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2NWN
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BU of 2nwn by Molmil
New Pharmacophore for Serine Protease Inhibition Revealed by Crystal Structure of Human Urokinase-type Plasminogen Activator Complexed with a Cyclic Peptidyl Inhibitor, upain-1
Descriptor: Plasminogen activator, urokinase, upain-1
Authors:Zhao, G, Yuan, C, Wind, T, Andreasen, P.A, Huang, Z, Huang, M, Structural Genomics Consortium (SGC)
Deposit date:2006-11-16
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of specificity of a peptidyl urokinase inhibitor, upain-1
J.Struct.Biol., 160, 2007
3IJK
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BU of 3ijk by Molmil
5-OMe modified DNA 8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Zhang, W, Hassan, A.E.A, Gan, J, Huang, Z.
Deposit date:2009-08-04
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
2DLJ
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BU of 2dlj by Molmil
2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC
Descriptor: 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3'
Authors:Jiang, J, Huang, Z.
Deposit date:2006-04-19
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Selenium derivatization of nucleic acids for crystallography.
Nucleic Acids Res., 35, 2007
5WJR
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BU of 5wjr by Molmil
High resolution native hexamer DNA and RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*TP*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Huang, Z.
Deposit date:2017-07-24
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5W7O
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BU of 5w7o by Molmil
2-Se-T4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*TP*GP*(US3)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Yang, F, Huang, Z.
Deposit date:2017-06-20
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:2-Se-T-modified-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
To Be Published
2FJ2
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BU of 2fj2 by Molmil
Crystal Structure of Viral Macrophage Inflammatory Protein-II
Descriptor: Viral macrophage inflammatory protein-II
Authors:Li, Y, Liu, D, Cao, R, Kumar, S, Dong, C.Z, wilson, S.R, Gao, Y.G, Huang, Z.
Deposit date:2005-12-30
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of chemically synthesized vMIP-II.
Proteins, 67, 2007
3LTU
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BU of 3ltu by Molmil
5-SeMe-dU containing DNA 8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(T5S)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z.
Deposit date:2010-02-16
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5W7N
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BU of 5w7n by Molmil
2-Se-T2/4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*(US3)P*GP*(US3)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Yang, F, Huang, Z.
Deposit date:2017-06-20
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:2-Se-T2/4-modified-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
To Be Published
5USA
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BU of 5usa by Molmil
5-Se-T2-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*(T5S)P*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Qin, L, Huang, Z.
Deposit date:2017-02-13
Release date:2017-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5USE
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BU of 5use by Molmil
5-Se-T4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*TP*GP*(T5S)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Qin, L, Huang, Z.
Deposit date:2017-02-13
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5USG
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BU of 5usg by Molmil
5-Se-T2/4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*(T5S)P*GP*(T5S)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Qin, L, Huang, Z.
Deposit date:2017-02-13
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5US2
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BU of 5us2 by Molmil
2-Se-T2-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*(US3)P*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Yang, F, Huang, Z.
Deposit date:2017-02-13
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:2-Se-T-modified-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
To Be Published
2FHT
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BU of 2fht by Molmil
Crystal Structure of Viral Macrophage Inflammatory Protein-II
Descriptor: Viral macrophage inflammatory protein-II
Authors:Li, Y, Liu, D, Cao, R, Kumar, S, Dong, C.Z, wilson, S.R, Gao, Y.G, Huang, Z.
Deposit date:2005-12-27
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of chemically synthesized vMIP-II.
Proteins, 67, 2007
2GPX
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BU of 2gpx by Molmil
2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC
Descriptor: 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3', BARIUM ION
Authors:Jiang, J, Huang, Z.
Deposit date:2006-04-18
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Selenium derivatization of nucleic acids for crystallography.
Nucleic Acids Res., 35, 2007
2H05
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BU of 2h05 by Molmil
Br Derivitation of A-DNA Octamer GTG(Ubr)ACAC
Descriptor: 5'-D(*GP*TP*GP*(BRU)P*AP*CP*AP*C)-3'
Authors:Jiang, J, Sheng, J, Huang, Z.
Deposit date:2006-05-14
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Selenium derivatization of nucleic acids for crystallography.
Nucleic Acids Res., 35, 2007
2HC7
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BU of 2hc7 by Molmil
2'-selenium-T A-DNA [G(TSe)GTACAC]
Descriptor: 5'-D(*GP*(2ST)P*GP*TP*AP*CP*AP*C)-3'
Authors:Jiang, J, Sheng, J, Huang, Z.
Deposit date:2006-06-15
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of 2'-Selenium modified T A-DNA G(TSe)GTACAC
TO BE PUBLISHED
1Q4T
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BU of 1q4t by Molmil
crystal structure of 4-hydroxybenzoyl CoA thioesterase from Arthrobacter sp. strain SU complexed with 4-hydroxyphenyl CoA
Descriptor: 1,2-ETHANEDIOL, 4-HYDROXYPHENACYL COENZYME A, CHLORIDE ION, ...
