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7B14
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BU of 7b14 by Molmil
Nanobody E bound to Spike-RBD in a localized reconstruction
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody against SARS-CoV-2, Spike protein S1
Authors:Hallberg, B.M, Das, H.
Deposit date:2020-11-23
Release date:2021-04-28
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape
Science, 371, 2021
7B18
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BU of 7b18 by Molmil
SARS-CoV-spike bound to two neutralising nanobodies
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody against SARS-CoV-2 VHH E, ...
Authors:Hallberg, B.M, Das, H.
Deposit date:2020-11-24
Release date:2021-04-28
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape.
Science, 371, 2021
1FLE
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BU of 1fle by Molmil
CRYSTAL STRUCTURE OF ELAFIN COMPLEXED WITH PORCINE PANCREATIC ELASTASE
Descriptor: ELAFIN, ELASTASE
Authors:Tsunemi, M, Matsuura, Y, Sakakibara, S, Katsube, Y.
Deposit date:1996-07-04
Release date:1997-01-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an elastase-specific inhibitor elafin complexed with porcine pancreatic elastase determined at 1.9 A resolution.
Biochemistry, 35, 1996
3VQJ
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BU of 3vqj by Molmil
Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase
Descriptor: Carbonyl sulfide hydrolase, SODIUM ION, ZINC ION
Authors:Katayama, Y, Noguchi, K, Ogawa, T, Ohtaki, A, Odaka, M, Yohda, M.
Deposit date:2012-03-24
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Carbonyl Sulfide Hydrolase from Thiobacillus thioparus Strain THI115 Is One of the beta-Carbonic Anhydrase Family Enzymes
J.Am.Chem.Soc., 135, 2013
3VRK
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BU of 3vrk by Molmil
Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase / Thiocyanate complex
Descriptor: Carbonyl sulfide hydrolase, SODIUM ION, THIOCYANATE ION, ...
Authors:Katayama, Y, Noguchi, K, Ogawa, T, Ohtaki, A, Odaka, M, Yohda, M.
Deposit date:2012-04-11
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Carbonyl Sulfide Hydrolase from Thiobacillus thioparus Strain THI115 Is One of the beta-Carbonic Anhydrase Family Enzymes
J.Am.Chem.Soc., 135, 2013
3AHN
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BU of 3ahn by Molmil
PZ PEPTIDASE A with Inhibitor 1
Descriptor: ACETATE ION, N~2~-{(2S)-3-[(R)-hydroxy{(1R)-2-phenyl-1-[(phenylacetyl)amino]ethyl}phosphoryl]-2-methylpropanoyl}-L-lysyl-D-serine, Oligopeptidase, ...
Authors:Nakano, H.
Deposit date:2010-04-25
Release date:2010-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The exquisite structure and reaction mechanism of bacterial Pz-peptidase A toward collagenous peptides: X-ray crystallographic structure analysis of PZ-peptidase a reveals differences from mammalian thimet oligopeptidase.
J.Biol.Chem., 285, 2010
3AHO
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BU of 3aho by Molmil
PZ PEPTIDASE A with inhibitor 2
Descriptor: 1-{3-[(R)-{(1R)-1-[(glycyl-L-prolyl)amino]-2-phenylethyl}(hydroxy)phosphoryl]propanoyl}-L-prolyl-D-norleucine, ACETATE ION, Oligopeptidase, ...
Authors:Nakano, H.
Deposit date:2010-04-25
Release date:2010-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The exquisite structure and reaction mechanism of bacterial Pz-peptidase A toward collagenous peptides: X-ray crystallographic structure analysis of PZ-peptidase a reveals differences from mammalian thimet oligopeptidase.
J.Biol.Chem., 285, 2010
3AHM
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BU of 3ahm by Molmil
Pz peptidase a
Descriptor: ACETATE ION, Oligopeptidase, ZINC ION
Authors:Nakano, H.
Deposit date:2010-04-25
Release date:2010-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:The exquisite structure and reaction mechanism of bacterial Pz-peptidase A toward collagenous peptides: X-ray crystallographic structure analysis of PZ-peptidase a reveals differences from mammalian thimet oligopeptidase.
