptor: NAD dependent epimerase/dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, THREONINE
Authors:Nakano, S, Okazaki, S, Tokiwa, H, Asano, Y.
Deposit date:2013-11-29
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Binding of NAD+ and L-Threonine Induces Stepwise Structural and Flexibility Changes in Cupriavidus necator L-Threonine Dehydrogenase
J.Biol.Chem., 289, 2014
3X3H
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BU of 3x3h by Molmil
Crystal Structure of the Manihot esculenta Hydroxynitrile Lyase (MeHNL) 3KP (K176P, K199P, K224P) triple mutant
Descriptor: (S)-hydroxynitrile lyase
Authors:Cielo, C.B.C, Yamane, T, Asano, Y, Dadashipour, M, Suzuki, A, Mizushima, T, Komeda, H, Okazaki, S.
Deposit date:2015-01-21
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Crystallographic Studies of Manihot esculenta hydroxynitrile lyase Lysine-to-Proline mutants
TO BE PUBLISHED
2ZDU
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BU of 2zdu by Molmil
Crystal Structure of human JNK3 complexed with an isoquinolone inhibitor
Descriptor: 4-[(4-{[6-bromo-3-(methoxycarbonyl)-1-oxo-4-phenylisoquinolin-2(1H)-yl]methyl}phenyl)amino]-4-oxobutanoic acid, Mitogen-activated protein kinase 10
Authors:Sogabe, S, Ohra, T, Itoh, F, Habuka, N, Fujishima, A.
Deposit date:2007-11-27
Release date:2008-09-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery, synthesis and biological evaluation of isoquinolones as novel and highly selective JNK inhibitors (1)
Bioorg.Med.Chem., 16, 2008
7FH2
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BU of 7fh2 by Molmil
Crystal structure of the first bromodomain of BRD4 in complex with 16D10
Descriptor: Bromodomain-containing protein 4, CHLORIDE ION, N-[2-[2-[(E)-3-(2,5-dimethoxyphenyl)prop-2-enoyl]-4,5-dimethoxy-phenyl]ethyl]ethanamide
Authors:Yokoyama, T, Hirasawa, N.
Deposit date:2021-07-29
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.492 Å)
Cite:A chalcone derivative suppresses TSLP induction in mice and human keratinocytes through binding to BET family proteins.
Biochem Pharmacol, 194, 2021
6N3N
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BU of 6n3n by Molmil
Identification of novel, potent and selective GCN2 inhibitors as first-in-class anti-tumor agents
Descriptor: N-{3-[(2-aminopyrimidin-5-yl)ethynyl]-2,4-difluorophenyl}-2,5-dichloro-3-(hydroxymethyl)benzene-1-sulfonamide, eIF-2-alpha kinase GCN2,eIF-2-alpha kinase GCN2
Authors:Hoffman, I.D, Fujimoto, J, Kurasawa, O, Takagi, T, Klein, M.G, Kefala, G, Ding, S.C, Cary, D.R, Mizojiri, R.
Deposit date:2018-11-15
Release date:2019-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Identification of Novel, Potent, and Orally Available GCN2 Inhibitors with Type I Half Binding Mode.
Acs Med.Chem.Lett., 10, 2019
6N3O
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BU of 6n3o by Molmil
Identification of novel, potent and selective GCN2 inhibitors as first-in-class anti-tumor agents
Descriptor: N-{3-[(2-aminopyrimidin-5-yl)ethynyl]-2,4-difluorophenyl}-5-chloro-2-methoxypyridine-3-sulfonamide, eIF-2-alpha kinase GCN2
Authors:Hoffman, I.D, Fujimoto, J, Kurasawa, O, Takagi, T, Klein, M.G, Kefala, G, Ding, S.C, Cary, D.R, Mizojiri, R.
Deposit date:2018-11-15
Release date:2019-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of Novel, Potent, and Orally Available GCN2 Inhibitors with Type I Half Binding Mode.
Acs Med.Chem.Lett., 10, 2019
8JT7
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BU of 8jt7 by Molmil
Structure of arginine oxidase from Pseudomonas sp. TRU 7192
Descriptor: Amine oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Yamaguchi, H, Numoto, N, Suzuki, H, Nishikawa, K, Kamegawa, A, Takahashi, K, Sugiki, M, Fujiyoshi, Y.
Deposit date:2023-06-21
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:Structural basis of arginine oxidase from Pseudomonas sp. TRU 7192
To Be Published
8T8A
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BU of 8t8a by Molmil
Structure of arginine oxidase from Pseudomonas sp. TRU 7192
Descriptor: Amine oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Takahashi, K, Yamaguchi, H, Tatsumi, M, Sugiki, M.
Deposit date:2023-06-22
Release date:2024-06-26
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis of arginine oxidase from Pseudomonas sp. TRU 7192
To Be Published
6N3L
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BU of 6n3l by Molmil
Identification of novel, potent and selective GCN2 inhibitors as first-in-class anti-tumor agents
Descriptor: N-{6-[(1-methyl-2-{[4-(trifluoromethyl)phenyl]amino}-1H-benzimidazol-5-yl)oxy]pyrimidin-4-yl}cyclopropanecarboxamide, eIF-2-alpha kinase GCN2,eIF-2-alpha kinase GCN2
Authors:Hoffman, I.D, Fujimoto, J, Kurasawa, O, Takagi, T, Klein, M.G, Kefala, G, Ding, S.C, Cary, D.R, Mizojiri, R.
Deposit date:2018-11-15
Release date:2019-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Identification of Novel, Potent, and Orally Available GCN2 Inhibitors with Type I Half Binding Mode.
Acs Med.Chem.Lett., 10, 2019
5XKM
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BU of 5xkm by Molmil
Crystal structure of human phosphodiesterase 2A in complex with 6-methyl-N-(1-(4-(trifluoromethoxy)phenyl)propyl)pyrazolo[1,5-a]pyrimidine-3-carboxamide
Descriptor: 6-methyl-N-[(1R)-1-[4-(trifluoromethyloxy)phenyl]propyl]pyrazolo[1,5-a]pyrimidine-3-carboxamide, MAGNESIUM ION, ZINC ION, ...
Authors:Oki, H, Kondo, M, Snell, G, Lane, W.
Deposit date:2017-05-08
Release date:2017-08-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Discovery of an Orally Bioavailable, Brain-Penetrating, in Vivo Active Phosphodiesterase 2A Inhibitor Lead Series for the Treatment of Cognitive Disorders.
J. Med. Chem., 60, 2017
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PDB entries from 2024-06-26

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