Authors:Thoden, J.B, Zhuang, Z, Dunaway-Mariano, D, Holden, H.M.
Deposit date:2003-08-04
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. strain SU
J.Biol.Chem., 278, 2003
1Q4U
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BU of 1q4u by Molmil
Crystal structure of 4-hydroxybenzoyl CoA thioesterase from arthrobacter sp. strain SU complexed with 4-hydroxybenzyl CoA
Descriptor: 1,2-ETHANEDIOL, 4-HYDROXYBENZYL COENZYME A, Thioesterase
Authors:Thoden, J.B, Zhuang, Z, Dunaway-Mariano, D, Holden, H.M.
Deposit date:2003-08-04
Release date:2003-09-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. strain SU
J.Biol.Chem., 278, 2003
1Q4S
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BU of 1q4s by Molmil
Crystal structure of Arthrobacter sp. strain SU 4-hydroxybenzoyl CoA thioesterase complexed with CoA and 4-hydroxybenzoic acid
Descriptor: COENZYME A, P-HYDROXYBENZOIC ACID, Thioesterase
Authors:Thoden, J.B, Zhuang, Z, Dunaway-Mariano, D, Holden, H.M.
Deposit date:2003-08-04
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Structure of 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. strain SU
J.Biol.Chem., 278, 2003
8J7S
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BU of 8j7s by Molmil
Structure of the SPARTA complex
Descriptor: DNA (5'-D(P*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*CP*AP*AP*TP*AP*GP*A)-3'), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*A)-3'), ...
Authors:Guo, M, Zhu, Y, Lin, Z, Huang, Z.
Deposit date:2023-04-28
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Cryo-EM structure of the ssDNA-activated SPARTA complex.
Cell Res., 33, 2023
6D54
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BU of 6d54 by Molmil
Low Temperature joint X-ray/neutron structure of DNA oligonucleotide d(GTGGCCAC)2 with 2'-SeCH3 modification on Cyt5
Descriptor: DNA (5'-D(*GP*TP*GP*GP*(CSL)P*CP*AP*C)-3'), MAGNESIUM ION
Authors:Kovalevsky, A, Huang, Z, Vandavasi, V.G.
Deposit date:2018-04-19
Release date:2018-10-17
Last modified:2023-10-04
Method:NEUTRON DIFFRACTION (1.65 Å), X-RAY DIFFRACTION
Cite:Temperature-Induced Replacement of Phosphate Proton with Metal Ion Captured in Neutron Structures of A-DNA.
Structure, 26, 2018
6D4L
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BU of 6d4l by Molmil
Joint X-ray/neutron structure of DNA oligonucleotide d(GTGGCCAC)2 with 2'-SeCH3 modification on Cyt5
Descriptor: DNA (5'-D(*GP*TP*GP*GP*(CSL)P*CP*AP*C)-3'), MAGNESIUM ION
Authors:Kovalevsky, A, Huang, Z, Vandavasi, V.G.
Deposit date:2018-04-18
Release date:2018-10-17
Last modified:2023-10-04
Method:NEUTRON DIFFRACTION (1.56 Å), X-RAY DIFFRACTION
Cite:Temperature-Induced Replacement of Phosphate Proton with Metal Ion Captured in Neutron Structures of A-DNA.
Structure, 26, 2018
3HGA
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BU of 3hga by Molmil
Crystal Structure of 4-Se-Uridine Derivatized RNA
Descriptor: 5'-R(*UP*(US5)P*CP*GP*CP*G)-3'
Authors:Sheng, J, Soares, A, Huang, Z.
Deposit date:2009-05-13
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Oxygen Replacement with Selenium at the Uridine 4-Position for RNA Structure Study and Visualization
To be Published
3HGD
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BU of 3hgd by Molmil
Crystal Structure of 2-Se-Thymidine Derivatized DNA
Descriptor: 5'-D(*GP*(UMS)P*GP*(US3)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Hassan, A.E, Zhang, W, Huang, Z.
Deposit date:2009-05-13
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:High fidelity of base pairing by 2-selenothymidine in DNA.
J.Am.Chem.Soc., 132, 2010
3FA1
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BU of 3fa1 by Molmil
Crystal Structure of Tellurium Derivatized DNA
Descriptor: 5'-D(*DGP*(UMS)P*DGP*(TTI)P*DAP*DCP*DAP*DC)-3'
Authors:Sheng, J, Tatsuya, M, Hassan, A.E, Huang, Z.
Deposit date:2008-11-14
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Tellurium Derivatized DNA
To be Published

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