J.Biol.Chem., 285, 2010
3WQ4
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BU of 3wq4 by Molmil
Crystal structure of beta-primeverosidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-primeverosidase
Authors:Saino, H.
Deposit date:2014-01-22
Release date:2014-04-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of beta-primeverosidase in complex with disaccharide amidine inhibitors.
J.Biol.Chem., 289, 2014
3WQ5
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BU of 3wq5 by Molmil
beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-phenyl-N-(6-O-beta-D-xylopyranosyl-beta-D-glucopyranosyl)ethylamidine, ...
Authors:Saino, H.
Deposit date:2014-01-22
Release date:2014-04-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of beta-primeverosidase in complex with disaccharide amidine inhibitors.
J.Biol.Chem., 289, 2014
3WQ6
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BU of 3wq6 by Molmil
beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(N-benzylsuccinimide-3-sulfanyl)-N-(6-O-beta-D-xylopyranosyl-beta-D-glucopyranosyl)butylamidine, ...
Authors:Saino, H.
Deposit date:2014-01-22
Release date:2014-04-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of beta-primeverosidase in complex with disaccharide amidine inhibitors.
J.Biol.Chem., 289, 2014
2EII
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BU of 2eii by Molmil
Crystal analysis of delta1-pyrroline-5-carboxylate dehydrogenase from Thermus thermophilus with bound L-valine and NAD.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-pyrroline-5-carboxylate dehydrogenase, ACETATE ION, ...
Authors:Inagaki, E, Sakamoto, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-13
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure analysis of delta1-pyrroline-5-carboxylate dehydrogenase in ternary complex with inhibitor and NAD.
To be Published
2EHQ
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BU of 2ehq by Molmil
Crystal analysis of 1-pyrroline-5-carboxylate dehydrogenase from thermus with bound NADP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-pyrroline-5-carboxylate dehydrogenase, ACETATE ION, ...
Authors:Inagaki, E, Sakamoto, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-07
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:New insights into the binding mode of coenzymes: structure of Thermus thermophilus Delta1-pyrroline-5-carboxylate dehydrogenase complexed with NADP+.
Acta Crystallogr.,Sect.F, 63, 2007
5XEM
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BU of 5xem by Molmil
Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum in complex with L-lanthionine-PLP Schiff base
Descriptor: (2R)-2-azanyl-3-[(2R)-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]sulfanyl-propanoic acid, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-(2-METHOXYETHOXY)ETHANOL, ...
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2017-04-05
Release date:2018-04-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum in complex with L-lanthionine-PLP Schiff base
To Be Published
5XEO
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BU of 5xeo by Molmil
Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum
Descriptor: ACETATE ION, CALCIUM ION, Cysteine synthase, ...
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2017-04-05
Release date:2018-04-11
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum
To Be Published
5XEN
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BU of 5xen by Molmil
Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum in complex with L-serine-PLP Schiff base
Descriptor: ACETATE ION, CALCIUM ION, Cysteine synthase, ...
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2017-04-05
Release date:2018-04-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum in complex with L-serine-PLP Schiff base
To Be Published
3B1E
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BU of 3b1e by Molmil
Crystal structure of betaC-S lyase from Streptococcus anginosus in complex with L-serine: alpha-Aminoacrylate form
Descriptor: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2011-06-29
Release date:2012-06-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus
Proteins, 80, 2012
3B1D
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BU of 3b1d by Molmil
Crystal structure of betaC-S lyase from Streptococcus anginosus in complex with L-serine: External aldimine form
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BetaC-S lyase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2011-06-29
Release date:2012-06-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus
Proteins, 80, 2012
3B1C
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BU of 3b1c by Molmil
Crystal structure of betaC-S lyase from Streptococcus anginosus: Internal aldimine form
Descriptor: BetaC-S lyase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2011-06-29
Release date:2012-06-27
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus
Proteins, 80, 2012
5GTQ
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BU of 5gtq by Molmil
Luciferin-regenerating enzyme at cryogenic temperature
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Luciferin regenerating enzyme, ...
Authors:Yamashita, K, Murai, T, Yamamoto, M, Gomi, K, Kajiyama, N, Kato, H, Nakatsu, T.
Deposit date:2016-08-23
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Luciferin-regenerating enzyme at cryogenic temperature
To Be Published
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